RNA–Protein interactions for RNA: ENST00000497822.5

C1orf61-223, Transcript of chromosome 1 open reading frame 61, human

TSL 2

Gene C1orf61, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-223	ENST00000497822	CHGA	P10645	457 aa	Known RBP	29.53	■■■□□ 2.32
C1orf61-223	ENST00000497822	GCC2	Q8IWJ2	1684 aa		29.53	■■■□□ 2.32
C1orf61-223	ENST00000497822	ZFYVE9	O95405	1425 aa		29.53	■■■□□ 2.32
C1orf61-223	ENST00000497822	TMEM94	Q12767	1356 aa		29.52	■■■□□ 2.32
C1orf61-223	ENST00000497822		E9PCH4	1651 aa		29.52	■■■□□ 2.32
C1orf61-223	ENST00000497822	MED1	Q15648	1581 aa	Predicted RBP	29.52	■■■□□ 2.32
C1orf61-223	ENST00000497822	NUP155	O75694	1391 aa		29.52	■■■□□ 2.32
C1orf61-223	ENST00000497822	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.51	■■■□□ 2.31
C1orf61-223	ENST00000497822	PROSER2	Q86WR7	435 aa	Predicted RBP	29.51	■■■□□ 2.31
C1orf61-223	ENST00000497822	RIMS2	Q9UQ26	1411 aa		29.51	■■■□□ 2.31
C1orf61-223	ENST00000497822	TMEM131L	A2VDJ0	1609 aa		29.5	■■■□□ 2.31
C1orf61-223	ENST00000497822	IQGAP3	Q86VI3	1631 aa		29.48	■■■□□ 2.31
C1orf61-223	ENST00000497822	PPP1R15A	O75807	674 aa	Predicted RBP	29.46	■■■□□ 2.31
C1orf61-223	ENST00000497822	PLEKHG1	Q9ULL1	1385 aa		29.45	■■■□□ 2.31
C1orf61-223	ENST00000497822	HDGF	P51858	240 aa	Known RBP	29.4	■■■□□ 2.3
C1orf61-223	ENST00000497822	NWD1	Q149M9	1564 aa		29.39	■■■□□ 2.3
C1orf61-223	ENST00000497822	FAM135B	Q49AJ0	1406 aa		29.37	■■■□□ 2.29
C1orf61-223	ENST00000497822	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.36	■■■□□ 2.29
C1orf61-223	ENST00000497822	TBX22	Q9Y458	520 aa		29.36	■■■□□ 2.29
C1orf61-223	ENST00000497822	NKTR	P30414	1462 aa	Known RBP	29.36	■■■□□ 2.29
C1orf61-223	ENST00000497822	ADAMTS13	Q76LX8	1427 aa		29.34	■■■□□ 2.29
C1orf61-223	ENST00000497822	RRBP1	Q9P2E9	1410 aa	Known RBP	29.34	■■■□□ 2.29
C1orf61-223	ENST00000497822	PHF23	Q9BUL5	403 aa	Predicted RBP	29.33	■■■□□ 2.29
C1orf61-223	ENST00000497822	CHD2	O14647	1828 aa	Known RBP	29.33	■■■□□ 2.29
C1orf61-223	ENST00000497822	MSH6	P52701	1360 aa		29.28	■■■□□ 2.28
C1orf61-223	ENST00000497822	ROBO1	Q9Y6N7	1651 aa		29.28	■■■□□ 2.28
C1orf61-223	ENST00000497822	SLAIN2	Q9P270	581 aa		29.27	■■■□□ 2.28
C1orf61-223	ENST00000497822	NAIP	Q13075	1403 aa		29.27	■■■□□ 2.28
C1orf61-223	ENST00000497822	SPHKAP	Q2M3C7	1700 aa		29.23	■■■□□ 2.27
C1orf61-223	ENST00000497822	RGS17	Q9UGC6	210 aa	Predicted RBP	29.23	■■■□□ 2.27
C1orf61-223	ENST00000497822	PTPRU	Q92729	1446 aa		29.22	■■■□□ 2.27
C1orf61-223	ENST00000497822	ZNF326	Q5BKZ1	582 aa	Known RBP	29.22	■■■□□ 2.27
C1orf61-223	ENST00000497822	C14orf37	Q86TY3	774 aa		29.21	■■■□□ 2.27
C1orf61-223	ENST00000497822	AMOTL2	Q9Y2J4	779 aa		29.2	■■■□□ 2.26
C1orf61-223	ENST00000497822	DIP2A	Q14689	1571 aa		29.18	■■■□□ 2.26
C1orf61-223	ENST00000497822	PIK3R4	Q99570	1358 aa		29.17	■■■□□ 2.26
C1orf61-223	ENST00000497822	TRIM52	Q96A61	297 aa		29.17	■■■□□ 2.26
C1orf61-223	ENST00000497822	CLTCL1	P53675	1640 aa		29.16	■■■□□ 2.26
C1orf61-223	ENST00000497822	NRXN3	Q9Y4C0	1643 aa		29.16	■■■□□ 2.26
C1orf61-223	ENST00000497822	TRPM2	O94759	1503 aa		29.15	■■■□□ 2.26
C1orf61-223	ENST00000497822	NCOA3	Q9Y6Q9	1424 aa		29.13	■■■□□ 2.25
C1orf61-223	ENST00000497822	C19orf44	Q9H6X5	657 aa		29.13	■■■□□ 2.25
C1orf61-223	ENST00000497822	MET	P08581	1390 aa		29.12	■■■□□ 2.25
C1orf61-223	ENST00000497822	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.11	■■■□□ 2.25
C1orf61-223	ENST00000497822	HFM1	A2PYH4	1435 aa		29.11	■■■□□ 2.25
C1orf61-223	ENST00000497822	SETBP1	Q9Y6X0	1596 aa		29.09	■■■□□ 2.25
C1orf61-223	ENST00000497822	PHLPP1	O60346	1717 aa		29.09	■■■□□ 2.25
C1orf61-223	ENST00000497822	ATF3	P18847	181 aa		29.09	■■■□□ 2.25
C1orf61-223	ENST00000497822	NEXMIF	Q5QGS0	1516 aa		29.07	■■■□□ 2.24
C1orf61-223	ENST00000497822	CADPS2	Q86UW7	1296 aa		29.07	■■■□□ 2.24
C1orf61-223	ENST00000497822	POTEA	Q6S8J7	498 aa		29.05	■■■□□ 2.24
C1orf61-223	ENST00000497822	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.05	■■■□□ 2.24
C1orf61-223	ENST00000497822	XRN1	Q8IZH2	1706 aa	Known RBP	29.04	■■■□□ 2.24
C1orf61-223	ENST00000497822	FOXD1	Q16676	465 aa		29.04	■■■□□ 2.24
C1orf61-223	ENST00000497822	COL16A1	Q07092	1604 aa	Predicted RBP	29.02	■■■□□ 2.24
C1orf61-223	ENST00000497822	JCAD	Q9P266	1359 aa		29.01	■■■□□ 2.24
C1orf61-223	ENST00000497822	KIF1B	O60333	1816 aa		29	■■■□□ 2.23
C1orf61-223	ENST00000497822	BRINP3	Q76B58	766 aa		29	■■■□□ 2.23
C1orf61-223	ENST00000497822	VGF	O15240	615 aa	Predicted RBP	28.93	■■■□□ 2.22
C1orf61-223	ENST00000497822	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.93	■■■□□ 2.22
C1orf61-223	ENST00000497822	MST1R	Q04912	1400 aa		28.92	■■■□□ 2.22
C1orf61-223	ENST00000497822	LRP6	O75581	1613 aa		28.91	■■■□□ 2.22
C1orf61-223	ENST00000497822	DCC	P43146	1447 aa		28.91	■■■□□ 2.22
C1orf61-223	ENST00000497822	DDX17	Q92841	729 aa	Known RBP	28.89	■■■□□ 2.22
C1orf61-223	ENST00000497822	ADGRL3	Q9HAR2	1447 aa		28.88	■■■□□ 2.21
C1orf61-223	ENST00000497822	RPGRIP1L	Q68CZ1	1315 aa		28.88	■■■□□ 2.21
C1orf61-223	ENST00000497822	ROBO2	Q9HCK4	1378 aa		28.88	■■■□□ 2.21
C1orf61-223	ENST00000497822	ASXL1	Q8IXJ9	1541 aa		28.87	■■■□□ 2.21
C1orf61-223	ENST00000497822	SETD1A	O15047	1707 aa	Known RBP	28.86	■■■□□ 2.21
C1orf61-223	ENST00000497822	MPHOSPH9	Q99550	1183 aa		28.86	■■■□□ 2.21
C1orf61-223	ENST00000497822	SPATA31A6	Q5VVP1	1343 aa		28.85	■■■□□ 2.21
C1orf61-223	ENST00000497822	NALCN	Q8IZF0	1738 aa		28.85	■■■□□ 2.21
C1orf61-223	ENST00000497822	RGL3	Q3MIN7	710 aa		28.84	■■■□□ 2.21
C1orf61-223	ENST00000497822	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.83	■■■□□ 2.21
C1orf61-223	ENST00000497822	NUTM2E	B1AL46	878 aa	Predicted RBP	28.83	■■■□□ 2.21
C1orf61-223	ENST00000497822	MEX3C	Q5U5Q3	659 aa	Known RBP	28.83	■■■□□ 2.21
C1orf61-223	ENST00000497822	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.83	■■■□□ 2.21
C1orf61-223	ENST00000497822	PPL	O60437	1756 aa		28.83	■■■□□ 2.21
C1orf61-223	ENST00000497822	ADGRF5	Q8IZF2	1346 aa		28.82	■■■□□ 2.2
C1orf61-223	ENST00000497822	SHPRH	Q149N8	1683 aa		28.8	■■■□□ 2.2
C1orf61-223	ENST00000497822	PTCH1	Q13635	1447 aa		28.78	■■■□□ 2.2
C1orf61-223	ENST00000497822	CCDC144A	A2RUR9	1427 aa		28.77	■■■□□ 2.2
C1orf61-223	ENST00000497822	C1orf167	Q5SNV9	1468 aa		28.77	■■■□□ 2.2
C1orf61-223	ENST00000497822	SPATA31E1	Q6ZUB1	1445 aa		28.77	■■■□□ 2.2
C1orf61-223	ENST00000497822	NHSL1	Q5SYE7	1610 aa		28.76	■■■□□ 2.2
C1orf61-223	ENST00000497822	ORAI2	Q96SN7	254 aa		28.76	■■■□□ 2.19
C1orf61-223	ENST00000497822	SETD5	Q9C0A6	1442 aa		28.76	■■■□□ 2.19
C1orf61-223	ENST00000497822	LRRC59	Q96AG4	307 aa	Known RBP	28.73	■■■□□ 2.19
C1orf61-223	ENST00000497822	STK26	Q9P289	416 aa		28.72	■■■□□ 2.19
C1orf61-223	ENST00000497822	PRAG1	Q86YV5	1406 aa		28.7	■■■□□ 2.19
C1orf61-223	ENST00000497822	TMEM132E	Q6IEE7	984 aa		28.7	■■■□□ 2.18
C1orf61-223	ENST00000497822	ZNF772	Q68DY9	489 aa	Predicted RBP	28.69	■■■□□ 2.18
C1orf61-223	ENST00000497822	PNPLA6	Q8IY17	1366 aa		28.68	■■■□□ 2.18
C1orf61-223	ENST00000497822	WAPL	Q7Z5K2	1190 aa		28.68	■■■□□ 2.18
C1orf61-223	ENST00000497822	ANKRD30B	Q9BXX2	1392 aa		28.65	■■■□□ 2.18
C1orf61-223	ENST00000497822	AFF2	P51816	1311 aa		28.65	■■■□□ 2.18
C1orf61-223	ENST00000497822	IFT172	Q9UG01	1749 aa		28.64	■■■□□ 2.18
C1orf61-223	ENST00000497822	PLEKHH1	Q9ULM0	1364 aa		28.62	■■■□□ 2.17
C1orf61-223	ENST00000497822	C8orf37	Q96NL8	207 aa		28.62	■■■□□ 2.17
C1orf61-223	ENST00000497822	SOS2	Q07890	1332 aa	Predicted RBP	28.62	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms