RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 NBPF3Q9H094 633 aa11.41□□□□□ -0.58
MSH5-219ENST00000497269 NCAPD3P42695 1498 aa11.39□□□□□ -0.59
MSH5-219ENST00000497269 ATAD2BQ9ULI0 1458 aa11.39□□□□□ -0.59
MSH5-219ENST00000497269 PARP9Q8IXQ6 854 aa11.39□□□□□ -0.59
MSH5-219ENST00000497269 REPIN1Q9BWE0 567 aaKnown RBP11.39□□□□□ -0.59
MSH5-219ENST00000497269 NESP48681 1621 aa11.38□□□□□ -0.59
MSH5-219ENST00000497269 RNF40O75150 1001 aa11.38□□□□□ -0.59
MSH5-219ENST00000497269 DNAJB2P25686 324 aa11.38□□□□□ -0.59
MSH5-219ENST00000497269 AMHR2Q16671 573 aa11.38□□□□□ -0.59
MSH5-219ENST00000497269 BHMG1C9JSJ3 638 aaPredicted RBP11.37□□□□□ -0.59
MSH5-219ENST00000497269 HRO43593 1189 aa11.37□□□□□ -0.59
MSH5-219ENST00000497269 SMARCA4P51532 1647 aa11.36□□□□□ -0.59
MSH5-219ENST00000497269 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.36□□□□□ -0.59
MSH5-219ENST00000497269 GOLGA8CPA6NN73 597 aa11.36□□□□□ -0.59
MSH5-219ENST00000497269 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
MSH5-219ENST00000497269 GIGYF2Q6Y7W6 1299 aaKnown RBP11.36□□□□□ -0.59
MSH5-219ENST00000497269 KDM4CQ9H3R0 1056 aa11.36□□□□□ -0.59
MSH5-219ENST00000497269 GPCPD1Q9NPB8 672 aa11.36□□□□□ -0.59
MSH5-219ENST00000497269 CLCN1P35523 988 aa11.35□□□□□ -0.59
MSH5-219ENST00000497269 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
MSH5-219ENST00000497269 SAMD7Q7Z3H4 446 aa11.34□□□□□ -0.59
MSH5-219ENST00000497269 ZFRQ96KR1 1074 aaKnown RBP11.34□□□□□ -0.59
MSH5-219ENST00000497269 TMEM134Q9H6X4 195 aa11.33□□□□□ -0.6
MSH5-219ENST00000497269 DDX11L8A8MPP1 907 aa11.32□□□□□ -0.6
MSH5-219ENST00000497269 HDGFP51858 240 aaKnown RBP11.31□□□□□ -0.6
MSH5-219ENST00000497269 LAPTM4BQ86VI4 370 aa11.31□□□□□ -0.6
MSH5-219ENST00000497269 SMARCA2P51531 1590 aa11.3□□□□□ -0.6
MSH5-219ENST00000497269 MS4A1P11836 297 aa11.3□□□□□ -0.6
MSH5-219ENST00000497269 RDH13Q8NBN7 331 aa11.3□□□□□ -0.6
MSH5-219ENST00000497269 DAXXQ9UER7 740 aaPredicted RBP11.3□□□□□ -0.6
MSH5-219ENST00000497269 BAZ1BQ9UIG0 1483 aaKnown RBP11.3□□□□□ -0.6
MSH5-219ENST00000497269 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
MSH5-219ENST00000497269 CUX2O14529 1486 aa11.28□□□□□ -0.6
MSH5-219ENST00000497269 BCAMP50895 628 aa11.28□□□□□ -0.6
MSH5-219ENST00000497269 IL27Q8NEV9 243 aa11.28□□□□□ -0.6
MSH5-219ENST00000497269 WNT2BQ93097 391 aa11.28□□□□□ -0.6
MSH5-219ENST00000497269 KCTD12Q96CX2 325 aaKnown RBP11.28□□□□□ -0.6
MSH5-219ENST00000497269 TMUB1Q9BVT8 246 aa11.28□□□□□ -0.6
MSH5-219ENST00000497269 FAM217BQ9NTX9 383 aaPredicted RBP11.28□□□□□ -0.6
MSH5-219ENST00000497269 MROH2BQ7Z745 1585 aa11.28□□□□□ -0.6
MSH5-219ENST00000497269 ANKK1Q8NFD2 765 aa11.27□□□□□ -0.61
MSH5-219ENST00000497269 LRCH3Q96II8 777 aa11.27□□□□□ -0.61
MSH5-219ENST00000497269 FAM117AQ9C073 453 aa11.27□□□□□ -0.61
MSH5-219ENST00000497269 BAZ1AQ9NRL2 1556 aaPredicted RBP11.26□□□□□ -0.61
MSH5-219ENST00000497269 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.26□□□□□ -0.61
MSH5-219ENST00000497269 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
MSH5-219ENST00000497269 BEGAINQ9BUH8 593 aa11.24□□□□□ -0.61
MSH5-219ENST00000497269 SLC4A3P48751 1232 aa11.23□□□□□ -0.61
MSH5-219ENST00000497269 SULF1Q8IWU6 871 aa11.23□□□□□ -0.61
MSH5-219ENST00000497269 SLF2Q8IX21 1173 aa11.23□□□□□ -0.61
MSH5-219ENST00000497269 SLC10A3P09131 477 aa11.22□□□□□ -0.61
MSH5-219ENST00000497269 HPS5Q9UPZ3 1129 aa11.22□□□□□ -0.61
MSH5-219ENST00000497269 MYT1LQ9UL68 1186 aa11.21□□□□□ -0.61
MSH5-219ENST00000497269 CD46P15529 392 aa11.2□□□□□ -0.62
MSH5-219ENST00000497269 SOWAHBA6NEL2 793 aa11.19□□□□□ -0.62
MSH5-219ENST00000497269 PTPN5P54829 565 aa11.19□□□□□ -0.62
MSH5-219ENST00000497269 PLEKHG3A1L390 1219 aa11.18□□□□□ -0.62
MSH5-219ENST00000497269 CFHP08603 1231 aa11.18□□□□□ -0.62
MSH5-219ENST00000497269 RSPH4AQ5TD94 716 aa11.18□□□□□ -0.62
MSH5-219ENST00000497269 KIF21AQ7Z4S6 1674 aa11.17□□□□□ -0.62
MSH5-219ENST00000497269 PPP4CP60510 307 aa11.17□□□□□ -0.62
MSH5-219ENST00000497269 THSD4Q6ZMP0 1018 aa11.17□□□□□ -0.62
MSH5-219ENST00000497269 SPNS2Q8IVW8 549 aa11.17□□□□□ -0.62
MSH5-219ENST00000497269 DDRGK1Q96HY6 314 aa11.17□□□□□ -0.62
MSH5-219ENST00000497269 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
MSH5-219ENST00000497269 ATP1B4Q9UN42 357 aaPredicted RBP11.17□□□□□ -0.62
MSH5-219ENST00000497269 WIZO95785 1651 aa11.16□□□□□ -0.62
MSH5-219ENST00000497269 NUTM1Q86Y26 1132 aa11.15□□□□□ -0.62
MSH5-219ENST00000497269 WBP1LQ9NX94 342 aa11.15□□□□□ -0.62
MSH5-219ENST00000497269 TSR3Q9UJK0 312 aaKnown RBP11.15□□□□□ -0.62
MSH5-219ENST00000497269 THOC2Q8NI27 1593 aaKnown RBP11.15□□□□□ -0.62
MSH5-219ENST00000497269 PEG3Q9GZU2 1588 aa11.15□□□□□ -0.62
MSH5-219ENST00000497269 LAMC3Q9Y6N6 1575 aa11.13□□□□□ -0.63
MSH5-219ENST00000497269 GCGRP47871 477 aa11.12□□□□□ -0.63
MSH5-219ENST00000497269 SPIRE2Q8WWL2 714 aa11.12□□□□□ -0.63
MSH5-219ENST00000497269 RNF166Q96A37 237 aaPredicted RBP11.12□□□□□ -0.63
MSH5-219ENST00000497269 TBC1D2Q9BYX2 928 aa11.12□□□□□ -0.63
MSH5-219ENST00000497269 KMT5BQ4FZB7 885 aa11.11□□□□□ -0.63
MSH5-219ENST00000497269 POLR3EQ9NVU0 708 aa11.11□□□□□ -0.63
MSH5-219ENST00000497269 PDS5BQ9NTI5 1447 aa11.1□□□□□ -0.63
MSH5-219ENST00000497269 KDM4AO75164 1064 aa11.1□□□□□ -0.63
MSH5-219ENST00000497269 APLP1P51693 650 aa11.1□□□□□ -0.63
MSH5-219ENST00000497269 FUT2Q10981 343 aa11.1□□□□□ -0.63
MSH5-219ENST00000497269 PUS10Q3MIT2 529 aaKnown RBP11.1□□□□□ -0.63
MSH5-219ENST00000497269 HLA-CQ95604 372 aa11.1□□□□□ -0.63
MSH5-219ENST00000497269 CADPSQ9ULU8 1353 aa11.09□□□□□ -0.63
MSH5-219ENST00000497269 NDUFV2P19404 249 aa11.09□□□□□ -0.63
MSH5-219ENST00000497269 GUCA2AQ02747 115 aa11.08□□□□□ -0.64
MSH5-219ENST00000497269 CSPP1Q1MSJ5 1256 aa11.08□□□□□ -0.64
MSH5-219ENST00000497269 TMEM132AQ24JP5 1023 aa11.08□□□□□ -0.64
MSH5-219ENST00000497269 MYSM1Q5VVJ2 828 aa11.07□□□□□ -0.64
MSH5-219ENST00000497269 NECTIN2Q92692 538 aa11.07□□□□□ -0.64
MSH5-219ENST00000497269 MOXD2PA6NHM9 499 aa11.06□□□□□ -0.64
MSH5-219ENST00000497269 HOXA2O43364 376 aa11.04□□□□□ -0.64
MSH5-219ENST00000497269 ACTN4O43707 911 aaKnown RBP11.04□□□□□ -0.64
MSH5-219ENST00000497269 COPS2P61201 443 aa11.04□□□□□ -0.64
MSH5-219ENST00000497269 RSPH6AQ9H0K4 717 aa11.04□□□□□ -0.64
MSH5-219ENST00000497269 PCDHB3Q9Y5E6 796 aa11.04□□□□□ -0.64
MSH5-219ENST00000497269 CLK2P49760 499 aaKnown RBP11.03□□□□□ -0.64
MSH5-219ENST00000497269 MMRN1Q13201 1228 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms