RNA–Protein interactions for RNA: ENST00000497653.5

PCBP4-217, Transcript of poly(rC) binding protein 4, humanhuman

TSL 4

Gene PCBP4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-217ENST00000497653 PPP1R15AO75807 674 aaPredicted RBP24.7■■□□□ 1.54
PCBP4-217ENST00000497653 FAM50AQ14320 339 aaKnown RBP24.7■■□□□ 1.54
PCBP4-217ENST00000497653 ADGRB3O60242 1522 aa24.68■■□□□ 1.54
PCBP4-217ENST00000497653 HDGFP51858 240 aaKnown RBP24.68■■□□□ 1.54
PCBP4-217ENST00000497653 NKTRP30414 1462 aaKnown RBP24.66■■□□□ 1.54
PCBP4-217ENST00000497653 CHGAP10645 457 aaKnown RBP24.65■■□□□ 1.54
PCBP4-217ENST00000497653 C14orf37Q86TY3 774 aa24.63■■□□□ 1.53
PCBP4-217ENST00000497653 ANKRD50Q9ULJ7 1429 aa24.62■■□□□ 1.53
PCBP4-217ENST00000497653 PLEKHG1Q9ULL1 1385 aa24.62■■□□□ 1.53
PCBP4-217ENST00000497653 NWD1Q149M9 1564 aa24.62■■□□□ 1.53
PCBP4-217ENST00000497653 RIMS2Q9UQ26 1411 aa24.61■■□□□ 1.53
PCBP4-217ENST00000497653 NUTM2DQ5VT03 806 aaPredicted RBP24.61■■□□□ 1.53
PCBP4-217ENST00000497653 JCADQ9P266 1359 aa24.61■■□□□ 1.53
PCBP4-217ENST00000497653 ADGRL2O95490 1459 aa24.61■■□□□ 1.53
PCBP4-217ENST00000497653 ZFYVE9O95405 1425 aa24.61■■□□□ 1.53
PCBP4-217ENST00000497653 RPRD2Q5VT52 1461 aaKnown RBP24.6■■□□□ 1.53
PCBP4-217ENST00000497653 TBX22Q9Y458 520 aa24.6■■□□□ 1.53
PCBP4-217ENST00000497653 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.58■■□□□ 1.53
PCBP4-217ENST00000497653 PHLPP1O60346 1717 aa24.55■■□□□ 1.52
PCBP4-217ENST00000497653 ATF3P18847 181 aa24.53■■□□□ 1.52
PCBP4-217ENST00000497653 MEX3CQ5U5Q3 659 aaKnown RBP24.53■■□□□ 1.52
PCBP4-217ENST00000497653 CADPS2Q86UW7 1296 aa24.52■■□□□ 1.52
PCBP4-217ENST00000497653 C19orf44Q9H6X5 657 aa24.52■■□□□ 1.52
PCBP4-217ENST00000497653 CHD2O14647 1828 aaKnown RBP24.51■■□□□ 1.51
PCBP4-217ENST00000497653 TMEM131LA2VDJ0 1609 aa24.51■■□□□ 1.51
PCBP4-217ENST00000497653 NCOA3Q9Y6Q9 1424 aa24.51■■□□□ 1.51
PCBP4-217ENST00000497653 MYO5BQ9ULV0 1848 aa24.49■■□□□ 1.51
PCBP4-217ENST00000497653 GCC2Q8IWJ2 1684 aa24.49■■□□□ 1.51
PCBP4-217ENST00000497653 SPATA31A6Q5VVP1 1343 aa24.48■■□□□ 1.51
PCBP4-217ENST00000497653 ADAMTS13Q76LX8 1427 aa24.47■■□□□ 1.51
PCBP4-217ENST00000497653 AMOTL2Q9Y2J4 779 aa24.47■■□□□ 1.51
PCBP4-217ENST00000497653 ZNF772Q68DY9 489 aaPredicted RBP24.46■■□□□ 1.51
PCBP4-217ENST00000497653 TRIM52Q96A61 297 aa24.45■■□□□ 1.5
PCBP4-217ENST00000497653 COL16A1Q07092 1604 aaPredicted RBP24.45■■□□□ 1.5
PCBP4-217ENST00000497653 PIK3R4Q99570 1358 aa24.43■■□□□ 1.5
PCBP4-217ENST00000497653 LRP6O75581 1613 aa24.43■■□□□ 1.5
PCBP4-217ENST00000497653 SETD1AO15047 1707 aaKnown RBP24.43■■□□□ 1.5
PCBP4-217ENST00000497653 NUTM2BA6NNL0 878 aaPredicted RBP24.42■■□□□ 1.5
PCBP4-217ENST00000497653 NUTM2EB1AL46 878 aaPredicted RBP24.42■■□□□ 1.5
PCBP4-217ENST00000497653 NUTM2AQ8IVF1 878 aaPredicted RBP24.42■■□□□ 1.5
PCBP4-217ENST00000497653 BRINP3Q76B58 766 aa24.41■■□□□ 1.5
PCBP4-217ENST00000497653 NUP155O75694 1391 aa24.41■■□□□ 1.5
PCBP4-217ENST00000497653 ITGAEP38570 1179 aa24.4■■□□□ 1.5
PCBP4-217ENST00000497653 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.4■■□□□ 1.5
PCBP4-217ENST00000497653 UNC13BO14795 1591 aa24.39■■□□□ 1.5
PCBP4-217ENST00000497653 UPF1Q92900 1129 aaKnown RBP eCLIP24.39■■□□□ 1.49
PCBP4-217ENST00000497653 ROCK1Q13464 1354 aa24.39■■□□□ 1.49
PCBP4-217ENST00000497653 PTPRUQ92729 1446 aa24.38■■□□□ 1.49
PCBP4-217ENST00000497653 E9PCH4 1651 aa24.38■■□□□ 1.49
PCBP4-217ENST00000497653 RXRBP28702 533 aa24.37■■□□□ 1.49
PCBP4-217ENST00000497653 DIP2AQ14689 1571 aa24.37■■□□□ 1.49
PCBP4-217ENST00000497653 AHDC1Q5TGY3 1603 aaPredicted RBP24.35■■□□□ 1.49
PCBP4-217ENST00000497653 ZNF326Q5BKZ1 582 aaKnown RBP24.35■■□□□ 1.49
PCBP4-217ENST00000497653 TRPM2O94759 1503 aa24.35■■□□□ 1.49
PCBP4-217ENST00000497653 IQGAP3Q86VI3 1631 aa24.31■■□□□ 1.48
PCBP4-217ENST00000497653 LRRC59Q96AG4 307 aaKnown RBP24.29■■□□□ 1.48
PCBP4-217ENST00000497653 SHPRHQ149N8 1683 aa24.29■■□□□ 1.48
PCBP4-217ENST00000497653 AFF2P51816 1311 aa24.29■■□□□ 1.48
PCBP4-217ENST00000497653 DDX17Q92841 729 aaKnown RBP24.27■■□□□ 1.48
PCBP4-217ENST00000497653 METP08581 1390 aa24.27■■□□□ 1.48
PCBP4-217ENST00000497653 DCCP43146 1447 aa24.27■■□□□ 1.48
PCBP4-217ENST00000497653 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
PCBP4-217ENST00000497653 ASXL1Q8IXJ9 1541 aa24.25■■□□□ 1.47
PCBP4-217ENST00000497653 C8orf37Q96NL8 207 aa24.25■■□□□ 1.47
PCBP4-217ENST00000497653 MST1RQ04912 1400 aa24.25■■□□□ 1.47
PCBP4-217ENST00000497653 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
PCBP4-217ENST00000497653 QTRT2Q9H974 415 aaKnown RBP24.23■■□□□ 1.47
PCBP4-217ENST00000497653 RRBP1Q9P2E9 1410 aaKnown RBP24.21■■□□□ 1.47
PCBP4-217ENST00000497653 SETBP1Q9Y6X0 1596 aa24.2■■□□□ 1.47
PCBP4-217ENST00000497653 NRXN3Q9Y4C0 1643 aa24.2■■□□□ 1.46
PCBP4-217ENST00000497653 XRN1Q8IZH2 1706 aaKnown RBP24.19■■□□□ 1.46
PCBP4-217ENST00000497653 ADAMTS2O95450 1211 aa24.18■■□□□ 1.46
PCBP4-217ENST00000497653 CDK12Q9NYV4 1490 aaPredicted RBP24.18■■□□□ 1.46
PCBP4-217ENST00000497653 RBM6P78332 1123 aaKnown RBP24.17■■□□□ 1.46
PCBP4-217ENST00000497653 NGLY1Q96IV0 654 aa24.17■■□□□ 1.46
PCBP4-217ENST00000497653 PNPLA6Q8IY17 1366 aa24.16■■□□□ 1.46
PCBP4-217ENST00000497653 ADGRL3Q9HAR2 1447 aa24.16■■□□□ 1.46
PCBP4-217ENST00000497653 NHSL1Q5SYE7 1610 aa24.13■■□□□ 1.45
PCBP4-217ENST00000497653 SPHKAPQ2M3C7 1700 aa24.13■■□□□ 1.45
PCBP4-217ENST00000497653 ORAI2Q96SN7 254 aa24.11■■□□□ 1.45
PCBP4-217ENST00000497653 C1orf167Q5SNV9 1468 aa24.1■■□□□ 1.45
PCBP4-217ENST00000497653 RGS12O14924 1447 aa24.1■■□□□ 1.45
PCBP4-217ENST00000497653 VGFO15240 615 aaPredicted RBP24.09■■□□□ 1.45
PCBP4-217ENST00000497653 NEXMIFQ5QGS0 1516 aa24.09■■□□□ 1.45
PCBP4-217ENST00000497653 USP21Q9UK80 565 aa24.07■■□□□ 1.44
PCBP4-217ENST00000497653 CLTCL1P53675 1640 aa24.06■■□□□ 1.44
PCBP4-217ENST00000497653 ROBO2Q9HCK4 1378 aa24.05■■□□□ 1.44
PCBP4-217ENST00000497653 NALCNQ8IZF0 1738 aa24.05■■□□□ 1.44
PCBP4-217ENST00000497653 SOS2Q07890 1332 aaPredicted RBP24.05■■□□□ 1.44
PCBP4-217ENST00000497653 NAIPQ13075 1403 aa24.03■■□□□ 1.44
PCBP4-217ENST00000497653 TRPC5Q9UL62 973 aaPredicted RBP24.02■■□□□ 1.44
PCBP4-217ENST00000497653 PTCH1Q13635 1447 aa24.01■■□□□ 1.43
PCBP4-217ENST00000497653 HFM1A2PYH4 1435 aa24■■□□□ 1.43
PCBP4-217ENST00000497653 FNBP4Q8N3X1 1017 aaPredicted RBP23.99■■□□□ 1.43
PCBP4-217ENST00000497653 RPGRIP1LQ68CZ1 1315 aa23.99■■□□□ 1.43
PCBP4-217ENST00000497653 ESCO1Q5FWF5 840 aa23.98■■□□□ 1.43
PCBP4-217ENST00000497653 ATAD2Q6PL18 1390 aa23.98■■□□□ 1.43
PCBP4-217ENST00000497653 KIF1BO60333 1816 aa23.97■■□□□ 1.43
PCBP4-217ENST00000497653 SLC4A1APQ9BWU0 796 aaKnown RBP23.96■■□□□ 1.43
PCBP4-217ENST00000497653 FOXO3O43524 673 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms