RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 EID1Q9Y6B2 187 aa23.85■■□□□ 1.41
FAM3A-220ENST00000497506 NPHP4O75161 1426 aaPredicted RBP23.84■■□□□ 1.41
FAM3A-220ENST00000497506 IQGAP1P46940 1657 aa23.83■■□□□ 1.4
FAM3A-220ENST00000497506 ZNF326Q5BKZ1 582 aaKnown RBP23.8■■□□□ 1.4
FAM3A-220ENST00000497506 SPATA31E1Q6ZUB1 1445 aa23.8■■□□□ 1.4
FAM3A-220ENST00000497506 HDGFP51858 240 aaKnown RBP23.79■■□□□ 1.4
FAM3A-220ENST00000497506 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.79■■□□□ 1.4
FAM3A-220ENST00000497506 NEXMIFQ5QGS0 1516 aa23.79■■□□□ 1.4
FAM3A-220ENST00000497506 DHX57Q6P158 1386 aaKnown RBP23.78■■□□□ 1.4
FAM3A-220ENST00000497506 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
FAM3A-220ENST00000497506 PLEKHG1Q9ULL1 1385 aa23.75■■□□□ 1.39
FAM3A-220ENST00000497506 PPLO60437 1756 aa23.74■■□□□ 1.39
FAM3A-220ENST00000497506 PPP1R15AO75807 674 aaPredicted RBP23.74■■□□□ 1.39
FAM3A-220ENST00000497506 RPGRIP1LQ68CZ1 1315 aa23.74■■□□□ 1.39
FAM3A-220ENST00000497506 RGL3Q3MIN7 710 aa23.73■■□□□ 1.39
FAM3A-220ENST00000497506 IFT172Q9UG01 1749 aa23.71■■□□□ 1.39
FAM3A-220ENST00000497506 SENP3Q9H4L4 574 aaPredicted RBP23.69■■□□□ 1.38
FAM3A-220ENST00000497506 ZNF335Q9H4Z2 1342 aaPredicted RBP23.68■■□□□ 1.38
FAM3A-220ENST00000497506 SLC26A8Q96RN1 970 aa23.68■■□□□ 1.38
FAM3A-220ENST00000497506 LTBP4Q8N2S1 1624 aa23.67■■□□□ 1.38
FAM3A-220ENST00000497506 NRXN3Q9Y4C0 1643 aa23.67■■□□□ 1.38
FAM3A-220ENST00000497506 BCANQ96GW7 911 aa23.67■■□□□ 1.38
FAM3A-220ENST00000497506 ADAMTS13Q76LX8 1427 aa23.67■■□□□ 1.38
FAM3A-220ENST00000497506 SETBP1Q9Y6X0 1596 aa23.66■■□□□ 1.38
FAM3A-220ENST00000497506 VGFO15240 615 aaPredicted RBP23.66■■□□□ 1.38
FAM3A-220ENST00000497506 STRCP1A6NGW2 1772 aa23.63■■□□□ 1.37
FAM3A-220ENST00000497506 TBX22Q9Y458 520 aa23.63■■□□□ 1.37
FAM3A-220ENST00000497506 DIP2AQ14689 1571 aa23.62■■□□□ 1.37
FAM3A-220ENST00000497506 SIN3AQ96ST3 1273 aa23.62■■□□□ 1.37
FAM3A-220ENST00000497506 ADGRF5Q8IZF2 1346 aa23.61■■□□□ 1.37
FAM3A-220ENST00000497506 MYOM2P54296 1465 aa23.58■■□□□ 1.37
FAM3A-220ENST00000497506 CHD2O14647 1828 aaKnown RBP23.58■■□□□ 1.37
FAM3A-220ENST00000497506 SETD1AO15047 1707 aaKnown RBP23.57■■□□□ 1.36
FAM3A-220ENST00000497506 NRXN1Q9ULB1 1477 aa23.56■■□□□ 1.36
FAM3A-220ENST00000497506 ALKQ9UM73 1620 aa23.56■■□□□ 1.36
FAM3A-220ENST00000497506 CPS1P31327 1500 aa23.56■■□□□ 1.36
FAM3A-220ENST00000497506 KCNA6P17658 529 aa23.55■■□□□ 1.36
FAM3A-220ENST00000497506 DCAF11Q8TEB1 546 aa23.55■■□□□ 1.36
FAM3A-220ENST00000497506 PIK3C2GO75747 1445 aa23.55■■□□□ 1.36
FAM3A-220ENST00000497506 NWD1Q149M9 1564 aa23.55■■□□□ 1.36
FAM3A-220ENST00000497506 PIK3R4Q99570 1358 aa23.54■■□□□ 1.36
FAM3A-220ENST00000497506 NEUROD1Q13562 356 aa23.54■■□□□ 1.36
FAM3A-220ENST00000497506 CERKQ8TCT0 537 aa23.54■■□□□ 1.36
FAM3A-220ENST00000497506 METP08581 1390 aa23.52■■□□□ 1.36
FAM3A-220ENST00000497506 STAC3Q96MF2 364 aa23.52■■□□□ 1.36
FAM3A-220ENST00000497506 PTPRUQ92729 1446 aa23.51■■□□□ 1.35
FAM3A-220ENST00000497506 KDM2AQ9Y2K7 1162 aa23.51■■□□□ 1.35
FAM3A-220ENST00000497506 LRRC7Q96NW7 1537 aa23.49■■□□□ 1.35
FAM3A-220ENST00000497506 L3MBTL2Q969R5 705 aa23.48■■□□□ 1.35
FAM3A-220ENST00000497506 NKTRP30414 1462 aaKnown RBP23.48■■□□□ 1.35
FAM3A-220ENST00000497506 XRN1Q8IZH2 1706 aaKnown RBP23.47■■□□□ 1.35
FAM3A-220ENST00000497506 AMOTL2Q9Y2J4 779 aa23.47■■□□□ 1.35
FAM3A-220ENST00000497506 IQSEC2Q5JU85 1478 aa23.46■■□□□ 1.35
FAM3A-220ENST00000497506 XIRP1Q702N8 1843 aaKnown RBP23.46■■□□□ 1.35
FAM3A-220ENST00000497506 C14orf93Q9H972 538 aaKnown RBP23.46■■□□□ 1.35
FAM3A-220ENST00000497506 LAMC1P11047 1609 aa23.45■■□□□ 1.34
FAM3A-220ENST00000497506 ASXL1Q8IXJ9 1541 aa23.44■■□□□ 1.34
FAM3A-220ENST00000497506 CLSPNQ9HAW4 1339 aa23.44■■□□□ 1.34
FAM3A-220ENST00000497506 CFAP70Q5T0N1 1121 aa23.44■■□□□ 1.34
FAM3A-220ENST00000497506 PROSER2Q86WR7 435 aaPredicted RBP23.42■■□□□ 1.34
FAM3A-220ENST00000497506 TMEM94Q12767 1356 aa23.4■■□□□ 1.34
FAM3A-220ENST00000497506 TMEM132EQ6IEE7 984 aa23.4■■□□□ 1.34
FAM3A-220ENST00000497506 CCER1Q8TC90 406 aaPredicted RBP23.4■■□□□ 1.34
FAM3A-220ENST00000497506 PRAG1Q86YV5 1406 aa23.4■■□□□ 1.34
FAM3A-220ENST00000497506 RBM33Q96EV2 1170 aaKnown RBP23.39■■□□□ 1.33
FAM3A-220ENST00000497506 TONSLQ96HA7 1378 aa23.38■■□□□ 1.33
FAM3A-220ENST00000497506 ADGRB1O14514 1584 aa23.37■■□□□ 1.33
FAM3A-220ENST00000497506 LRPPRCP42704 1394 aaKnown RBP23.37■■□□□ 1.33
FAM3A-220ENST00000497506 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
FAM3A-220ENST00000497506 YTHDC2Q9H6S0 1430 aaKnown RBP23.35■■□□□ 1.33
FAM3A-220ENST00000497506 PTCH1Q13635 1447 aa23.34■■□□□ 1.33
FAM3A-220ENST00000497506 KNDC1Q76NI1 1749 aa23.34■■□□□ 1.33
FAM3A-220ENST00000497506 ABCC11Q96J66 1382 aa23.34■■□□□ 1.33
FAM3A-220ENST00000497506 ROBO2Q9HCK4 1378 aa23.34■■□□□ 1.33
FAM3A-220ENST00000497506 TECPR2O15040 1411 aa23.33■■□□□ 1.33
FAM3A-220ENST00000497506 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.33
FAM3A-220ENST00000497506 STK26Q9P289 416 aa23.33■■□□□ 1.33
FAM3A-220ENST00000497506 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
FAM3A-220ENST00000497506 NBPF1Q3BBV0 1214 aa23.29■■□□□ 1.32
FAM3A-220ENST00000497506 NBPF8Q3BBV2 869 aa23.29■■□□□ 1.32
FAM3A-220ENST00000497506 FBXO41Q8TF61 875 aa23.28■■□□□ 1.32
FAM3A-220ENST00000497506 UBAP1LF5GYI3 381 aa23.27■■□□□ 1.32
FAM3A-220ENST00000497506 SIRT1Q96EB6 747 aa23.27■■□□□ 1.32
FAM3A-220ENST00000497506 NALCNQ8IZF0 1738 aa23.26■■□□□ 1.31
FAM3A-220ENST00000497506 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.26■■□□□ 1.31
FAM3A-220ENST00000497506 TIMELESSQ9UNS1 1208 aa23.26■■□□□ 1.31
FAM3A-220ENST00000497506 DLC1Q96QB1 1528 aa23.26■■□□□ 1.31
FAM3A-220ENST00000497506 MSH6P52701 1360 aa23.26■■□□□ 1.31
FAM3A-220ENST00000497506 C14orf37Q86TY3 774 aa23.25■■□□□ 1.31
FAM3A-220ENST00000497506 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
FAM3A-220ENST00000497506 TOM1O60784 492 aa23.24■■□□□ 1.31
FAM3A-220ENST00000497506 WAPLQ7Z5K2 1190 aa23.24■■□□□ 1.31
FAM3A-220ENST00000497506 C19orf44Q9H6X5 657 aa23.24■■□□□ 1.31
FAM3A-220ENST00000497506 PLEKHH1Q9ULM0 1364 aa23.24■■□□□ 1.31
FAM3A-220ENST00000497506 ADGRL3Q9HAR2 1447 aa23.24■■□□□ 1.31
FAM3A-220ENST00000497506 TRAK1Q9UPV9 953 aa23.23■■□□□ 1.31
FAM3A-220ENST00000497506 ARHGEF28Q8N1W1 1705 aaKnown RBP23.21■■□□□ 1.31
FAM3A-220ENST00000497506 DCCP43146 1447 aa23.19■■□□□ 1.3
FAM3A-220ENST00000497506 PRAM1Q96QH2 718 aa23.19■■□□□ 1.3
FAM3A-220ENST00000497506 RALGAPBQ86X10 1494 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms