RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 NEUROD1Q13562 356 aa26.62■■□□□ 1.85
TSSC4-210ENST00000496468 HSPA2P54652 639 aa26.61■■□□□ 1.85
TSSC4-210ENST00000496468 SCAF11Q99590 1463 aaKnown RBP26.61■■□□□ 1.85
TSSC4-210ENST00000496468 RGL3Q3MIN7 710 aa26.6■■□□□ 1.85
TSSC4-210ENST00000496468 RPGRIP1LQ68CZ1 1315 aa26.57■■□□□ 1.84
TSSC4-210ENST00000496468 TONSLQ96HA7 1378 aa26.57■■□□□ 1.84
TSSC4-210ENST00000496468 MYOM2P54296 1465 aa26.56■■□□□ 1.84
TSSC4-210ENST00000496468 EID1Q9Y6B2 187 aa26.54■■□□□ 1.84
TSSC4-210ENST00000496468 STRCQ7RTU9 1775 aa26.53■■□□□ 1.84
TSSC4-210ENST00000496468 PPP1R15AO75807 674 aaPredicted RBP26.53■■□□□ 1.84
TSSC4-210ENST00000496468 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.53■■□□□ 1.84
TSSC4-210ENST00000496468 IQGAP1P46940 1657 aa26.52■■□□□ 1.84
TSSC4-210ENST00000496468 HDGFP51858 240 aaKnown RBP26.51■■□□□ 1.83
TSSC4-210ENST00000496468 ANKLE2Q86XL3 938 aa26.51■■□□□ 1.83
TSSC4-210ENST00000496468 TXNDC2Q86VQ3 553 aa26.5■■□□□ 1.83
TSSC4-210ENST00000496468 NUTM2DQ5VT03 806 aaPredicted RBP26.49■■□□□ 1.83
TSSC4-210ENST00000496468 MED14O60244 1454 aa26.49■■□□□ 1.83
TSSC4-210ENST00000496468 PLEKHG1Q9ULL1 1385 aa26.48■■□□□ 1.83
TSSC4-210ENST00000496468 LTKP29376 864 aa26.48■■□□□ 1.83
TSSC4-210ENST00000496468 NPHP4O75161 1426 aaPredicted RBP26.48■■□□□ 1.83
TSSC4-210ENST00000496468 SETBP1Q9Y6X0 1596 aa26.47■■□□□ 1.83
TSSC4-210ENST00000496468 NRXN1Q9ULB1 1477 aa26.47■■□□□ 1.83
TSSC4-210ENST00000496468 NCKAP5LQ9HCH0 1330 aa26.46■■□□□ 1.83
TSSC4-210ENST00000496468 DCAF11Q8TEB1 546 aa26.46■■□□□ 1.83
TSSC4-210ENST00000496468 NRXN3Q9Y4C0 1643 aa26.46■■□□□ 1.83
TSSC4-210ENST00000496468 VGFO15240 615 aaPredicted RBP26.45■■□□□ 1.82
TSSC4-210ENST00000496468 L3MBTL2Q969R5 705 aa26.45■■□□□ 1.82
TSSC4-210ENST00000496468 PIK3C2GO75747 1445 aa26.44■■□□□ 1.82
TSSC4-210ENST00000496468 DIP2AQ14689 1571 aa26.44■■□□□ 1.82
TSSC4-210ENST00000496468 LAMC1P11047 1609 aa26.43■■□□□ 1.82
TSSC4-210ENST00000496468 ADGRF5Q8IZF2 1346 aa26.41■■□□□ 1.82
TSSC4-210ENST00000496468 STAC3Q96MF2 364 aa26.41■■□□□ 1.82
TSSC4-210ENST00000496468 KDM2AQ9Y2K7 1162 aa26.41■■□□□ 1.82
TSSC4-210ENST00000496468 PRAG1Q86YV5 1406 aa26.39■■□□□ 1.82
TSSC4-210ENST00000496468 TIMELESSQ9UNS1 1208 aa26.39■■□□□ 1.82
TSSC4-210ENST00000496468 SETD1AO15047 1707 aaKnown RBP26.39■■□□□ 1.81
TSSC4-210ENST00000496468 BCANQ96GW7 911 aa26.38■■□□□ 1.81
TSSC4-210ENST00000496468 SENP3Q9H4L4 574 aaPredicted RBP26.37■■□□□ 1.81
TSSC4-210ENST00000496468 ADAMTS13Q76LX8 1427 aa26.37■■□□□ 1.81
TSSC4-210ENST00000496468 ALKQ9UM73 1620 aa26.36■■□□□ 1.81
TSSC4-210ENST00000496468 KIAA1210Q9ULL0 1709 aa26.35■■□□□ 1.81
TSSC4-210ENST00000496468 TRPM1Q7Z4N2 1603 aa26.32■■□□□ 1.8
TSSC4-210ENST00000496468 DMRT2Q9Y5R5 561 aa26.31■■□□□ 1.8
TSSC4-210ENST00000496468 ASXL1Q8IXJ9 1541 aa26.29■■□□□ 1.8
TSSC4-210ENST00000496468 SLC26A8Q96RN1 970 aa26.29■■□□□ 1.8
TSSC4-210ENST00000496468 RALGAPBQ86X10 1494 aa26.26■■□□□ 1.79
TSSC4-210ENST00000496468 NWD1Q149M9 1564 aa26.25■■□□□ 1.79
TSSC4-210ENST00000496468 TBX22Q9Y458 520 aa26.25■■□□□ 1.79
TSSC4-210ENST00000496468 ADGRB1O14514 1584 aa26.24■■□□□ 1.79
TSSC4-210ENST00000496468 METP08581 1390 aa26.23■■□□□ 1.79
TSSC4-210ENST00000496468 PIK3R4Q99570 1358 aa26.23■■□□□ 1.79
TSSC4-210ENST00000496468 CFAP70Q5T0N1 1121 aa26.23■■□□□ 1.79
TSSC4-210ENST00000496468 C14orf93Q9H972 538 aaKnown RBP26.23■■□□□ 1.79
TSSC4-210ENST00000496468 XRN1Q8IZH2 1706 aaKnown RBP26.22■■□□□ 1.79
TSSC4-210ENST00000496468 NBPF8Q3BBV2 869 aa26.22■■□□□ 1.79
TSSC4-210ENST00000496468 CHD2O14647 1828 aaKnown RBP26.21■■□□□ 1.79
TSSC4-210ENST00000496468 KNDC1Q76NI1 1749 aa26.21■■□□□ 1.79
TSSC4-210ENST00000496468 ROCK2O75116 1388 aaKnown RBP26.2■■□□□ 1.78
TSSC4-210ENST00000496468 PTPRUQ92729 1446 aa26.17■■□□□ 1.78
TSSC4-210ENST00000496468 STRCP1A6NGW2 1772 aa26.17■■□□□ 1.78
TSSC4-210ENST00000496468 NKTRP30414 1462 aaKnown RBP26.17■■□□□ 1.78
TSSC4-210ENST00000496468 YTHDC2Q9H6S0 1430 aaKnown RBP26.16■■□□□ 1.78
TSSC4-210ENST00000496468 CPS1P31327 1500 aa26.15■■□□□ 1.78
TSSC4-210ENST00000496468 TMEM132EQ6IEE7 984 aa26.14■■□□□ 1.78
TSSC4-210ENST00000496468 LRPPRCP42704 1394 aaKnown RBP26.14■■□□□ 1.78
TSSC4-210ENST00000496468 GPRASP1Q5JY77 1395 aa26.14■■□□□ 1.78
TSSC4-210ENST00000496468 PTCH1Q13635 1447 aa26.13■■□□□ 1.77
TSSC4-210ENST00000496468 ZNF335Q9H4Z2 1342 aaPredicted RBP26.13■■□□□ 1.77
TSSC4-210ENST00000496468 ARHGEF28Q8N1W1 1705 aaKnown RBP26.12■■□□□ 1.77
TSSC4-210ENST00000496468 NBPF1Q3BBV0 1214 aa26.12■■□□□ 1.77
TSSC4-210ENST00000496468 TECPR2O15040 1411 aa26.12■■□□□ 1.77
TSSC4-210ENST00000496468 ZEB1P37275 1124 aaPredicted RBP26.11■■□□□ 1.77
TSSC4-210ENST00000496468 DLC1Q96QB1 1528 aa26.1■■□□□ 1.77
TSSC4-210ENST00000496468 KCNA6P17658 529 aa26.1■■□□□ 1.77
TSSC4-210ENST00000496468 AMOTL2Q9Y2J4 779 aa26.08■■□□□ 1.77
TSSC4-210ENST00000496468 ABCC11Q96J66 1382 aa26.07■■□□□ 1.76
TSSC4-210ENST00000496468 STK26Q9P289 416 aa26.07■■□□□ 1.76
TSSC4-210ENST00000496468 LTBP4Q8N2S1 1624 aa26.06■■□□□ 1.76
TSSC4-210ENST00000496468 CARD11Q9BXL7 1154 aa26.06■■□□□ 1.76
TSSC4-210ENST00000496468 EIF3AQ14152 1382 aaKnown RBP26.04■■□□□ 1.76
TSSC4-210ENST00000496468 ROBO2Q9HCK4 1378 aa26.04■■□□□ 1.76
TSSC4-210ENST00000496468 TRAK1Q9UPV9 953 aa26.03■■□□□ 1.76
TSSC4-210ENST00000496468 FAM135BQ49AJ0 1406 aa26.02■■□□□ 1.76
TSSC4-210ENST00000496468 LRRC7Q96NW7 1537 aa26.01■■□□□ 1.75
TSSC4-210ENST00000496468 QRICH2Q9H0J4 1663 aa25.99■■□□□ 1.75
TSSC4-210ENST00000496468 USP47Q96K76 1375 aa25.98■■□□□ 1.75
TSSC4-210ENST00000496468 NALCNQ8IZF0 1738 aa25.98■■□□□ 1.75
TSSC4-210ENST00000496468 XIRP1Q702N8 1843 aaKnown RBP25.98■■□□□ 1.75
TSSC4-210ENST00000496468 TMEM94Q12767 1356 aa25.95■■□□□ 1.75
TSSC4-210ENST00000496468 PLEKHH1Q9ULM0 1364 aa25.95■■□□□ 1.75
TSSC4-210ENST00000496468 PROSER2Q86WR7 435 aaPredicted RBP25.95■■□□□ 1.74
TSSC4-210ENST00000496468 PRAM1Q96QH2 718 aa25.95■■□□□ 1.74
TSSC4-210ENST00000496468 SIRT1Q96EB6 747 aa25.94■■□□□ 1.74
TSSC4-210ENST00000496468 POGKQ9P215 609 aa25.93■■□□□ 1.74
TSSC4-210ENST00000496468 ADGRL3Q9HAR2 1447 aa25.93■■□□□ 1.74
TSSC4-210ENST00000496468 NCOA3Q9Y6Q9 1424 aa25.93■■□□□ 1.74
TSSC4-210ENST00000496468 CENPJQ9HC77 1338 aaPredicted RBP25.92■■□□□ 1.74
TSSC4-210ENST00000496468 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.92■■□□□ 1.74
TSSC4-210ENST00000496468 ADGRB2O60241 1585 aa25.92■■□□□ 1.74
TSSC4-210ENST00000496468 WAPLQ7Z5K2 1190 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms