RNA–Protein interactions for RNA: ENST00000498274.5

PCNP-207, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2

Gene PCNP, Length 786 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-207ENST00000498274 ITGAEP38570 1179 aa28.51■■■□□ 2.15
PCNP-207ENST00000498274 PPARGC1BQ86YN6 1023 aaKnown RBP28.5■■■□□ 2.15
PCNP-207ENST00000498274 RPRD2Q5VT52 1461 aaKnown RBP28.5■■■□□ 2.15
PCNP-207ENST00000498274 FAM135BQ49AJ0 1406 aa28.5■■■□□ 2.15
PCNP-207ENST00000498274 NUTM2DQ5VT03 806 aaPredicted RBP28.49■■■□□ 2.15
PCNP-207ENST00000498274 RIMS2Q9UQ26 1411 aa28.49■■■□□ 2.15
PCNP-207ENST00000498274 ZFYVE9O95405 1425 aa28.46■■■□□ 2.15
PCNP-207ENST00000498274 RGS17Q9UGC6 210 aaPredicted RBP28.45■■■□□ 2.14
PCNP-207ENST00000498274 PLEKHG1Q9ULL1 1385 aa28.45■■■□□ 2.14
PCNP-207ENST00000498274 HDGFP51858 240 aaKnown RBP28.43■■■□□ 2.14
PCNP-207ENST00000498274 NKTRP30414 1462 aaKnown RBP28.42■■■□□ 2.14
PCNP-207ENST00000498274 MSH6P52701 1360 aa28.42■■■□□ 2.14
PCNP-207ENST00000498274 NWD1Q149M9 1564 aa28.41■■■□□ 2.14
PCNP-207ENST00000498274 GCC2Q8IWJ2 1684 aa28.41■■■□□ 2.14
PCNP-207ENST00000498274 UNC13BO14795 1591 aa28.41■■■□□ 2.14
PCNP-207ENST00000498274 TMEM131LA2VDJ0 1609 aa28.4■■■□□ 2.14
PCNP-207ENST00000498274 MYO5BQ9ULV0 1848 aa28.39■■■□□ 2.13
PCNP-207ENST00000498274 ROBO1Q9Y6N7 1651 aa28.38■■■□□ 2.13
PCNP-207ENST00000498274 NUP155O75694 1391 aa28.38■■■□□ 2.13
PCNP-207ENST00000498274 ROCK1Q13464 1354 aa28.38■■■□□ 2.13
PCNP-207ENST00000498274 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.38■■■□□ 2.13
PCNP-207ENST00000498274 SLAIN2Q9P270 581 aa28.38■■■□□ 2.13
PCNP-207ENST00000498274 TBX22Q9Y458 520 aa28.36■■■□□ 2.13
PCNP-207ENST00000498274 C14orf37Q86TY3 774 aa28.35■■■□□ 2.13
PCNP-207ENST00000498274 E9PCH4 1651 aa28.35■■■□□ 2.13
PCNP-207ENST00000498274 ADAMTS13Q76LX8 1427 aa28.31■■■□□ 2.12
PCNP-207ENST00000498274 POTEAQ6S8J7 498 aa28.3■■■□□ 2.12
PCNP-207ENST00000498274 IQGAP3Q86VI3 1631 aa28.29■■■□□ 2.12
PCNP-207ENST00000498274 CHD2O14647 1828 aaKnown RBP28.28■■■□□ 2.12
PCNP-207ENST00000498274 AMOTL2Q9Y2J4 779 aa28.23■■■□□ 2.11
PCNP-207ENST00000498274 ZNF326Q5BKZ1 582 aaKnown RBP28.22■■■□□ 2.11
PCNP-207ENST00000498274 PHLPP1O60346 1717 aa28.21■■■□□ 2.11
PCNP-207ENST00000498274 JCADQ9P266 1359 aa28.21■■■□□ 2.11
PCNP-207ENST00000498274 PTPRUQ92729 1446 aa28.2■■■□□ 2.11
PCNP-207ENST00000498274 ATF3P18847 181 aa28.2■■■□□ 2.1
PCNP-207ENST00000498274 NCOA3Q9Y6Q9 1424 aa28.19■■■□□ 2.1
PCNP-207ENST00000498274 C19orf44Q9H6X5 657 aa28.19■■■□□ 2.1
PCNP-207ENST00000498274 PIK3R4Q99570 1358 aa28.19■■■□□ 2.1
PCNP-207ENST00000498274 CADPS2Q86UW7 1296 aa28.18■■■□□ 2.1
PCNP-207ENST00000498274 DIP2AQ14689 1571 aa28.18■■■□□ 2.1
PCNP-207ENST00000498274 TRPM2O94759 1503 aa28.16■■■□□ 2.1
PCNP-207ENST00000498274 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.12■■■□□ 2.09
PCNP-207ENST00000498274 COL16A1Q07092 1604 aaPredicted RBP28.12■■■□□ 2.09
PCNP-207ENST00000498274 MEX3CQ5U5Q3 659 aaKnown RBP28.1■■■□□ 2.09
PCNP-207ENST00000498274 BRINP3Q76B58 766 aa28.09■■■□□ 2.09
PCNP-207ENST00000498274 METP08581 1390 aa28.08■■■□□ 2.09
PCNP-207ENST00000498274 LRP6O75581 1613 aa28.07■■■□□ 2.08
PCNP-207ENST00000498274 SPHKAPQ2M3C7 1700 aa28.07■■■□□ 2.08
PCNP-207ENST00000498274 NRXN3Q9Y4C0 1643 aa28.07■■■□□ 2.08
PCNP-207ENST00000498274 SPATA31A6Q5VVP1 1343 aa28.05■■■□□ 2.08
PCNP-207ENST00000498274 SETBP1Q9Y6X0 1596 aa28.03■■■□□ 2.08
PCNP-207ENST00000498274 NUTM2BA6NNL0 878 aaPredicted RBP28.03■■■□□ 2.08
PCNP-207ENST00000498274 NUTM2EB1AL46 878 aaPredicted RBP28.03■■■□□ 2.08
PCNP-207ENST00000498274 NUTM2AQ8IVF1 878 aaPredicted RBP28.03■■■□□ 2.08
PCNP-207ENST00000498274 TRIM52Q96A61 297 aa28.03■■■□□ 2.08
PCNP-207ENST00000498274 AHDC1Q5TGY3 1603 aaPredicted RBP28.03■■■□□ 2.08
PCNP-207ENST00000498274 NAIPQ13075 1403 aa28.01■■■□□ 2.08
PCNP-207ENST00000498274 CLTCL1P53675 1640 aa28.01■■■□□ 2.07
PCNP-207ENST00000498274 RRBP1Q9P2E9 1410 aaKnown RBP28.01■■■□□ 2.07
PCNP-207ENST00000498274 XRN1Q8IZH2 1706 aaKnown RBP27.99■■■□□ 2.07
PCNP-207ENST00000498274 DDX17Q92841 729 aaKnown RBP27.98■■■□□ 2.07
PCNP-207ENST00000498274 NEXMIFQ5QGS0 1516 aa27.97■■■□□ 2.07
PCNP-207ENST00000498274 DCCP43146 1447 aa27.97■■■□□ 2.07
PCNP-207ENST00000498274 MST1RQ04912 1400 aa27.97■■■□□ 2.07
PCNP-207ENST00000498274 SETD1AO15047 1707 aaKnown RBP27.96■■■□□ 2.07
PCNP-207ENST00000498274 ASXL1Q8IXJ9 1541 aa27.96■■■□□ 2.07
PCNP-207ENST00000498274 ZNF772Q68DY9 489 aaPredicted RBP27.95■■■□□ 2.06
PCNP-207ENST00000498274 ADGRL3Q9HAR2 1447 aa27.92■■■□□ 2.06
PCNP-207ENST00000498274 SHPRHQ149N8 1683 aa27.91■■■□□ 2.06
PCNP-207ENST00000498274 SLC4A1APQ9BWU0 796 aaKnown RBP27.91■■■□□ 2.06
PCNP-207ENST00000498274 VGFO15240 615 aaPredicted RBP27.88■■■□□ 2.05
PCNP-207ENST00000498274 SETD5Q9C0A6 1442 aa27.87■■■□□ 2.05
PCNP-207ENST00000498274 FOXD1Q16676 465 aa27.87■■■□□ 2.05
PCNP-207ENST00000498274 LRRC59Q96AG4 307 aaKnown RBP27.87■■■□□ 2.05
PCNP-207ENST00000498274 HFM1A2PYH4 1435 aa27.85■■■□□ 2.05
PCNP-207ENST00000498274 RXRBP28702 533 aa27.85■■■□□ 2.05
PCNP-207ENST00000498274 AFF2P51816 1311 aa27.85■■■□□ 2.05
PCNP-207ENST00000498274 ROBO2Q9HCK4 1378 aa27.85■■■□□ 2.05
PCNP-207ENST00000498274 KIF1BO60333 1816 aa27.84■■■□□ 2.05
PCNP-207ENST00000498274 NALCNQ8IZF0 1738 aa27.83■■■□□ 2.05
PCNP-207ENST00000498274 C8orf37Q96NL8 207 aa27.82■■■□□ 2.04
PCNP-207ENST00000498274 C1orf167Q5SNV9 1468 aa27.82■■■□□ 2.04
PCNP-207ENST00000498274 ORAI2Q96SN7 254 aa27.81■■■□□ 2.04
PCNP-207ENST00000498274 PNPLA6Q8IY17 1366 aa27.81■■■□□ 2.04
PCNP-207ENST00000498274 NHSL1Q5SYE7 1610 aa27.81■■■□□ 2.04
PCNP-207ENST00000498274 RPGRIP1LQ68CZ1 1315 aa27.8■■■□□ 2.04
PCNP-207ENST00000498274 UPF1Q92900 1129 aaKnown RBP eCLIP27.79■■■□□ 2.04
PCNP-207ENST00000498274 PTCH1Q13635 1447 aa27.78■■■□□ 2.04
PCNP-207ENST00000498274 ADAMTS2O95450 1211 aa27.77■■■□□ 2.04
PCNP-207ENST00000498274 RGL3Q3MIN7 710 aa27.74■■■□□ 2.03
PCNP-207ENST00000498274 ADGRF5Q8IZF2 1346 aa27.72■■■□□ 2.03
PCNP-207ENST00000498274 QTRT2Q9H974 415 aaKnown RBP27.72■■■□□ 2.03
PCNP-207ENST00000498274 NGLY1Q96IV0 654 aa27.71■■■□□ 2.03
PCNP-207ENST00000498274 STK26Q9P289 416 aa27.71■■■□□ 2.03
PCNP-207ENST00000498274 SOS2Q07890 1332 aaPredicted RBP27.68■■■□□ 2.02
PCNP-207ENST00000498274 ESCO1Q5FWF5 840 aa27.67■■■□□ 2.02
PCNP-207ENST00000498274 PPLO60437 1756 aa27.67■■■□□ 2.02
PCNP-207ENST00000498274 CCDC144AA2RUR9 1427 aa27.67■■■□□ 2.02
PCNP-207ENST00000498274 NUTM2FA1L443 756 aa27.66■■■□□ 2.02
PCNP-207ENST00000498274 WAPLQ7Z5K2 1190 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms