RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 SLAIN2Q9P270 581 aa17.65■□□□□ 0.42
LRP8-211ENST00000496580 MYO5BQ9ULV0 1848 aa17.65■□□□□ 0.42
LRP8-211ENST00000496580 CHD2O14647 1828 aaKnown RBP17.64■□□□□ 0.41
LRP8-211ENST00000496580 BCANQ96GW7 911 aa17.63■□□□□ 0.41
LRP8-211ENST00000496580 ZFYVE9O95405 1425 aa17.62■□□□□ 0.41
LRP8-211ENST00000496580 GCC2Q8IWJ2 1684 aa17.61■□□□□ 0.41
LRP8-211ENST00000496580 UPF1Q92900 1129 aaKnown RBP eCLIP17.61■□□□□ 0.41
LRP8-211ENST00000496580 CHIC2Q9UKJ5 165 aa17.61■□□□□ 0.41
LRP8-211ENST00000496580 TRIM52Q96A61 297 aa17.6■□□□□ 0.41
LRP8-211ENST00000496580 PLEKHG1Q9ULL1 1385 aa17.59■□□□□ 0.41
LRP8-211ENST00000496580 SHPRHQ149N8 1683 aa17.58■□□□□ 0.41
LRP8-211ENST00000496580 AHDC1Q5TGY3 1603 aaPredicted RBP17.58■□□□□ 0.4
LRP8-211ENST00000496580 FGD6Q6ZV73 1430 aa17.57■□□□□ 0.4
LRP8-211ENST00000496580 RIMS2Q9UQ26 1411 aa17.57■□□□□ 0.4
LRP8-211ENST00000496580 ANKRD30AQ9BXX3 1397 aa17.57■□□□□ 0.4
LRP8-211ENST00000496580 MEX3CQ5U5Q3 659 aaKnown RBP17.57■□□□□ 0.4
LRP8-211ENST00000496580 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.57■□□□□ 0.4
LRP8-211ENST00000496580 SPATA31A6Q5VVP1 1343 aa17.56■□□□□ 0.4
LRP8-211ENST00000496580 SLC52A1Q9NWF4 448 aa17.56■□□□□ 0.4
LRP8-211ENST00000496580 TMEM131LA2VDJ0 1609 aa17.56■□□□□ 0.4
LRP8-211ENST00000496580 LOC105371045A0A1W2PR82 267 aa17.55■□□□□ 0.4
LRP8-211ENST00000496580 SRCAPQ6ZRS2 3230 aa17.55■□□□□ 0.4
LRP8-211ENST00000496580 PPP1R15AO75807 674 aaPredicted RBP17.54■□□□□ 0.4
LRP8-211ENST00000496580 DIP2AQ14689 1571 aa17.53■□□□□ 0.4
LRP8-211ENST00000496580 ZNF772Q68DY9 489 aaPredicted RBP17.53■□□□□ 0.4
LRP8-211ENST00000496580 RPRD2Q5VT52 1461 aaKnown RBP17.52■□□□□ 0.4
LRP8-211ENST00000496580 C14orf37Q86TY3 774 aa17.52■□□□□ 0.4
LRP8-211ENST00000496580 ADAMTS13Q76LX8 1427 aa17.52■□□□□ 0.4
LRP8-211ENST00000496580 ADGRL2O95490 1459 aa17.51■□□□□ 0.39
LRP8-211ENST00000496580 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
LRP8-211ENST00000496580 NCOA3Q9Y6Q9 1424 aa17.51■□□□□ 0.39
LRP8-211ENST00000496580 TBX22Q9Y458 520 aa17.49■□□□□ 0.39
LRP8-211ENST00000496580 NUTM2BA6NNL0 878 aaPredicted RBP17.48■□□□□ 0.39
LRP8-211ENST00000496580 NUTM2EB1AL46 878 aaPredicted RBP17.48■□□□□ 0.39
LRP8-211ENST00000496580 RXRBP28702 533 aa17.48■□□□□ 0.39
LRP8-211ENST00000496580 NUTM2AQ8IVF1 878 aaPredicted RBP17.48■□□□□ 0.39
LRP8-211ENST00000496580 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
LRP8-211ENST00000496580 CHGAP10645 457 aaKnown RBP17.47■□□□□ 0.39
LRP8-211ENST00000496580 BRINP3Q76B58 766 aa17.47■□□□□ 0.39
LRP8-211ENST00000496580 CADPS2Q86UW7 1296 aa17.47■□□□□ 0.39
LRP8-211ENST00000496580 CDK12Q9NYV4 1490 aaPredicted RBP17.46■□□□□ 0.39
LRP8-211ENST00000496580 ATF3P18847 181 aa17.46■□□□□ 0.39
LRP8-211ENST00000496580 C19orf44Q9H6X5 657 aa17.46■□□□□ 0.39
LRP8-211ENST00000496580 ANKRD50Q9ULJ7 1429 aa17.46■□□□□ 0.39
LRP8-211ENST00000496580 AFF2P51816 1311 aa17.46■□□□□ 0.38
LRP8-211ENST00000496580 ASXL1Q8IXJ9 1541 aa17.45■□□□□ 0.38
LRP8-211ENST00000496580 E9PCH4 1651 aa17.45■□□□□ 0.38
LRP8-211ENST00000496580 TRPM2O94759 1503 aa17.44■□□□□ 0.38
LRP8-211ENST00000496580 RGS12O14924 1447 aa17.44■□□□□ 0.38
LRP8-211ENST00000496580 UNC13BO14795 1591 aa17.44■□□□□ 0.38
LRP8-211ENST00000496580 NHSL1Q5SYE7 1610 aa17.43■□□□□ 0.38
LRP8-211ENST00000496580 HDGFP51858 240 aaKnown RBP17.43■□□□□ 0.38
LRP8-211ENST00000496580 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.43■□□□□ 0.38
LRP8-211ENST00000496580 PIK3R4Q99570 1358 aa17.42■□□□□ 0.38
LRP8-211ENST00000496580 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
LRP8-211ENST00000496580 XRN1Q8IZH2 1706 aaKnown RBP17.41■□□□□ 0.38
LRP8-211ENST00000496580 NRXN3Q9Y4C0 1643 aa17.4■□□□□ 0.38
LRP8-211ENST00000496580 MST1RQ04912 1400 aa17.4■□□□□ 0.38
LRP8-211ENST00000496580 SETD5Q9C0A6 1442 aa17.4■□□□□ 0.38
LRP8-211ENST00000496580 DCCP43146 1447 aa17.39■□□□□ 0.38
LRP8-211ENST00000496580 APLP2Q06481 763 aa17.39■□□□□ 0.37
LRP8-211ENST00000496580 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
LRP8-211ENST00000496580 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
LRP8-211ENST00000496580 C8orf37Q96NL8 207 aa17.37■□□□□ 0.37
LRP8-211ENST00000496580 PNPLA6Q8IY17 1366 aa17.36■□□□□ 0.37
LRP8-211ENST00000496580 IQGAP3Q86VI3 1631 aa17.36■□□□□ 0.37
LRP8-211ENST00000496580 EP400Q96L91 3159 aa17.34■□□□□ 0.37
LRP8-211ENST00000496580 NALCNQ8IZF0 1738 aa17.34■□□□□ 0.37
LRP8-211ENST00000496580 QTRT2Q9H974 415 aaKnown RBP17.34■□□□□ 0.37
LRP8-211ENST00000496580 SETBP1Q9Y6X0 1596 aa17.34■□□□□ 0.37
LRP8-211ENST00000496580 RBM6P78332 1123 aaKnown RBP17.33■□□□□ 0.36
LRP8-211ENST00000496580 LRRC59Q96AG4 307 aaKnown RBP17.32■□□□□ 0.36
LRP8-211ENST00000496580 METP08581 1390 aa17.31■□□□□ 0.36
LRP8-211ENST00000496580 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
LRP8-211ENST00000496580 ADAMTS2O95450 1211 aa17.29■□□□□ 0.36
LRP8-211ENST00000496580 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.35
LRP8-211ENST00000496580 NUP155O75694 1391 aa17.26■□□□□ 0.35
LRP8-211ENST00000496580 ATAD2Q6PL18 1390 aa17.26■□□□□ 0.35
LRP8-211ENST00000496580 LAMC1P11047 1609 aa17.25■□□□□ 0.35
LRP8-211ENST00000496580 C1orf167Q5SNV9 1468 aa17.25■□□□□ 0.35
LRP8-211ENST00000496580 NGLY1Q96IV0 654 aa17.25■□□□□ 0.35
LRP8-211ENST00000496580 NEXMIFQ5QGS0 1516 aa17.23■□□□□ 0.35
LRP8-211ENST00000496580 ZNF326Q5BKZ1 582 aaKnown RBP17.23■□□□□ 0.35
LRP8-211ENST00000496580 ROCK1Q13464 1354 aa17.23■□□□□ 0.35
LRP8-211ENST00000496580 USP21Q9UK80 565 aa17.22■□□□□ 0.35
LRP8-211ENST00000496580 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
LRP8-211ENST00000496580 ATRNO75882 1429 aa17.21■□□□□ 0.34
LRP8-211ENST00000496580 ORAI2Q96SN7 254 aa17.2■□□□□ 0.34
LRP8-211ENST00000496580 SOS2Q07890 1332 aaPredicted RBP17.2■□□□□ 0.34
LRP8-211ENST00000496580 COL22A1Q8NFW1 1626 aaPredicted RBP17.19■□□□□ 0.34
LRP8-211ENST00000496580 TRPC5Q9UL62 973 aaPredicted RBP17.19■□□□□ 0.34
LRP8-211ENST00000496580 PTCH1Q13635 1447 aa17.18■□□□□ 0.34
LRP8-211ENST00000496580 FNBP4Q8N3X1 1017 aaPredicted RBP17.17■□□□□ 0.34
LRP8-211ENST00000496580 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
LRP8-211ENST00000496580 ROBO2Q9HCK4 1378 aa17.16■□□□□ 0.34
LRP8-211ENST00000496580 ITGAEP38570 1179 aa17.15■□□□□ 0.34
LRP8-211ENST00000496580 MYOM2P54296 1465 aa17.15■□□□□ 0.34
LRP8-211ENST00000496580 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
LRP8-211ENST00000496580 BCL9LQ86UU0 1499 aa17.13■□□□□ 0.33
LRP8-211ENST00000496580 KIF1BO60333 1816 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms