RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 GOLGA2Q08379 1002 aa8.44□□□□□ -1.06
XPA-204ENST00000496104 DCAF8Q5TAQ9 597 aa8.44□□□□□ -1.06
XPA-204ENST00000496104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.44□□□□□ -1.062e-6■■■■■ 26.9
XPA-204ENST00000496104 SCAPERQ9BY12 1400 aa8.44□□□□□ -1.06
XPA-204ENST00000496104 CTTNBP2Q8WZ74 1663 aa8.43□□□□□ -1.06
XPA-204ENST00000496104 POLR1AO95602 1720 aaPredicted RBP8.43□□□□□ -1.06
XPA-204ENST00000496104 PKD2Q13563 968 aa8.43□□□□□ -1.06
XPA-204ENST00000496104 NUP153P49790 1475 aaKnown RBP8.43□□□□□ -1.06
XPA-204ENST00000496104 SUPT6HQ7KZ85 1726 aaKnown RBP8.43□□□□□ -1.06
XPA-204ENST00000496104 IFFO2Q5TF58 517 aa8.42□□□□□ -1.06
XPA-204ENST00000496104 ZNF710Q8N1W2 664 aa8.42□□□□□ -1.06
XPA-204ENST00000496104 XIRP1Q702N8 1843 aaKnown RBP8.41□□□□□ -1.06
XPA-204ENST00000496104 DNMT1P26358 1616 aaKnown RBP8.41□□□□□ -1.06
XPA-204ENST00000496104 GOLGA3Q08378 1498 aa8.4□□□□□ -1.06
XPA-204ENST00000496104 LRP6O75581 1613 aa8.4□□□□□ -1.07
XPA-204ENST00000496104 RAPGEF6Q8TEU7 1601 aa8.4□□□□□ -1.07
XPA-204ENST00000496104 SYNMO15061 1565 aa8.39□□□□□ -1.07
XPA-204ENST00000496104 VARS2Q5ST30 1063 aaKnown RBP8.38□□□□□ -1.07
XPA-204ENST00000496104 CNTLNQ9NXG0 1405 aa8.37□□□□□ -1.07
XPA-204ENST00000496104 PLCB2Q00722 1185 aa8.37□□□□□ -1.07
XPA-204ENST00000496104 DPY19L2Q6NUT2 758 aa8.37□□□□□ -1.07
XPA-204ENST00000496104 FBXO3Q9UK99 471 aa8.37□□□□□ -1.07
XPA-204ENST00000496104 EP400Q96L91 3159 aa8.36□□□□□ -1.07
XPA-204ENST00000496104 DOK7Q18PE1 504 aa8.36□□□□□ -1.07
XPA-204ENST00000496104 ZMYM3Q14202 1370 aa8.35□□□□□ -1.07
XPA-204ENST00000496104 A2ML1A8K2U0 1454 aa8.35□□□□□ -1.07
XPA-204ENST00000496104 ZNF467Q7Z7K2 595 aaPredicted RBP8.35□□□□□ -1.07
XPA-204ENST00000496104 PLCH2O75038 1416 aa8.35□□□□□ -1.07
XPA-204ENST00000496104 CLTCQ00610 1675 aaKnown RBP8.34□□□□□ -1.07
XPA-204ENST00000496104 MED14O60244 1454 aa8.34□□□□□ -1.07
XPA-204ENST00000496104 ZNF518AQ6AHZ1 1483 aa8.34□□□□□ -1.07
XPA-204ENST00000496104 CDK12Q9NYV4 1490 aaPredicted RBP8.34□□□□□ -1.07
XPA-204ENST00000496104 TRIM52Q96A61 297 aa8.34□□□□□ -1.07
XPA-204ENST00000496104 MLH3Q9UHC1 1453 aa8.33□□□□□ -1.08
XPA-204ENST00000496104 LRP5O75197 1615 aa8.33□□□□□ -1.08
XPA-204ENST00000496104 KIDINS220Q9ULH0 1771 aa8.33□□□□□ -1.08
XPA-204ENST00000496104 PTGER2P43116 358 aa8.33□□□□□ -1.08
XPA-204ENST00000496104 FAM135BQ49AJ0 1406 aa8.33□□□□□ -1.08
XPA-204ENST00000496104 SAMD9Q5K651 1589 aa8.33□□□□□ -1.08
XPA-204ENST00000496104 AFAP1Q8N556 730 aa8.33□□□□□ -1.08
XPA-204ENST00000496104 BOLA1Q9Y3E2 137 aa8.33□□□□□ -1.08
XPA-204ENST00000496104 ROBO1Q9Y6N7 1651 aa8.33□□□□□ -1.08
XPA-204ENST00000496104 RGS12O14924 1447 aa8.32□□□□□ -1.08
XPA-204ENST00000496104 G3V3G9 751 aa8.32□□□□□ -1.08
XPA-204ENST00000496104 IFNLR1Q8IU57 520 aaPredicted RBP8.32□□□□□ -1.08
XPA-204ENST00000496104 ZNF687Q8N1G0 1237 aa8.32□□□□□ -1.08
XPA-204ENST00000496104 ZC3H13Q5T200 1668 aaKnown RBP8.31□□□□□ -1.08
XPA-204ENST00000496104 VASPP50552 380 aaPredicted RBP8.31□□□□□ -1.08
XPA-204ENST00000496104 DEPDC5O75140 1603 aa8.31□□□□□ -1.08
XPA-204ENST00000496104 IQGAP1P46940 1657 aa8.3□□□□□ -1.08
XPA-204ENST00000496104 CDK13Q14004 1512 aaKnown RBP8.3□□□□□ -1.08
XPA-204ENST00000496104 PSEN1P49768 467 aa8.3□□□□□ -1.08
XPA-204ENST00000496104 COL16A1Q07092 1604 aaPredicted RBP8.29□□□□□ -1.08
XPA-204ENST00000496104 RIMBP2O15034 1052 aa8.29□□□□□ -1.08
XPA-204ENST00000496104 NPHP4O75161 1426 aaPredicted RBP8.29□□□□□ -1.08
XPA-204ENST00000496104 ITSN2Q9NZM3 1697 aa8.28□□□□□ -1.08
XPA-204ENST00000496104 PLXNC1O60486 1568 aa8.28□□□□□ -1.08
XPA-204ENST00000496104 DAXXQ9UER7 740 aaPredicted RBP8.28□□□□□ -1.08
XPA-204ENST00000496104 ABCC1P33527 1531 aa8.28□□□□□ -1.08
XPA-204ENST00000496104 MAP3K1Q13233 1512 aa8.28□□□□□ -1.08
XPA-204ENST00000496104 MYO5CQ9NQX4 1742 aa8.27□□□□□ -1.09
XPA-204ENST00000496104 P3H3Q8IVL6 736 aa8.27□□□□□ -1.09
XPA-204ENST00000496104 KIF14Q15058 1648 aa8.26□□□□□ -1.09
XPA-204ENST00000496104 ANKRD13DQ6ZTN6 518 aa8.26□□□□□ -1.09
XPA-204ENST00000496104 RBM33Q96EV2 1170 aaKnown RBP8.26□□□□□ -1.09
XPA-204ENST00000496104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.25□□□□□ -1.09
XPA-204ENST00000496104 PHLPP1O60346 1717 aa8.24□□□□□ -1.09
XPA-204ENST00000496104 PLA2G2EQ9NZK7 142 aa8.24□□□□□ -1.09
XPA-204ENST00000496104 ZSWIM6Q9HCJ5 1215 aa8.23□□□□□ -1.09
XPA-204ENST00000496104 JCADQ9P266 1359 aa8.22□□□□□ -1.09
XPA-204ENST00000496104 GSE1Q14687 1217 aa8.22□□□□□ -1.09
XPA-204ENST00000496104 CABP2Q9NPB3 220 aa8.22□□□□□ -1.09
XPA-204ENST00000496104 CDC42BPBQ9Y5S2 1711 aa8.22□□□□□ -1.09
XPA-204ENST00000496104 NHSL1Q5SYE7 1610 aa8.21□□□□□ -1.09
XPA-204ENST00000496104 PRXQ9BXM0 1461 aa8.21□□□□□ -1.09
XPA-204ENST00000496104 PLEKHD1A6NEE1 506 aa8.21□□□□□ -1.1
XPA-204ENST00000496104 CHRM1P11229 460 aaPredicted RBP8.21□□□□□ -1.1
XPA-204ENST00000496104 RXRBP28702 533 aa8.21□□□□□ -1.1
XPA-204ENST00000496104 GPR153Q6NV75 609 aa8.21□□□□□ -1.1
XPA-204ENST00000496104 ESF1Q9H501 851 aaKnown RBP8.21□□□□□ -1.1
XPA-204ENST00000496104 CEP350Q5VT06 3117 aa8.21□□□□□ -1.1
XPA-204ENST00000496104 SHPRHQ149N8 1683 aa8.21□□□□□ -1.1
XPA-204ENST00000496104 BCL9LQ86UU0 1499 aa8.2□□□□□ -1.1
XPA-204ENST00000496104 DIP2AQ14689 1571 aa8.2□□□□□ -1.1
XPA-204ENST00000496104 PDAP1Q13442 181 aaKnown RBP8.2□□□□□ -1.1
XPA-204ENST00000496104 ZNF772Q68DY9 489 aaPredicted RBP8.2□□□□□ -1.1
XPA-204ENST00000496104 ATP7AQ04656 1500 aa8.19□□□□□ -1.1
XPA-204ENST00000496104 SAMD9LQ8IVG5 1584 aa8.19□□□□□ -1.1
XPA-204ENST00000496104 EFCAB2Q5VUJ9 269 aa8.19□□□□□ -1.1
XPA-204ENST00000496104 ARHGAP5Q13017 1502 aa8.19□□□□□ -1.1
XPA-204ENST00000496104 FBXO31Q5XUX0 539 aaPredicted RBP8.18□□□□□ -1.1
XPA-204ENST00000496104 TNRQ92752 1358 aa8.18□□□□□ -1.1
XPA-204ENST00000496104 KDM5DQ9BY66 1539 aa8.18□□□□□ -1.1
XPA-204ENST00000496104 UGGT1Q9NYU2 1555 aa8.18□□□□□ -1.1
XPA-204ENST00000496104 ANKLE2Q86XL3 938 aa8.17□□□□□ -1.1
XPA-204ENST00000496104 FGD6Q6ZV73 1430 aa8.17□□□□□ -1.1
XPA-204ENST00000496104 LSM11P83369 360 aaKnown RBP eCLIP8.16□□□□□ -1.1
XPA-204ENST00000496104 TMEM94Q12767 1356 aa8.16□□□□□ -1.1
XPA-204ENST00000496104 TIAM1Q13009 1591 aa8.16□□□□□ -1.1
XPA-204ENST00000496104 TMEM92Q6UXU6 159 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms