RNA–Protein interactions for RNA: ENST00000497802.1

PLXNA3-209, Transcript of plexin A3, humanhuman

TSL 2

Gene PLXNA3, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-209ENST00000497802 KDM5AP29375 1690 aaKnown RBP22.25■■□□□ 1.15
PLXNA3-209ENST00000497802 TOM1O60784 492 aa22.24■■□□□ 1.15
PLXNA3-209ENST00000497802 BCANQ96GW7 911 aa22.23■■□□□ 1.15
PLXNA3-209ENST00000497802 TMEM131LA2VDJ0 1609 aa22.23■■□□□ 1.15
PLXNA3-209ENST00000497802 ZFYVE9O95405 1425 aa22.22■■□□□ 1.15
PLXNA3-209ENST00000497802 RIMS2Q9UQ26 1411 aa22.22■■□□□ 1.15
PLXNA3-209ENST00000497802 ILDR2Q71H61 639 aa22.2■■□□□ 1.14
PLXNA3-209ENST00000497802 NAIPQ13075 1403 aa22.19■■□□□ 1.14
PLXNA3-209ENST00000497802 XIRP1Q702N8 1843 aaKnown RBP22.19■■□□□ 1.14
PLXNA3-209ENST00000497802 PPP1R15AO75807 674 aaPredicted RBP22.16■■□□□ 1.14
PLXNA3-209ENST00000497802 TMEM94Q12767 1356 aa22.15■■□□□ 1.14
PLXNA3-209ENST00000497802 KCNA6P17658 529 aa22.15■■□□□ 1.14
PLXNA3-209ENST00000497802 PLEKHG1Q9ULL1 1385 aa22.13■■□□□ 1.13
PLXNA3-209ENST00000497802 PROSER2Q86WR7 435 aaPredicted RBP22.12■■□□□ 1.13
PLXNA3-209ENST00000497802 TRIM52Q96A61 297 aa22.09■■□□□ 1.13
PLXNA3-209ENST00000497802 SPHKAPQ2M3C7 1700 aa22.09■■□□□ 1.13
PLXNA3-209ENST00000497802 ADAMTS13Q76LX8 1427 aa22.08■■□□□ 1.13
PLXNA3-209ENST00000497802 NWD1Q149M9 1564 aa22.08■■□□□ 1.12
PLXNA3-209ENST00000497802 HFM1A2PYH4 1435 aa22.07■■□□□ 1.12
PLXNA3-209ENST00000497802 HDGFP51858 240 aaKnown RBP22.05■■□□□ 1.12
PLXNA3-209ENST00000497802 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.05■■□□□ 1.12
PLXNA3-209ENST00000497802 CLTCL1P53675 1640 aa22.05■■□□□ 1.12
PLXNA3-209ENST00000497802 ZNF326Q5BKZ1 582 aaKnown RBP22.04■■□□□ 1.12
PLXNA3-209ENST00000497802 FOXD1Q16676 465 aa22.03■■□□□ 1.12
PLXNA3-209ENST00000497802 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
PLXNA3-209ENST00000497802 CHD2O14647 1828 aaKnown RBP22.02■■□□□ 1.12
PLXNA3-209ENST00000497802 NKTRP30414 1462 aaKnown RBP22.02■■□□□ 1.12
PLXNA3-209ENST00000497802 MED1Q15648 1581 aaPredicted RBP22.01■■□□□ 1.11
PLXNA3-209ENST00000497802 PTPRUQ92729 1446 aa22■■□□□ 1.11
PLXNA3-209ENST00000497802 TRPM2O94759 1503 aa22■■□□□ 1.11
PLXNA3-209ENST00000497802 SLC4A1APQ9BWU0 796 aaKnown RBP21.99■■□□□ 1.11
PLXNA3-209ENST00000497802 NRXN3Q9Y4C0 1643 aa21.98■■□□□ 1.11
PLXNA3-209ENST00000497802 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
PLXNA3-209ENST00000497802 MSH6P52701 1360 aa21.95■■□□□ 1.1
PLXNA3-209ENST00000497802 NEXMIFQ5QGS0 1516 aa21.95■■□□□ 1.1
PLXNA3-209ENST00000497802 FAM135BQ49AJ0 1406 aa21.94■■□□□ 1.1
PLXNA3-209ENST00000497802 ROBO1Q9Y6N7 1651 aa21.94■■□□□ 1.1
PLXNA3-209ENST00000497802 METP08581 1390 aa21.93■■□□□ 1.1
PLXNA3-209ENST00000497802 DIP2AQ14689 1571 aa21.93■■□□□ 1.1
PLXNA3-209ENST00000497802 C14orf37Q86TY3 774 aa21.93■■□□□ 1.1
PLXNA3-209ENST00000497802 SLAIN2Q9P270 581 aa21.91■■□□□ 1.1
PLXNA3-209ENST00000497802 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
PLXNA3-209ENST00000497802 PIK3R4Q99570 1358 aa21.88■■□□□ 1.09
PLXNA3-209ENST00000497802 KIF1BO60333 1816 aa21.88■■□□□ 1.09
PLXNA3-209ENST00000497802 SOCS7O14512 581 aa21.87■■□□□ 1.09
PLXNA3-209ENST00000497802 MPHOSPH9Q99550 1183 aa21.86■■□□□ 1.09
PLXNA3-209ENST00000497802 XRN1Q8IZH2 1706 aaKnown RBP21.86■■□□□ 1.09
PLXNA3-209ENST00000497802 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.86■■□□□ 1.09
PLXNA3-209ENST00000497802 PHF23Q9BUL5 403 aaPredicted RBP21.84■■□□□ 1.09
PLXNA3-209ENST00000497802 C19orf44Q9H6X5 657 aa21.82■■□□□ 1.08
PLXNA3-209ENST00000497802 NCOA3Q9Y6Q9 1424 aa21.81■■□□□ 1.08
PLXNA3-209ENST00000497802 ATF3P18847 181 aa21.8■■□□□ 1.08
PLXNA3-209ENST00000497802 RGL3Q3MIN7 710 aa21.8■■□□□ 1.08
PLXNA3-209ENST00000497802 RGS17Q9UGC6 210 aaPredicted RBP21.8■■□□□ 1.08
PLXNA3-209ENST00000497802 PHLPP1O60346 1717 aa21.79■■□□□ 1.08
PLXNA3-209ENST00000497802 SETD5Q9C0A6 1442 aa21.79■■□□□ 1.08
PLXNA3-209ENST00000497802 CADPS2Q86UW7 1296 aa21.78■■□□□ 1.08
PLXNA3-209ENST00000497802 ADGRF5Q8IZF2 1346 aa21.78■■□□□ 1.08
PLXNA3-209ENST00000497802 SETD1AO15047 1707 aaKnown RBP21.77■■□□□ 1.08
PLXNA3-209ENST00000497802 VGFO15240 615 aaPredicted RBP21.77■■□□□ 1.08
PLXNA3-209ENST00000497802 CCDC144AA2RUR9 1427 aa21.77■■□□□ 1.08
PLXNA3-209ENST00000497802 PPLO60437 1756 aa21.76■■□□□ 1.07
PLXNA3-209ENST00000497802 RAB3GAP2Q9H2M9 1393 aa21.75■■□□□ 1.07
PLXNA3-209ENST00000497802 ROBO2Q9HCK4 1378 aa21.75■■□□□ 1.07
PLXNA3-209ENST00000497802 SPATA31E1Q6ZUB1 1445 aa21.75■■□□□ 1.07
PLXNA3-209ENST00000497802 BRINP3Q76B58 766 aa21.75■■□□□ 1.07
PLXNA3-209ENST00000497802 RPGRIP1LQ68CZ1 1315 aa21.75■■□□□ 1.07
PLXNA3-209ENST00000497802 COL16A1Q07092 1604 aaPredicted RBP21.74■■□□□ 1.07
PLXNA3-209ENST00000497802 MST1RQ04912 1400 aa21.72■■□□□ 1.07
PLXNA3-209ENST00000497802 NALCNQ8IZF0 1738 aa21.72■■□□□ 1.07
PLXNA3-209ENST00000497802 DDX17Q92841 729 aaKnown RBP21.72■■□□□ 1.07
PLXNA3-209ENST00000497802 ADGRL3Q9HAR2 1447 aa21.71■■□□□ 1.07
PLXNA3-209ENST00000497802 JCADQ9P266 1359 aa21.69■■□□□ 1.06
PLXNA3-209ENST00000497802 STK26Q9P289 416 aa21.68■■□□□ 1.06
PLXNA3-209ENST00000497802 DCCP43146 1447 aa21.68■■□□□ 1.06
PLXNA3-209ENST00000497802 ASXL1Q8IXJ9 1541 aa21.68■■□□□ 1.06
PLXNA3-209ENST00000497802 AHDC1Q5TGY3 1603 aaPredicted RBP21.68■■□□□ 1.06
PLXNA3-209ENST00000497802 TMEM132EQ6IEE7 984 aa21.67■■□□□ 1.06
PLXNA3-209ENST00000497802 POTEAQ6S8J7 498 aa21.67■■□□□ 1.06
PLXNA3-209ENST00000497802 IFT172Q9UG01 1749 aa21.66■■□□□ 1.06
PLXNA3-209ENST00000497802 LRP6O75581 1613 aa21.66■■□□□ 1.06
PLXNA3-209ENST00000497802 PTCH1Q13635 1447 aa21.66■■□□□ 1.06
PLXNA3-209ENST00000497802 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
PLXNA3-209ENST00000497802 ORAI2Q96SN7 254 aa21.62■■□□□ 1.05
PLXNA3-209ENST00000497802 C1orf167Q5SNV9 1468 aa21.61■■□□□ 1.05
PLXNA3-209ENST00000497802 ANKRD30BQ9BXX2 1392 aa21.61■■□□□ 1.05
PLXNA3-209ENST00000497802 PLEKHH1Q9ULM0 1364 aa21.61■■□□□ 1.05
PLXNA3-209ENST00000497802 NUTM2BA6NNL0 878 aaPredicted RBP21.6■■□□□ 1.05
PLXNA3-209ENST00000497802 NUTM2EB1AL46 878 aaPredicted RBP21.6■■□□□ 1.05
PLXNA3-209ENST00000497802 NUTM2AQ8IVF1 878 aaPredicted RBP21.6■■□□□ 1.05
PLXNA3-209ENST00000497802 PIK3C2GO75747 1445 aa21.6■■□□□ 1.05
PLXNA3-209ENST00000497802 PRAG1Q86YV5 1406 aa21.59■■□□□ 1.05
PLXNA3-209ENST00000497802 NHSL1Q5SYE7 1610 aa21.58■■□□□ 1.05
PLXNA3-209ENST00000497802 NUTM2FA1L443 756 aa21.57■■□□□ 1.04
PLXNA3-209ENST00000497802 CFAP70Q5T0N1 1121 aa21.57■■□□□ 1.04
PLXNA3-209ENST00000497802 SHPRHQ149N8 1683 aa21.56■■□□□ 1.04
PLXNA3-209ENST00000497802 LRPPRCP42704 1394 aaKnown RBP21.56■■□□□ 1.04
PLXNA3-209ENST00000497802 SPATA31A6Q5VVP1 1343 aa21.55■■□□□ 1.04
PLXNA3-209ENST00000497802 MEX3CQ5U5Q3 659 aaKnown RBP21.55■■□□□ 1.04
PLXNA3-209ENST00000497802 C14orf93Q9H972 538 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms