RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	ANKLE2	Q86XL3	938 aa		11.9	□□□□□ -0.5
EFNA1-205	ENST00000497282	ANKRD30B	Q9BXX2	1392 aa		11.9	□□□□□ -0.5
EFNA1-205	ENST00000497282	NRXN3	Q9Y4C0	1643 aa		11.89	□□□□□ -0.51
EFNA1-205	ENST00000497282	SPATA31E1	Q6ZUB1	1445 aa		11.89	□□□□□ -0.51
EFNA1-205	ENST00000497282	LTBP4	Q8N2S1	1624 aa		11.89	□□□□□ -0.51
EFNA1-205	ENST00000497282	STRCP1	A6NGW2	1772 aa		11.88	□□□□□ -0.51
EFNA1-205	ENST00000497282	TXNDC2	Q86VQ3	553 aa		11.88	□□□□□ -0.51
EFNA1-205	ENST00000497282	DMRT2	Q9Y5R5	561 aa		11.88	□□□□□ -0.51
EFNA1-205	ENST00000497282	DHX57	Q6P158	1386 aa	Known RBP	11.87	□□□□□ -0.51
EFNA1-205	ENST00000497282	EID1	Q9Y6B2	187 aa		11.86	□□□□□ -0.51
EFNA1-205	ENST00000497282	PLEKHG1	Q9ULL1	1385 aa		11.86	□□□□□ -0.51
EFNA1-205	ENST00000497282	SETBP1	Q9Y6X0	1596 aa		11.86	□□□□□ -0.51
EFNA1-205	ENST00000497282	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.85	□□□□□ -0.51
EFNA1-205	ENST00000497282	SETD1A	O15047	1707 aa	Known RBP	11.85	□□□□□ -0.51
EFNA1-205	ENST00000497282	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.85	□□□□□ -0.51
EFNA1-205	ENST00000497282	DIP2A	Q14689	1571 aa		11.84	□□□□□ -0.51
EFNA1-205	ENST00000497282	ZNF326	Q5BKZ1	582 aa	Known RBP	11.84	□□□□□ -0.51
EFNA1-205	ENST00000497282	PCGF6	Q9BYE7	350 aa		11.84	□□□□□ -0.51
EFNA1-205	ENST00000497282	SENP3	Q9H4L4	574 aa	Predicted RBP	11.84	□□□□□ -0.51
EFNA1-205	ENST00000497282	ADAMTS13	Q76LX8	1427 aa		11.84	□□□□□ -0.51
EFNA1-205	ENST00000497282	NWD1	Q149M9	1564 aa		11.84	□□□□□ -0.51
EFNA1-205	ENST00000497282	PPP1R15A	O75807	674 aa	Predicted RBP	11.82	□□□□□ -0.52
EFNA1-205	ENST00000497282	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.82	□□□□□ -0.52
EFNA1-205	ENST00000497282	CHD2	O14647	1828 aa	Known RBP	11.81	□□□□□ -0.52
EFNA1-205	ENST00000497282	SLC26A8	Q96RN1	970 aa		11.81	□□□□□ -0.52
EFNA1-205	ENST00000497282	RGL3	Q3MIN7	710 aa		11.8	□□□□□ -0.52
EFNA1-205	ENST00000497282	XIRP1	Q702N8	1843 aa	Known RBP	11.8	□□□□□ -0.52
EFNA1-205	ENST00000497282	MYOM2	P54296	1465 aa		11.8	□□□□□ -0.52
EFNA1-205	ENST00000497282	CPS1	P31327	1500 aa		11.8	□□□□□ -0.52
EFNA1-205	ENST00000497282	NRXN1	Q9ULB1	1477 aa		11.79	□□□□□ -0.52
EFNA1-205	ENST00000497282	HDGF	P51858	240 aa	Known RBP	11.79	□□□□□ -0.52
EFNA1-205	ENST00000497282	XRN1	Q8IZH2	1706 aa	Known RBP	11.79	□□□□□ -0.52
EFNA1-205	ENST00000497282	RPGRIP1L	Q68CZ1	1315 aa		11.79	□□□□□ -0.52
EFNA1-205	ENST00000497282	ALK	Q9UM73	1620 aa		11.78	□□□□□ -0.52
EFNA1-205	ENST00000497282	ASXL1	Q8IXJ9	1541 aa		11.78	□□□□□ -0.52
EFNA1-205	ENST00000497282	ADGRF5	Q8IZF2	1346 aa		11.78	□□□□□ -0.52
EFNA1-205	ENST00000497282	PIK3C2G	O75747	1445 aa		11.77	□□□□□ -0.52
EFNA1-205	ENST00000497282	PTPRU	Q92729	1446 aa		11.77	□□□□□ -0.52
EFNA1-205	ENST00000497282	LRRC7	Q96NW7	1537 aa		11.77	□□□□□ -0.52
EFNA1-205	ENST00000497282	NKTR	P30414	1462 aa	Known RBP	11.76	□□□□□ -0.53
EFNA1-205	ENST00000497282	LAMC1	P11047	1609 aa		11.76	□□□□□ -0.53
EFNA1-205	ENST00000497282	BCAN	Q96GW7	911 aa		11.76	□□□□□ -0.53
EFNA1-205	ENST00000497282	VGF	O15240	615 aa	Predicted RBP	11.75	□□□□□ -0.53
EFNA1-205	ENST00000497282	CERK	Q8TCT0	537 aa		11.75	□□□□□ -0.53
EFNA1-205	ENST00000497282	SIN3A	Q96ST3	1273 aa		11.75	□□□□□ -0.53
EFNA1-205	ENST00000497282	TBX22	Q9Y458	520 aa		11.75	□□□□□ -0.53
EFNA1-205	ENST00000497282	MET	P08581	1390 aa		11.75	□□□□□ -0.53
EFNA1-205	ENST00000497282	IQSEC2	Q5JU85	1478 aa		11.75	□□□□□ -0.53
EFNA1-205	ENST00000497282	PIK3R4	Q99570	1358 aa		11.74	□□□□□ -0.53
EFNA1-205	ENST00000497282	KNDC1	Q76NI1	1749 aa		11.72	□□□□□ -0.53
EFNA1-205	ENST00000497282	KCNA6	P17658	529 aa		11.72	□□□□□ -0.53
EFNA1-205	ENST00000497282	PRAG1	Q86YV5	1406 aa		11.71	□□□□□ -0.53
EFNA1-205	ENST00000497282	ADGRB1	O14514	1584 aa		11.71	□□□□□ -0.54
EFNA1-205	ENST00000497282	NALCN	Q8IZF0	1738 aa		11.7	□□□□□ -0.54
EFNA1-205	ENST00000497282	DCAF11	Q8TEB1	546 aa		11.7	□□□□□ -0.54
EFNA1-205	ENST00000497282	KIAA1210	Q9ULL0	1709 aa		11.69	□□□□□ -0.54
EFNA1-205	ENST00000497282	TMEM94	Q12767	1356 aa		11.69	□□□□□ -0.54
EFNA1-205	ENST00000497282	NEUROD1	Q13562	356 aa		11.69	□□□□□ -0.54
EFNA1-205	ENST00000497282	KDM2A	Q9Y2K7	1162 aa		11.69	□□□□□ -0.54
EFNA1-205	ENST00000497282	CFAP70	Q5T0N1	1121 aa		11.68	□□□□□ -0.54
EFNA1-205	ENST00000497282	L3MBTL2	Q969R5	705 aa		11.68	□□□□□ -0.54
EFNA1-205	ENST00000497282	RBM33	Q96EV2	1170 aa	Known RBP	11.68	□□□□□ -0.54
EFNA1-205	ENST00000497282	AMOTL2	Q9Y2J4	779 aa		11.68	□□□□□ -0.54
EFNA1-205	ENST00000497282	PTCH1	Q13635	1447 aa		11.68	□□□□□ -0.54
EFNA1-205	ENST00000497282	TRPM1	Q7Z4N2	1603 aa		11.68	□□□□□ -0.54
EFNA1-205	ENST00000497282	C14orf93	Q9H972	538 aa	Known RBP	11.67	□□□□□ -0.54
EFNA1-205	ENST00000497282	TECPR2	O15040	1411 aa		11.67	□□□□□ -0.54
EFNA1-205	ENST00000497282	ROBO2	Q9HCK4	1378 aa		11.67	□□□□□ -0.54
EFNA1-205	ENST00000497282	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.66	□□□□□ -0.54
EFNA1-205	ENST00000497282	TMEM132E	Q6IEE7	984 aa		11.66	□□□□□ -0.54
EFNA1-205	ENST00000497282	PROSER2	Q86WR7	435 aa	Predicted RBP	11.66	□□□□□ -0.54
EFNA1-205	ENST00000497282	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.66	□□□□□ -0.54
EFNA1-205	ENST00000497282	LRPPRC	P42704	1394 aa	Known RBP	11.66	□□□□□ -0.54
EFNA1-205	ENST00000497282	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.65	□□□□□ -0.54
EFNA1-205	ENST00000497282	STAC3	Q96MF2	364 aa		11.64	□□□□□ -0.55
EFNA1-205	ENST00000497282	TONSL	Q96HA7	1378 aa		11.64	□□□□□ -0.55
EFNA1-205	ENST00000497282	ADGRL3	Q9HAR2	1447 aa		11.63	□□□□□ -0.55
EFNA1-205	ENST00000497282	NCOA3	Q9Y6Q9	1424 aa		11.63	□□□□□ -0.55
EFNA1-205	ENST00000497282	FBXO41	Q8TF61	875 aa		11.63	□□□□□ -0.55
EFNA1-205	ENST00000497282	DLC1	Q96QB1	1528 aa		11.63	□□□□□ -0.55
EFNA1-205	ENST00000497282	ABCC11	Q96J66	1382 aa		11.63	□□□□□ -0.55
EFNA1-205	ENST00000497282	CLSPN	Q9HAW4	1339 aa		11.62	□□□□□ -0.55
EFNA1-205	ENST00000497282	PLEKHH1	Q9ULM0	1364 aa		11.62	□□□□□ -0.55
EFNA1-205	ENST00000497282	STK26	Q9P289	416 aa		11.61	□□□□□ -0.55
EFNA1-205	ENST00000497282	MSH6	P52701	1360 aa		11.61	□□□□□ -0.55
EFNA1-205	ENST00000497282	CDC42BPG	Q6DT37	1551 aa		11.61	□□□□□ -0.55
EFNA1-205	ENST00000497282	FAM135B	Q49AJ0	1406 aa		11.6	□□□□□ -0.55
EFNA1-205	ENST00000497282	UBAP1L	F5GYI3	381 aa		11.6	□□□□□ -0.55
EFNA1-205	ENST00000497282	NBPF8	Q3BBV2	869 aa		11.6	□□□□□ -0.55
EFNA1-205	ENST00000497282	ILDR1	Q86SU0	546 aa	Predicted RBP	11.6	□□□□□ -0.55
EFNA1-205	ENST00000497282	CCER1	Q8TC90	406 aa	Predicted RBP	11.6	□□□□□ -0.55
EFNA1-205	ENST00000497282	DCC	P43146	1447 aa		11.6	□□□□□ -0.55
EFNA1-205	ENST00000497282	ROBO1	Q9Y6N7	1651 aa		11.59	□□□□□ -0.55
EFNA1-205	ENST00000497282	RALGAPB	Q86X10	1494 aa		11.59	□□□□□ -0.55
EFNA1-205	ENST00000497282	NBPF1	Q3BBV0	1214 aa		11.59	□□□□□ -0.55
EFNA1-205	ENST00000497282	ADGRB2	O60241	1585 aa		11.58	□□□□□ -0.55
EFNA1-205	ENST00000497282	FMN2	Q9NZ56	1722 aa		11.58	□□□□□ -0.56
EFNA1-205	ENST00000497282	WAPL	Q7Z5K2	1190 aa		11.58	□□□□□ -0.56
EFNA1-205	ENST00000497282	C14orf37	Q86TY3	774 aa		11.57	□□□□□ -0.56
EFNA1-205	ENST00000497282	MST1R	Q04912	1400 aa		11.57	□□□□□ -0.56

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