RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 UBTFP17480 764 aaKnown RBP6.92□□□□□ -1.3
CALD1-224ENST00000498254 PCMTD1Q96MG8 357 aaPredicted RBP6.92□□□□□ -1.3
CALD1-224ENST00000498254 PHOX2BQ99453 314 aa6.92□□□□□ -1.3
CALD1-224ENST00000498254 EPAS1Q99814 870 aa6.92□□□□□ -1.3
CALD1-224ENST00000498254 NBPF3Q9H094 633 aa6.92□□□□□ -1.3
CALD1-224ENST00000498254 PCDHGA10Q9Y5H3 936 aa6.92□□□□□ -1.3
CALD1-224ENST00000498254 ZDHHC16Q969W1 377 aa6.91□□□□□ -1.3
CALD1-224ENST00000498254 CLCN1P35523 988 aa6.9□□□□□ -1.3
CALD1-224ENST00000498254 TYW1BQ6NUM6 668 aa6.9□□□□□ -1.3
CALD1-224ENST00000498254 ADAM33Q9BZ11 813 aa6.9□□□□□ -1.3
CALD1-224ENST00000498254 GPCPD1Q9NPB8 672 aa6.9□□□□□ -1.3
CALD1-224ENST00000498254 NRG2O14511 850 aaPredicted RBP6.89□□□□□ -1.31
CALD1-224ENST00000498254 C1orf115Q9H7X2 142 aa6.89□□□□□ -1.31
CALD1-224ENST00000498254 SSTR3P32745 418 aaPredicted RBP6.88□□□□□ -1.31
CALD1-224ENST00000498254 FLIIQ13045 1269 aa6.88□□□□□ -1.31
CALD1-224ENST00000498254 PADI6Q6TGC4 694 aa6.88□□□□□ -1.31
CALD1-224ENST00000498254 TREML4Q6UXN2 200 aa6.88□□□□□ -1.31
CALD1-224ENST00000498254 CLUAP1Q96AJ1 413 aa6.88□□□□□ -1.31
CALD1-224ENST00000498254 APBB1O00213 710 aa6.87□□□□□ -1.31
CALD1-224ENST00000498254 BEGAINQ9BUH8 593 aa6.87□□□□□ -1.31
CALD1-224ENST00000498254 TMUB1Q9BVT8 246 aa6.87□□□□□ -1.31
CALD1-224ENST00000498254 GOPCQ9HD26 462 aa6.87□□□□□ -1.31
CALD1-224ENST00000498254 PPP1R3GB7ZBB8 358 aa6.86□□□□□ -1.31
CALD1-224ENST00000498254 ITGBL1O95965 494 aaPredicted RBP6.86□□□□□ -1.31
CALD1-224ENST00000498254 SH3D19Q5HYK7 790 aa6.86□□□□□ -1.31
CALD1-224ENST00000498254 ANKK1Q8NFD2 765 aa6.86□□□□□ -1.31
CALD1-224ENST00000498254 POLR3EQ9NVU0 708 aa6.86□□□□□ -1.31
CALD1-224ENST00000498254 RABGEF1Q9UJ41 708 aa6.86□□□□□ -1.31
CALD1-224ENST00000498254 ONECUT3O60422 494 aaPredicted RBP6.85□□□□□ -1.31
CALD1-224ENST00000498254 METTL3Q86U44 580 aaKnown RBP6.85□□□□□ -1.31
CALD1-224ENST00000498254 PROCA1Q8NCQ7 364 aaPredicted RBP6.85□□□□□ -1.31
CALD1-224ENST00000498254 FBXW7Q969H0 707 aa6.85□□□□□ -1.31
CALD1-224ENST00000498254 INSM1Q01101 510 aaPredicted RBP6.84□□□□□ -1.31
CALD1-224ENST00000498254 PROX2Q3B8N5 592 aa6.83□□□□□ -1.32
CALD1-224ENST00000498254 C6orf132Q5T0Z8 1188 aa6.83□□□□□ -1.32
CALD1-224ENST00000498254 FAM217BQ9NTX9 383 aaPredicted RBP6.83□□□□□ -1.32
CALD1-224ENST00000498254 ADGRG1Q9Y653 693 aa6.83□□□□□ -1.32
CALD1-224ENST00000498254 COL9A1P20849 921 aa6.82□□□□□ -1.32
CALD1-224ENST00000498254 MCM6Q14566 821 aa6.82□□□□□ -1.32
CALD1-224ENST00000498254 SKIV2LQ15477 1246 aaKnown RBP6.82□□□□□ -1.32
CALD1-224ENST00000498254 NYAP1Q6ZVC0 841 aa6.82□□□□□ -1.32
CALD1-224ENST00000498254 LAPTM4BQ86VI4 370 aa6.82□□□□□ -1.32
CALD1-224ENST00000498254 PXYLP1Q8TE99 480 aa6.82□□□□□ -1.32
CALD1-224ENST00000498254 SOWAHBA6NEL2 793 aa6.81□□□□□ -1.32
CALD1-224ENST00000498254 OATP04181 439 aa6.81□□□□□ -1.32
CALD1-224ENST00000498254 BCAMP50895 628 aa6.81□□□□□ -1.32
CALD1-224ENST00000498254 MYSM1Q5VVJ2 828 aa6.8□□□□□ -1.32
CALD1-224ENST00000498254 CCDC82Q8N4S0 544 aa6.79□□□□□ -1.32
CALD1-224ENST00000498254 CERKQ8TCT0 537 aa6.79□□□□□ -1.32
CALD1-224ENST00000498254 POM121Q96HA1 1249 aa6.79□□□□□ -1.32
CALD1-224ENST00000498254 ZFRQ96KR1 1074 aaKnown RBP6.79□□□□□ -1.32
CALD1-224ENST00000498254 KIAA1468Q9P260 1216 aa6.79□□□□□ -1.32
CALD1-224ENST00000498254 TRAK2O60296 914 aa6.78□□□□□ -1.32
CALD1-224ENST00000498254 CLK2P49760 499 aaKnown RBP6.78□□□□□ -1.32
CALD1-224ENST00000498254 KCNC4Q03721 635 aa6.78□□□□□ -1.32
CALD1-224ENST00000498254 CDCA7LQ96GN5 454 aa6.78□□□□□ -1.32
CALD1-224ENST00000498254 TBC1D2Q9BYX2 928 aa6.78□□□□□ -1.32
CALD1-224ENST00000498254 PODXL2Q9NZ53 605 aa6.78□□□□□ -1.32
CALD1-224ENST00000498254 A6NJR5 290 aa6.77□□□□□ -1.33
CALD1-224ENST00000498254 PRSS12P56730 875 aa6.77□□□□□ -1.33
CALD1-224ENST00000498254 RBM46Q8TBY0 533 aaKnown RBP6.77□□□□□ -1.33
CALD1-224ENST00000498254 WBP1LQ9NX94 342 aa6.77□□□□□ -1.33
CALD1-224ENST00000498254 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
CALD1-224ENST00000498254 TTC13Q8NBP0 860 aa6.76□□□□□ -1.33
CALD1-224ENST00000498254 FAM198AQ9UFP1 575 aa6.76□□□□□ -1.33
CALD1-224ENST00000498254 ZNF777Q9ULD5 760 aaPredicted RBP6.76□□□□□ -1.33
CALD1-224ENST00000498254 CSPP1Q1MSJ5 1256 aa6.75□□□□□ -1.33
CALD1-224ENST00000498254 FBXO31Q5XUX0 539 aaPredicted RBP6.75□□□□□ -1.33
CALD1-224ENST00000498254 PROSER2Q86WR7 435 aaPredicted RBP6.75□□□□□ -1.33
CALD1-224ENST00000498254 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.75□□□□□ -1.33
CALD1-224ENST00000498254 RBM27Q9P2N5 1060 aaKnown RBP6.75□□□□□ -1.33
CALD1-224ENST00000498254 LIMD1Q9UGP4 676 aa6.75□□□□□ -1.33
CALD1-224ENST00000498254 RCCD1A6NED2 376 aa6.74□□□□□ -1.33
CALD1-224ENST00000498254 RAD21O60216 631 aa6.74□□□□□ -1.33
CALD1-224ENST00000498254 TRIM26Q12899 539 aaPredicted RBP6.74□□□□□ -1.33
CALD1-224ENST00000498254 SNRKQ9NRH2 765 aa6.74□□□□□ -1.33
CALD1-224ENST00000498254 SEPT9Q9UHD8 586 aaPredicted RBP6.74□□□□□ -1.33
CALD1-224ENST00000498254 DDX11L8A8MPP1 907 aa6.73□□□□□ -1.33
CALD1-224ENST00000498254 C3orf80F5H4A9 247 aa6.73□□□□□ -1.33
CALD1-224ENST00000498254 RFC5P40937 340 aa6.73□□□□□ -1.33
CALD1-224ENST00000498254 FAM98CQ17RN3 349 aaKnown RBP6.73□□□□□ -1.33
CALD1-224ENST00000498254 TSR3Q9UJK0 312 aaKnown RBP6.73□□□□□ -1.33
CALD1-224ENST00000498254 TSKSQ9UJT2 592 aa6.73□□□□□ -1.33
CALD1-224ENST00000498254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.72□□□□□ -1.33
CALD1-224ENST00000498254 FAM181BA6NEQ2 426 aa6.72□□□□□ -1.33
CALD1-224ENST00000498254 TRIM6-TRIM34B2RNG4 842 aa6.72□□□□□ -1.33
CALD1-224ENST00000498254 NUDT18Q6ZVK8 323 aa6.72□□□□□ -1.33
CALD1-224ENST00000498254 SPIRE2Q8WWL2 714 aa6.72□□□□□ -1.33
CALD1-224ENST00000498254 LRCH3Q96II8 777 aa6.72□□□□□ -1.33
CALD1-224ENST00000498254 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
CALD1-224ENST00000498254 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.72□□□□□ -1.33
CALD1-224ENST00000498254 SMAPO00193 183 aa6.71□□□□□ -1.34
CALD1-224ENST00000498254 RIC3Q7Z5B4 369 aa6.71□□□□□ -1.34
CALD1-224ENST00000498254 NUTM1Q86Y26 1132 aa6.71□□□□□ -1.34
CALD1-224ENST00000498254 PNMA3Q9UL41 463 aa6.71□□□□□ -1.34
CALD1-224ENST00000498254 HPS5Q9UPZ3 1129 aa6.71□□□□□ -1.34
CALD1-224ENST00000498254 COG6Q9Y2V7 657 aa6.71□□□□□ -1.34
CALD1-224ENST00000498254 SPDYE5A6NIY4 337 aa6.7□□□□□ -1.34
CALD1-224ENST00000498254 CD46P15529 392 aa6.7□□□□□ -1.34
CALD1-224ENST00000498254 DIXDC1Q155Q3 683 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms