RNA–Protein interactions for RNA: ENST00000496238.5

POLR1B-214, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 587 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-214ENST00000496238 IQGAP3Q86VI3 1631 aa28.1■■■□□ 2.09
POLR1B-214ENST00000496238 NKTRP30414 1462 aaKnown RBP28.09■■■□□ 2.09
POLR1B-214ENST00000496238 E9PCH4 1651 aa28.09■■■□□ 2.09
POLR1B-214ENST00000496238 PLEKHG1Q9ULL1 1385 aa28.09■■■□□ 2.09
POLR1B-214ENST00000496238 SENP3Q9H4L4 574 aaPredicted RBP28.08■■■□□ 2.09
POLR1B-214ENST00000496238 MYO5BQ9ULV0 1848 aa28.08■■■□□ 2.09
POLR1B-214ENST00000496238 RIMS2Q9UQ26 1411 aa28.08■■■□□ 2.09
POLR1B-214ENST00000496238 FAM135BQ49AJ0 1406 aa28.05■■■□□ 2.08
POLR1B-214ENST00000496238 PROSER2Q86WR7 435 aaPredicted RBP28.05■■■□□ 2.08
POLR1B-214ENST00000496238 BCANQ96GW7 911 aa28.05■■■□□ 2.08
POLR1B-214ENST00000496238 HDGFP51858 240 aaKnown RBP28.04■■■□□ 2.08
POLR1B-214ENST00000496238 NUP155O75694 1391 aa28.03■■■□□ 2.08
POLR1B-214ENST00000496238 ITGAEP38570 1179 aa28.03■■■□□ 2.08
POLR1B-214ENST00000496238 PPP1R15AO75807 674 aaPredicted RBP28.02■■■□□ 2.08
POLR1B-214ENST00000496238 PPARGC1BQ86YN6 1023 aaKnown RBP28.02■■■□□ 2.08
POLR1B-214ENST00000496238 RBM33Q96EV2 1170 aaKnown RBP28.01■■■□□ 2.07
POLR1B-214ENST00000496238 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.99■■■□□ 2.07
POLR1B-214ENST00000496238 CHGAP10645 457 aaKnown RBP27.98■■■□□ 2.07
POLR1B-214ENST00000496238 PHF23Q9BUL5 403 aaPredicted RBP27.98■■■□□ 2.07
POLR1B-214ENST00000496238 TBX22Q9Y458 520 aa27.97■■■□□ 2.07
POLR1B-214ENST00000496238 CHD2O14647 1828 aaKnown RBP27.97■■■□□ 2.07
POLR1B-214ENST00000496238 MSH6P52701 1360 aa27.95■■■□□ 2.06
POLR1B-214ENST00000496238 ROBO1Q9Y6N7 1651 aa27.94■■■□□ 2.06
POLR1B-214ENST00000496238 ADAMTS13Q76LX8 1427 aa27.94■■■□□ 2.06
POLR1B-214ENST00000496238 DIP2AQ14689 1571 aa27.92■■■□□ 2.06
POLR1B-214ENST00000496238 NUTM2DQ5VT03 806 aaPredicted RBP27.91■■■□□ 2.06
POLR1B-214ENST00000496238 RRBP1Q9P2E9 1410 aaKnown RBP27.9■■■□□ 2.06
POLR1B-214ENST00000496238 PIK3R4Q99570 1358 aa27.88■■■□□ 2.05
POLR1B-214ENST00000496238 NCOA3Q9Y6Q9 1424 aa27.88■■■□□ 2.05
POLR1B-214ENST00000496238 SLAIN2Q9P270 581 aa27.87■■■□□ 2.05
POLR1B-214ENST00000496238 SPHKAPQ2M3C7 1700 aa27.85■■■□□ 2.05
POLR1B-214ENST00000496238 TRPM2O94759 1503 aa27.82■■■□□ 2.04
POLR1B-214ENST00000496238 RGS17Q9UGC6 210 aaPredicted RBP27.82■■■□□ 2.04
POLR1B-214ENST00000496238 NAIPQ13075 1403 aa27.81■■■□□ 2.04
POLR1B-214ENST00000496238 PTPRUQ92729 1446 aa27.78■■■□□ 2.04
POLR1B-214ENST00000496238 NRXN3Q9Y4C0 1643 aa27.78■■■□□ 2.04
POLR1B-214ENST00000496238 SETBP1Q9Y6X0 1596 aa27.77■■■□□ 2.04
POLR1B-214ENST00000496238 C14orf37Q86TY3 774 aa27.76■■■□□ 2.03
POLR1B-214ENST00000496238 AMOTL2Q9Y2J4 779 aa27.76■■■□□ 2.03
POLR1B-214ENST00000496238 PHLPP1O60346 1717 aa27.75■■■□□ 2.03
POLR1B-214ENST00000496238 C19orf44Q9H6X5 657 aa27.75■■■□□ 2.03
POLR1B-214ENST00000496238 CADPS2Q86UW7 1296 aa27.74■■■□□ 2.03
POLR1B-214ENST00000496238 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.74■■■□□ 2.03
POLR1B-214ENST00000496238 CLTCL1P53675 1640 aa27.74■■■□□ 2.03
POLR1B-214ENST00000496238 ZNF326Q5BKZ1 582 aaKnown RBP27.73■■■□□ 2.03
POLR1B-214ENST00000496238 XRN1Q8IZH2 1706 aaKnown RBP27.71■■■□□ 2.03
POLR1B-214ENST00000496238 JCADQ9P266 1359 aa27.71■■■□□ 2.03
POLR1B-214ENST00000496238 COL16A1Q07092 1604 aaPredicted RBP27.7■■■□□ 2.03
POLR1B-214ENST00000496238 HFM1A2PYH4 1435 aa27.7■■■□□ 2.03
POLR1B-214ENST00000496238 ATF3P18847 181 aa27.7■■■□□ 2.02
POLR1B-214ENST00000496238 NEXMIFQ5QGS0 1516 aa27.7■■■□□ 2.02
POLR1B-214ENST00000496238 METP08581 1390 aa27.67■■■□□ 2.02
POLR1B-214ENST00000496238 DCCP43146 1447 aa27.67■■■□□ 2.02
POLR1B-214ENST00000496238 AHDC1Q5TGY3 1603 aaPredicted RBP27.66■■■□□ 2.02
POLR1B-214ENST00000496238 POTEAQ6S8J7 498 aa27.64■■■□□ 2.02
POLR1B-214ENST00000496238 KIF1BO60333 1816 aa27.62■■■□□ 2.01
POLR1B-214ENST00000496238 TRIM52Q96A61 297 aa27.61■■■□□ 2.01
POLR1B-214ENST00000496238 BRINP3Q76B58 766 aa27.6■■■□□ 2.01
POLR1B-214ENST00000496238 SPATA31A6Q5VVP1 1343 aa27.58■■■□□ 2.01
POLR1B-214ENST00000496238 SLC4A1APQ9BWU0 796 aaKnown RBP27.57■■■□□ 2
POLR1B-214ENST00000496238 MST1RQ04912 1400 aa27.57■■■□□ 2
POLR1B-214ENST00000496238 ADGRL3Q9HAR2 1447 aa27.56■■■□□ 2
POLR1B-214ENST00000496238 LRP6O75581 1613 aa27.56■■■□□ 2
POLR1B-214ENST00000496238 ASXL1Q8IXJ9 1541 aa27.55■■■□□ 2
POLR1B-214ENST00000496238 SHPRHQ149N8 1683 aa27.55■■■□□ 2
POLR1B-214ENST00000496238 VGFO15240 615 aaPredicted RBP27.53■■■□□ 2
POLR1B-214ENST00000496238 RPGRIP1LQ68CZ1 1315 aa27.52■■■□□ 2
POLR1B-214ENST00000496238 SETD1AO15047 1707 aaKnown RBP27.51■■□□□ 1.99
POLR1B-214ENST00000496238 PTCH1Q13635 1447 aa27.5■■□□□ 1.99
POLR1B-214ENST00000496238 NALCNQ8IZF0 1738 aa27.5■■□□□ 1.99
POLR1B-214ENST00000496238 PRAG1Q86YV5 1406 aa27.48■■□□□ 1.99
POLR1B-214ENST00000496238 NHSL1Q5SYE7 1610 aa27.47■■□□□ 1.99
POLR1B-214ENST00000496238 SETD5Q9C0A6 1442 aa27.47■■□□□ 1.99
POLR1B-214ENST00000496238 PPLO60437 1756 aa27.45■■□□□ 1.99
POLR1B-214ENST00000496238 MEX3CQ5U5Q3 659 aaKnown RBP27.45■■□□□ 1.98
POLR1B-214ENST00000496238 ROBO2Q9HCK4 1378 aa27.45■■□□□ 1.98
POLR1B-214ENST00000496238 FOXD1Q16676 465 aa27.43■■□□□ 1.98
POLR1B-214ENST00000496238 C1orf167Q5SNV9 1468 aa27.4■■□□□ 1.98
POLR1B-214ENST00000496238 ZNF772Q68DY9 489 aaPredicted RBP27.4■■□□□ 1.98
POLR1B-214ENST00000496238 CCDC144AA2RUR9 1427 aa27.4■■□□□ 1.98
POLR1B-214ENST00000496238 LRRC59Q96AG4 307 aaKnown RBP27.39■■□□□ 1.98
POLR1B-214ENST00000496238 NUTM2BA6NNL0 878 aaPredicted RBP27.37■■□□□ 1.97
POLR1B-214ENST00000496238 NUTM2EB1AL46 878 aaPredicted RBP27.37■■□□□ 1.97
POLR1B-214ENST00000496238 NUTM2AQ8IVF1 878 aaPredicted RBP27.37■■□□□ 1.97
POLR1B-214ENST00000496238 DDX17Q92841 729 aaKnown RBP27.37■■□□□ 1.97
POLR1B-214ENST00000496238 SPATA31E1Q6ZUB1 1445 aa27.36■■□□□ 1.97
POLR1B-214ENST00000496238 MPHOSPH9Q99550 1183 aa27.36■■□□□ 1.97
POLR1B-214ENST00000496238 LAMC1P11047 1609 aa27.34■■□□□ 1.97
POLR1B-214ENST00000496238 ADGRF5Q8IZF2 1346 aa27.34■■□□□ 1.97
POLR1B-214ENST00000496238 PNPLA6Q8IY17 1366 aa27.34■■□□□ 1.97
POLR1B-214ENST00000496238 ANKRD30BQ9BXX2 1392 aa27.31■■□□□ 1.96
POLR1B-214ENST00000496238 RGL3Q3MIN7 710 aa27.3■■□□□ 1.96
POLR1B-214ENST00000496238 ORAI2Q96SN7 254 aa27.3■■□□□ 1.96
POLR1B-214ENST00000496238 IFT172Q9UG01 1749 aa27.3■■□□□ 1.96
POLR1B-214ENST00000496238 AFF2P51816 1311 aa27.28■■□□□ 1.96
POLR1B-214ENST00000496238 CDC42BPGQ6DT37 1551 aa27.27■■□□□ 1.96
POLR1B-214ENST00000496238 TECPR2O15040 1411 aa27.27■■□□□ 1.96
POLR1B-214ENST00000496238 SOS2Q07890 1332 aaPredicted RBP27.27■■□□□ 1.96
POLR1B-214ENST00000496238 ACIN1Q9UKV3 1341 aaKnown RBP27.25■■□□□ 1.95
POLR1B-214ENST00000496238 RXRBP28702 533 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms