RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 EVC2Q86UK5 1308 aa18.56■□□□□ 0.56
C4A-259ENST00000498271 SYNJ2O15056 1496 aa18.56■□□□□ 0.56
C4A-259ENST00000498271 MRE11P49959 708 aa18.56■□□□□ 0.56
C4A-259ENST00000498271 GNL2Q13823 731 aaKnown RBP18.56■□□□□ 0.56
C4A-259ENST00000498271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.56■□□□□ 0.56
C4A-259ENST00000498271 NFKBIBQ15653 356 aa18.56■□□□□ 0.56
C4A-259ENST00000498271 TROQ12816 1431 aaPredicted RBP18.56■□□□□ 0.56
C4A-259ENST00000498271 NAIPQ13075 1403 aa18.56■□□□□ 0.56
C4A-259ENST00000498271 SLC4A3P48751 1232 aa18.56■□□□□ 0.56
C4A-259ENST00000498271 KIAA1107Q9UPP5 1409 aa18.56■□□□□ 0.56
C4A-259ENST00000498271 GPS2Q13227 327 aa18.55■□□□□ 0.56
C4A-259ENST00000498271 DAPK1P53355 1430 aa18.55■□□□□ 0.56
C4A-259ENST00000498271 PKNOX2Q96KN3 472 aa18.55■□□□□ 0.56
C4A-259ENST00000498271 ARHGAP5Q13017 1502 aa18.55■□□□□ 0.56
C4A-259ENST00000498271 NGEFQ8N5V2 710 aa18.54■□□□□ 0.56
C4A-259ENST00000498271 STAC3Q96MF2 364 aa18.54■□□□□ 0.56
C4A-259ENST00000498271 BRD4O60885 1362 aaPredicted RBP18.54■□□□□ 0.56
C4A-259ENST00000498271 MAP3K1Q13233 1512 aa18.54■□□□□ 0.56
C4A-259ENST00000498271 FAM13BQ9NYF5 915 aa18.54■□□□□ 0.56
C4A-259ENST00000498271 CSB-PGBD3P0DP91 1061 aa18.53■□□□□ 0.56
C4A-259ENST00000498271 C9orf84Q5VXU9 1444 aa18.53■□□□□ 0.56
C4A-259ENST00000498271 BCL2L13Q9BXK5 485 aa18.53■□□□□ 0.56
C4A-259ENST00000498271 EPRSP07814 1512 aaKnown RBP18.52■□□□□ 0.56
C4A-259ENST00000498271 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.56
C4A-259ENST00000498271 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.56
C4A-259ENST00000498271 PAK3O75914 559 aaPredicted RBP18.51■□□□□ 0.55
C4A-259ENST00000498271 AAMPQ13685 434 aa18.51■□□□□ 0.55
C4A-259ENST00000498271 HDAC5Q9UQL6 1122 aa18.51■□□□□ 0.55
C4A-259ENST00000498271 CDK13Q14004 1512 aaKnown RBP18.51■□□□□ 0.55
C4A-259ENST00000498271 TEX35Q5T0J7 233 aa18.51■□□□□ 0.55
C4A-259ENST00000498271 KIF3AQ9Y496 699 aa18.51■□□□□ 0.55
C4A-259ENST00000498271 LMOD3Q0VAK6 560 aa18.5■□□□□ 0.55
C4A-259ENST00000498271 FOXD4L1Q9NU39 408 aa18.49■□□□□ 0.55
C4A-259ENST00000498271 CUL7Q14999 1698 aa18.49■□□□□ 0.55
C4A-259ENST00000498271 GPATCH3Q96I76 525 aa18.49■□□□□ 0.55
C4A-259ENST00000498271 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
C4A-259ENST00000498271 COG6Q9Y2V7 657 aa18.48■□□□□ 0.55
C4A-259ENST00000498271 NOC3LQ8WTT2 800 aaKnown RBP18.48■□□□□ 0.55
C4A-259ENST00000498271 MINK1Q8N4C8 1332 aaPredicted RBP18.47■□□□□ 0.55
C4A-259ENST00000498271 CHMP4CQ96CF2 233 aa18.47■□□□□ 0.55
C4A-259ENST00000498271 AFAP1Q8N556 730 aa18.47■□□□□ 0.55
C4A-259ENST00000498271 STK31Q9BXU1 1019 aa18.46■□□□□ 0.55
C4A-259ENST00000498271 NBPF1Q3BBV0 1214 aa18.46■□□□□ 0.55
C4A-259ENST00000498271 ZKSCAN2Q63HK3 967 aa18.46■□□□□ 0.55
C4A-259ENST00000498271 TPM3P06753 285 aa18.46■□□□□ 0.55
C4A-259ENST00000498271 ISY1Q9ULR0 285 aaKnown RBP18.46■□□□□ 0.55
C4A-259ENST00000498271 MEX3CQ5U5Q3 659 aaKnown RBP18.45■□□□□ 0.54
C4A-259ENST00000498271 NUCB2P80303 420 aa18.45■□□□□ 0.54
C4A-259ENST00000498271 IQGAP2Q13576 1575 aa18.45■□□□□ 0.54
C4A-259ENST00000498271 GOLGA6L19H0YKK7 550 aa18.45■□□□□ 0.54
C4A-259ENST00000498271 KIAA0586Q9BVV6 1533 aa18.45■□□□□ 0.54
C4A-259ENST00000498271 TAOK2Q9UL54 1235 aa18.45■□□□□ 0.54
C4A-259ENST00000498271 ROCK1Q13464 1354 aa18.45■□□□□ 0.54
C4A-259ENST00000498271 NUTM2FA1L443 756 aa18.44■□□□□ 0.54
C4A-259ENST00000498271 DIAPH3Q9NSV4 1193 aa18.44■□□□□ 0.54
C4A-259ENST00000498271 LAMC3Q9Y6N6 1575 aa18.43■□□□□ 0.54
C4A-259ENST00000498271 TRIM6-TRIM34B2RNG4 842 aa18.43■□□□□ 0.54
C4A-259ENST00000498271 NGDNQ8NEJ9 315 aaKnown RBP18.43■□□□□ 0.54
C4A-259ENST00000498271 CCDC39Q9UFE4 941 aa18.43■□□□□ 0.54
C4A-259ENST00000498271 ADAMTS8Q9UP79 889 aa18.43■□□□□ 0.54
C4A-259ENST00000498271 ANO8Q9HCE9 1232 aaPredicted RBP18.43■□□□□ 0.54
C4A-259ENST00000498271 PTPN23Q9H3S7 1636 aa18.42■□□□□ 0.54
C4A-259ENST00000498271 PRKCSHP14314 528 aaPredicted RBP18.42■□□□□ 0.54
C4A-259ENST00000498271 CCDC184Q52MB2 194 aa18.42■□□□□ 0.54
C4A-259ENST00000498271 RUNDC1Q96C34 613 aa18.41■□□□□ 0.54
C4A-259ENST00000498271 FAM69CQ0P6D2 419 aa18.41■□□□□ 0.54
C4A-259ENST00000498271 ELL2O00472 640 aaPredicted RBP18.41■□□□□ 0.54
C4A-259ENST00000498271 SLC4A10Q6U841 1118 aa18.41■□□□□ 0.54
C4A-259ENST00000498271 COG3Q96JB2 828 aa18.4■□□□□ 0.54
C4A-259ENST00000498271 A0A0U1RQG5 324 aaPredicted RBP18.4■□□□□ 0.54
C4A-259ENST00000498271 NOM1Q5C9Z4 860 aaKnown RBP18.4■□□□□ 0.54
C4A-259ENST00000498271 REC8O95072 547 aa18.4■□□□□ 0.54
C4A-259ENST00000498271 AMPHP49418 695 aa18.4■□□□□ 0.54
C4A-259ENST00000498271 CDCA7LQ96GN5 454 aa18.4■□□□□ 0.54
C4A-259ENST00000498271 BECN2A8MW95 431 aa18.39■□□□□ 0.53
C4A-259ENST00000498271 CFAP70Q5T0N1 1121 aa18.39■□□□□ 0.53
C4A-259ENST00000498271 RRP9O43818 475 aaKnown RBP18.39■□□□□ 0.53
C4A-259ENST00000498271 CCDC66A2RUB6 948 aa18.39■□□□□ 0.53
C4A-259ENST00000498271 DIAPH1O60610 1272 aaKnown RBP18.39■□□□□ 0.53
C4A-259ENST00000498271 PNISRQ8TF01 805 aaKnown RBP18.38■□□□□ 0.53
C4A-259ENST00000498271 PLEKHH2Q8IVE3 1493 aa18.38■□□□□ 0.53
C4A-259ENST00000498271 PPP2R1AP30153 589 aa18.38■□□□□ 0.53
C4A-259ENST00000498271 HSP90B1P14625 803 aaKnown RBP18.37■□□□□ 0.53
C4A-259ENST00000498271 ARGLU1Q9NWB6 273 aaPredicted RBP18.37■□□□□ 0.53
C4A-259ENST00000498271 NASPP49321 788 aaPredicted RBP18.37■□□□□ 0.53
C4A-259ENST00000498271 DDX19BQ9UMR2 479 aa18.37■□□□□ 0.53
C4A-259ENST00000498271 HMGN5P82970 282 aaKnown RBP18.37■□□□□ 0.53
C4A-259ENST00000498271 TMEM132EQ6IEE7 984 aa18.36■□□□□ 0.53
C4A-259ENST00000498271 HMGB2P26583 209 aaKnown RBP18.36■□□□□ 0.53
C4A-259ENST00000498271 CCDC70Q6NSX1 233 aa18.36■□□□□ 0.53
C4A-259ENST00000498271 BRPF3Q9ULD4 1205 aa18.36■□□□□ 0.53
C4A-259ENST00000498271 CCDC173Q0VFZ6 552 aa18.36■□□□□ 0.53
C4A-259ENST00000498271 AKNAQ7Z591 1439 aa18.35■□□□□ 0.53
C4A-259ENST00000498271 RIPK4P57078 832 aa18.35■□□□□ 0.53
C4A-259ENST00000498271 R3HCC1Q9Y3T6 440 aaKnown RBP18.35■□□□□ 0.53
C4A-259ENST00000498271 ANKRD30BQ9BXX2 1392 aa18.35■□□□□ 0.53
C4A-259ENST00000498271 ABCC5O15440 1437 aa18.34■□□□□ 0.53
C4A-259ENST00000498271 DZIP1LQ8IYY4 767 aaKnown RBP18.34■□□□□ 0.53
C4A-259ENST00000498271 IL27Q8NEV9 243 aa18.34■□□□□ 0.53
C4A-259ENST00000498271 ANKRD45Q5TZF3 282 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms