RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 UNC13BO14795 1591 aa27.65■■■□□ 2.02
ELL3-208ENST00000497700 RPRD2Q5VT52 1461 aaKnown RBP27.65■■■□□ 2.02
ELL3-208ENST00000497700 PROSER2Q86WR7 435 aaPredicted RBP27.65■■■□□ 2.02
ELL3-208ENST00000497700 SLC52A1Q9NWF4 448 aa27.65■■■□□ 2.02
ELL3-208ENST00000497700 TMEM131LA2VDJ0 1609 aa27.63■■■□□ 2.01
ELL3-208ENST00000497700 ZFYVE9O95405 1425 aa27.63■■■□□ 2.01
ELL3-208ENST00000497700 E9PCH4 1651 aa27.62■■■□□ 2.01
ELL3-208ENST00000497700 FAM135BQ49AJ0 1406 aa27.61■■■□□ 2.01
ELL3-208ENST00000497700 NKTRP30414 1462 aaKnown RBP27.61■■■□□ 2.01
ELL3-208ENST00000497700 RIMS2Q9UQ26 1411 aa27.6■■■□□ 2.01
ELL3-208ENST00000497700 RGS17Q9UGC6 210 aaPredicted RBP27.59■■■□□ 2.01
ELL3-208ENST00000497700 CHD2O14647 1828 aaKnown RBP27.59■■■□□ 2.01
ELL3-208ENST00000497700 CHGAP10645 457 aaKnown RBP27.56■■■□□ 2
ELL3-208ENST00000497700 NUTM2DQ5VT03 806 aaPredicted RBP27.56■■■□□ 2
ELL3-208ENST00000497700 PLEKHG1Q9ULL1 1385 aa27.56■■■□□ 2
ELL3-208ENST00000497700 PPP1R15AO75807 674 aaPredicted RBP27.55■■■□□ 2
ELL3-208ENST00000497700 IQGAP3Q86VI3 1631 aa27.54■■■□□ 2
ELL3-208ENST00000497700 PPARGC1BQ86YN6 1023 aaKnown RBP27.52■■■□□ 2
ELL3-208ENST00000497700 MSH6P52701 1360 aa27.51■■□□□ 1.99
ELL3-208ENST00000497700 ITGAEP38570 1179 aa27.51■■□□□ 1.99
ELL3-208ENST00000497700 PHLPP1O60346 1717 aa27.49■■□□□ 1.99
ELL3-208ENST00000497700 ROCK1Q13464 1354 aa27.48■■□□□ 1.99
ELL3-208ENST00000497700 ADAMTS13Q76LX8 1427 aa27.47■■□□□ 1.99
ELL3-208ENST00000497700 SLAIN2Q9P270 581 aa27.44■■□□□ 1.98
ELL3-208ENST00000497700 NUP155O75694 1391 aa27.44■■□□□ 1.98
ELL3-208ENST00000497700 TBX22Q9Y458 520 aa27.43■■□□□ 1.98
ELL3-208ENST00000497700 HDGFP51858 240 aaKnown RBP27.42■■□□□ 1.98
ELL3-208ENST00000497700 POTEAQ6S8J7 498 aa27.42■■□□□ 1.98
ELL3-208ENST00000497700 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.4■■□□□ 1.98
ELL3-208ENST00000497700 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.4■■□□□ 1.98
ELL3-208ENST00000497700 DIP2AQ14689 1571 aa27.39■■□□□ 1.98
ELL3-208ENST00000497700 COL16A1Q07092 1604 aaPredicted RBP27.39■■□□□ 1.98
ELL3-208ENST00000497700 C14orf37Q86TY3 774 aa27.39■■□□□ 1.98
ELL3-208ENST00000497700 SPHKAPQ2M3C7 1700 aa27.38■■□□□ 1.97
ELL3-208ENST00000497700 PTPRUQ92729 1446 aa27.36■■□□□ 1.97
ELL3-208ENST00000497700 NRXN3Q9Y4C0 1643 aa27.35■■□□□ 1.97
ELL3-208ENST00000497700 TRPM2O94759 1503 aa27.34■■□□□ 1.97
ELL3-208ENST00000497700 SETD1AO15047 1707 aaKnown RBP27.33■■□□□ 1.97
ELL3-208ENST00000497700 JCADQ9P266 1359 aa27.33■■□□□ 1.97
ELL3-208ENST00000497700 NCOA3Q9Y6Q9 1424 aa27.31■■□□□ 1.96
ELL3-208ENST00000497700 AMOTL2Q9Y2J4 779 aa27.3■■□□□ 1.96
ELL3-208ENST00000497700 PIK3R4Q99570 1358 aa27.3■■□□□ 1.96
ELL3-208ENST00000497700 LRP6O75581 1613 aa27.29■■□□□ 1.96
ELL3-208ENST00000497700 XRN1Q8IZH2 1706 aaKnown RBP27.28■■□□□ 1.96
ELL3-208ENST00000497700 C19orf44Q9H6X5 657 aa27.27■■□□□ 1.96
ELL3-208ENST00000497700 ATF3P18847 181 aa27.26■■□□□ 1.95
ELL3-208ENST00000497700 CLTCL1P53675 1640 aa27.26■■□□□ 1.95
ELL3-208ENST00000497700 AHDC1Q5TGY3 1603 aaPredicted RBP27.26■■□□□ 1.95
ELL3-208ENST00000497700 SETBP1Q9Y6X0 1596 aa27.26■■□□□ 1.95
ELL3-208ENST00000497700 CADPS2Q86UW7 1296 aa27.25■■□□□ 1.95
ELL3-208ENST00000497700 ZNF326Q5BKZ1 582 aaKnown RBP27.24■■□□□ 1.95
ELL3-208ENST00000497700 SHPRHQ149N8 1683 aa27.21■■□□□ 1.95
ELL3-208ENST00000497700 METP08581 1390 aa27.21■■□□□ 1.95
ELL3-208ENST00000497700 NEXMIFQ5QGS0 1516 aa27.2■■□□□ 1.94
ELL3-208ENST00000497700 BRINP3Q76B58 766 aa27.19■■□□□ 1.94
ELL3-208ENST00000497700 KIF1BO60333 1816 aa27.16■■□□□ 1.94
ELL3-208ENST00000497700 ASXL1Q8IXJ9 1541 aa27.16■■□□□ 1.94
ELL3-208ENST00000497700 NAIPQ13075 1403 aa27.16■■□□□ 1.94
ELL3-208ENST00000497700 SPATA31A6Q5VVP1 1343 aa27.16■■□□□ 1.94
ELL3-208ENST00000497700 MEX3CQ5U5Q3 659 aaKnown RBP27.15■■□□□ 1.94
ELL3-208ENST00000497700 NALCNQ8IZF0 1738 aa27.15■■□□□ 1.94
ELL3-208ENST00000497700 RRBP1Q9P2E9 1410 aaKnown RBP27.15■■□□□ 1.94
ELL3-208ENST00000497700 DCCP43146 1447 aa27.14■■□□□ 1.93
ELL3-208ENST00000497700 MST1RQ04912 1400 aa27.14■■□□□ 1.93
ELL3-208ENST00000497700 NHSL1Q5SYE7 1610 aa27.12■■□□□ 1.93
ELL3-208ENST00000497700 NUTM2BA6NNL0 878 aaPredicted RBP27.11■■□□□ 1.93
ELL3-208ENST00000497700 NUTM2EB1AL46 878 aaPredicted RBP27.11■■□□□ 1.93
ELL3-208ENST00000497700 NUTM2AQ8IVF1 878 aaPredicted RBP27.11■■□□□ 1.93
ELL3-208ENST00000497700 DDX17Q92841 729 aaKnown RBP27.09■■□□□ 1.93
ELL3-208ENST00000497700 ADGRL3Q9HAR2 1447 aa27.08■■□□□ 1.93
ELL3-208ENST00000497700 TRIM52Q96A61 297 aa27.07■■□□□ 1.92
ELL3-208ENST00000497700 ZNF772Q68DY9 489 aaPredicted RBP27.03■■□□□ 1.92
ELL3-208ENST00000497700 SETD5Q9C0A6 1442 aa27.03■■□□□ 1.92
ELL3-208ENST00000497700 PPLO60437 1756 aa26.99■■□□□ 1.91
ELL3-208ENST00000497700 HFM1A2PYH4 1435 aa26.99■■□□□ 1.91
ELL3-208ENST00000497700 ROBO2Q9HCK4 1378 aa26.98■■□□□ 1.91
ELL3-208ENST00000497700 AFF2P51816 1311 aa26.97■■□□□ 1.91
ELL3-208ENST00000497700 PNPLA6Q8IY17 1366 aa26.97■■□□□ 1.91
ELL3-208ENST00000497700 C1orf167Q5SNV9 1468 aa26.96■■□□□ 1.91
ELL3-208ENST00000497700 FOXD1Q16676 465 aa26.95■■□□□ 1.9
ELL3-208ENST00000497700 SLC4A1APQ9BWU0 796 aaKnown RBP26.95■■□□□ 1.9
ELL3-208ENST00000497700 PTCH1Q13635 1447 aa26.95■■□□□ 1.9
ELL3-208ENST00000497700 LRRC59Q96AG4 307 aaKnown RBP26.94■■□□□ 1.9
ELL3-208ENST00000497700 VGFO15240 615 aaPredicted RBP26.92■■□□□ 1.9
ELL3-208ENST00000497700 RXRBP28702 533 aa26.92■■□□□ 1.9
ELL3-208ENST00000497700 UPF1Q92900 1129 aaKnown RBP eCLIP26.92■■□□□ 1.9
ELL3-208ENST00000497700 C8orf37Q96NL8 207 aa26.92■■□□□ 1.9
ELL3-208ENST00000497700 ORAI2Q96SN7 254 aa26.91■■□□□ 1.9
ELL3-208ENST00000497700 LAMC1P11047 1609 aa26.9■■□□□ 1.9
ELL3-208ENST00000497700 ADAMTS2O95450 1211 aa26.86■■□□□ 1.89
ELL3-208ENST00000497700 RPGRIP1LQ68CZ1 1315 aa26.86■■□□□ 1.89
ELL3-208ENST00000497700 PRAG1Q86YV5 1406 aa26.85■■□□□ 1.89
ELL3-208ENST00000497700 CDK12Q9NYV4 1490 aaPredicted RBP26.84■■□□□ 1.89
ELL3-208ENST00000497700 RGS12O14924 1447 aa26.83■■□□□ 1.89
ELL3-208ENST00000497700 ADGRF5Q8IZF2 1346 aa26.83■■□□□ 1.89
ELL3-208ENST00000497700 SOS2Q07890 1332 aaPredicted RBP26.82■■□□□ 1.88
ELL3-208ENST00000497700 IFT172Q9UG01 1749 aa26.82■■□□□ 1.88
ELL3-208ENST00000497700 QTRT2Q9H974 415 aaKnown RBP26.81■■□□□ 1.88
ELL3-208ENST00000497700 RGL3Q3MIN7 710 aa26.8■■□□□ 1.88
ELL3-208ENST00000497700 CDC42BPGQ6DT37 1551 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms