RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-210ENST00000497730 SSTR3P32745 418 aaPredicted RBP12.31□□□□□ -0.44
TRA2A-210ENST00000497730 TMEM132AQ24JP5 1023 aa12.31□□□□□ -0.44
TRA2A-210ENST00000497730 TMEM134Q9H6X4 195 aa12.31□□□□□ -0.44
TRA2A-210ENST00000497730 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
TRA2A-210ENST00000497730 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
TRA2A-210ENST00000497730 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
TRA2A-210ENST00000497730 BHMG1C9JSJ3 638 aaPredicted RBP12.29□□□□□ -0.44
TRA2A-210ENST00000497730 MRPL50Q8N5N7 158 aaKnown RBP12.29□□□□□ -0.44
TRA2A-210ENST00000497730 STAC3Q96MF2 364 aa12.29□□□□□ -0.44
TRA2A-210ENST00000497730 LAPTM4BQ86VI4 370 aa12.28□□□□□ -0.44
TRA2A-210ENST00000497730 DDRGK1Q96HY6 314 aa12.27□□□□□ -0.45
TRA2A-210ENST00000497730 HDGFP51858 240 aaKnown RBP12.26□□□□□ -0.45
TRA2A-210ENST00000497730 SWT1Q5T5J6 900 aaKnown RBP12.26□□□□□ -0.45
TRA2A-210ENST00000497730 DDX11L8A8MPP1 907 aa12.25□□□□□ -0.45
TRA2A-210ENST00000497730 HRO43593 1189 aa12.25□□□□□ -0.45
TRA2A-210ENST00000497730 SAMD7Q7Z3H4 446 aa12.24□□□□□ -0.45
TRA2A-210ENST00000497730 SULF1Q8IWU6 871 aa12.24□□□□□ -0.45
TRA2A-210ENST00000497730 BEGAINQ9BUH8 593 aa12.24□□□□□ -0.45
TRA2A-210ENST00000497730 PLEKHG3A1L390 1219 aa12.23□□□□□ -0.45
TRA2A-210ENST00000497730 ZFRQ96KR1 1074 aaKnown RBP12.23□□□□□ -0.45
TRA2A-210ENST00000497730 GOLGA8CPA6NN73 597 aa12.22□□□□□ -0.45
TRA2A-210ENST00000497730 RDH13Q8NBN7 331 aa12.22□□□□□ -0.45
TRA2A-210ENST00000497730 RNF40O75150 1001 aa12.21□□□□□ -0.45
TRA2A-210ENST00000497730 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
TRA2A-210ENST00000497730 CD46P15529 392 aa12.18□□□□□ -0.46
TRA2A-210ENST00000497730 RSPH4AQ5TD94 716 aa12.18□□□□□ -0.46
TRA2A-210ENST00000497730 SLF2Q8IX21 1173 aa12.17□□□□□ -0.46
TRA2A-210ENST00000497730 LRCH3Q96II8 777 aa12.17□□□□□ -0.46
TRA2A-210ENST00000497730 ANKK1Q8NFD2 765 aa12.16□□□□□ -0.46
TRA2A-210ENST00000497730 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.16□□□□□ -0.46
TRA2A-210ENST00000497730 WNT2BQ93097 391 aa12.15□□□□□ -0.46
TRA2A-210ENST00000497730 SLC10A3P09131 477 aa12.14□□□□□ -0.47
TRA2A-210ENST00000497730 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
TRA2A-210ENST00000497730 RSPH6AQ9H0K4 717 aa12.12□□□□□ -0.47
TRA2A-210ENST00000497730 BCAMP50895 628 aa12.11□□□□□ -0.47
TRA2A-210ENST00000497730 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
TRA2A-210ENST00000497730 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
TRA2A-210ENST00000497730 CFHP08603 1231 aa12.1□□□□□ -0.47
TRA2A-210ENST00000497730 ATP1B4Q9UN42 357 aaPredicted RBP12.1□□□□□ -0.47
TRA2A-210ENST00000497730 SOWAHBA6NEL2 793 aa12.09□□□□□ -0.47
TRA2A-210ENST00000497730 GCGRP47871 477 aa12.09□□□□□ -0.47
TRA2A-210ENST00000497730 DIXDC1Q155Q3 683 aa12.09□□□□□ -0.47
TRA2A-210ENST00000497730 SPIRE2Q8WWL2 714 aa12.09□□□□□ -0.47
TRA2A-210ENST00000497730 HPS5Q9UPZ3 1129 aa12.09□□□□□ -0.47
TRA2A-210ENST00000497730 SH3D19Q5HYK7 790 aa12.08□□□□□ -0.48
TRA2A-210ENST00000497730 MYSM1Q5VVJ2 828 aa12.08□□□□□ -0.48
TRA2A-210ENST00000497730 POLR3EQ9NVU0 708 aa12.08□□□□□ -0.48
TRA2A-210ENST00000497730 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
TRA2A-210ENST00000497730 KDM4AO75164 1064 aa12.07□□□□□ -0.48
TRA2A-210ENST00000497730 KCTD12Q96CX2 325 aaKnown RBP12.07□□□□□ -0.48
TRA2A-210ENST00000497730 PPP4CP60510 307 aa12.06□□□□□ -0.48
TRA2A-210ENST00000497730 PCMTD1Q96MG8 357 aaPredicted RBP12.06□□□□□ -0.48
TRA2A-210ENST00000497730 GOPCQ9HD26 462 aa12.06□□□□□ -0.48
TRA2A-210ENST00000497730 SKIV2LQ15477 1246 aaKnown RBP12.05□□□□□ -0.48
TRA2A-210ENST00000497730 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
TRA2A-210ENST00000497730 TSR3Q9UJK0 312 aaKnown RBP12.04□□□□□ -0.48
TRA2A-210ENST00000497730 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
TRA2A-210ENST00000497730 KMT5BQ4FZB7 885 aa12.03□□□□□ -0.48
TRA2A-210ENST00000497730 MOXD2PA6NHM9 499 aa12.02□□□□□ -0.49
TRA2A-210ENST00000497730 CLK2P49760 499 aaKnown RBP12.02□□□□□ -0.49
TRA2A-210ENST00000497730 USP46P62068 366 aa12.02□□□□□ -0.49
TRA2A-210ENST00000497730 THSD4Q6ZMP0 1018 aa12.02□□□□□ -0.49
TRA2A-210ENST00000497730 RIC3Q7Z5B4 369 aa12.02□□□□□ -0.49
TRA2A-210ENST00000497730 NDUFV2P19404 249 aa12.01□□□□□ -0.49
TRA2A-210ENST00000497730 FUT2Q10981 343 aa12.01□□□□□ -0.49
TRA2A-210ENST00000497730 PROCA1Q8NCQ7 364 aaPredicted RBP12.01□□□□□ -0.49
TRA2A-210ENST00000497730 WBP1LQ9NX94 342 aa12.01□□□□□ -0.49
TRA2A-210ENST00000497730 LIMD1Q9UGP4 676 aa12.01□□□□□ -0.49
TRA2A-210ENST00000497730 HOXA2O43364 376 aa12□□□□□ -0.49
TRA2A-210ENST00000497730 RSBN1LQ6PCB5 846 aaPredicted RBP11.99□□□□□ -0.49
TRA2A-210ENST00000497730 PRR14Q9BWN1 585 aa11.99□□□□□ -0.49
TRA2A-210ENST00000497730 APLP1P51693 650 aa11.98□□□□□ -0.49
TRA2A-210ENST00000497730 GRIPAP1Q4V328 841 aa11.98□□□□□ -0.49
TRA2A-210ENST00000497730 HLA-CQ95604 372 aa11.98□□□□□ -0.49
TRA2A-210ENST00000497730 SPTLC1O15269 473 aa11.97□□□□□ -0.49
TRA2A-210ENST00000497730 ATP6V1AP38606 617 aa11.97□□□□□ -0.49
TRA2A-210ENST00000497730 CSPP1Q1MSJ5 1256 aa11.97□□□□□ -0.49
TRA2A-210ENST00000497730 ACTN4O43707 911 aaKnown RBP11.96□□□□□ -0.49
TRA2A-210ENST00000497730 PTPN5P54829 565 aa11.96□□□□□ -0.49
TRA2A-210ENST00000497730 GUCA2AQ02747 115 aa11.96□□□□□ -0.49
TRA2A-210ENST00000497730 FDX1P10109 184 aa11.95□□□□□ -0.5
TRA2A-210ENST00000497730 PUS10Q3MIT2 529 aaKnown RBP11.95□□□□□ -0.5
TRA2A-210ENST00000497730 PCDHB15Q9Y5E8 787 aa11.94□□□□□ -0.5
TRA2A-210ENST00000497730 GJA5P36382 358 aa11.93□□□□□ -0.5
TRA2A-210ENST00000497730 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRA2A-210ENST00000497730 PCDHB3Q9Y5E6 796 aa11.92□□□□□ -0.5
TRA2A-210ENST00000497730 MORN1Q5T089 497 aa11.91□□□□□ -0.5
TRA2A-210ENST00000497730 PCDHGC3Q9UN70 934 aa11.91□□□□□ -0.5
TRA2A-210ENST00000497730 NUTM2BA6NNL0 878 aaPredicted RBP11.9□□□□□ -0.5
TRA2A-210ENST00000497730 NUTM2EB1AL46 878 aaPredicted RBP11.9□□□□□ -0.5
TRA2A-210ENST00000497730 QPCTQ16769 361 aa11.9□□□□□ -0.5
TRA2A-210ENST00000497730 TUSC1Q2TAM9 212 aa11.9□□□□□ -0.5
TRA2A-210ENST00000497730 NUTM2DQ5VT03 806 aaPredicted RBP11.9□□□□□ -0.5
TRA2A-210ENST00000497730 NUTM2AQ8IVF1 878 aaPredicted RBP11.9□□□□□ -0.5
TRA2A-210ENST00000497730 CABLES1Q8TDN4 633 aa11.89□□□□□ -0.51
TRA2A-210ENST00000497730 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
TRA2A-210ENST00000497730 ZBTB3Q9H5J0 574 aa11.88□□□□□ -0.51
TRA2A-210ENST00000497730 C6orf229H3BNL8 230 aa11.87□□□□□ -0.51
TRA2A-210ENST00000497730 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
TRA2A-210ENST00000497730 BLOC1S3Q6QNY0 202 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 1293.2 ms