RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 XIRP1Q702N8 1843 aaKnown RBP25.8■■□□□ 1.72
APOBEC3A-204ENST00000495988 CHGAP10645 457 aaKnown RBP25.8■■□□□ 1.72
APOBEC3A-204ENST00000495988 ZFYVE9O95405 1425 aa25.8■■□□□ 1.72
APOBEC3A-204ENST00000495988 ILDR2Q71H61 639 aa25.79■■□□□ 1.72
APOBEC3A-204ENST00000495988 RIMS2Q9UQ26 1411 aa25.79■■□□□ 1.72
APOBEC3A-204ENST00000495988 PPP1R15AO75807 674 aaPredicted RBP25.78■■□□□ 1.72
APOBEC3A-204ENST00000495988 KCNA6P17658 529 aa25.78■■□□□ 1.72
APOBEC3A-204ENST00000495988 HDGFP51858 240 aaKnown RBP25.78■■□□□ 1.72
APOBEC3A-204ENST00000495988 SENP3Q9H4L4 574 aaPredicted RBP25.77■■□□□ 1.72
APOBEC3A-204ENST00000495988 PLEKHG1Q9ULL1 1385 aa25.75■■□□□ 1.71
APOBEC3A-204ENST00000495988 TMEM94Q12767 1356 aa25.74■■□□□ 1.71
APOBEC3A-204ENST00000495988 PROSER2Q86WR7 435 aaPredicted RBP25.72■■□□□ 1.71
APOBEC3A-204ENST00000495988 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.72■■□□□ 1.71
APOBEC3A-204ENST00000495988 NWD1Q149M9 1564 aa25.72■■□□□ 1.71
APOBEC3A-204ENST00000495988 NKTRP30414 1462 aaKnown RBP25.71■■□□□ 1.71
APOBEC3A-204ENST00000495988 NUTM2DQ5VT03 806 aaPredicted RBP25.68■■□□□ 1.7
APOBEC3A-204ENST00000495988 RBM33Q96EV2 1170 aaKnown RBP25.68■■□□□ 1.7
APOBEC3A-204ENST00000495988 NAIPQ13075 1403 aa25.68■■□□□ 1.7
APOBEC3A-204ENST00000495988 SPHKAPQ2M3C7 1700 aa25.68■■□□□ 1.7
APOBEC3A-204ENST00000495988 MED1Q15648 1581 aaPredicted RBP25.67■■□□□ 1.7
APOBEC3A-204ENST00000495988 CHD2O14647 1828 aaKnown RBP25.66■■□□□ 1.7
APOBEC3A-204ENST00000495988 TBX22Q9Y458 520 aa25.65■■□□□ 1.7
APOBEC3A-204ENST00000495988 ADAMTS13Q76LX8 1427 aa25.62■■□□□ 1.69
APOBEC3A-204ENST00000495988 DIP2AQ14689 1571 aa25.61■■□□□ 1.69
APOBEC3A-204ENST00000495988 SOCS7O14512 581 aa25.6■■□□□ 1.69
APOBEC3A-204ENST00000495988 FAM135BQ49AJ0 1406 aa25.6■■□□□ 1.69
APOBEC3A-204ENST00000495988 MSH6P52701 1360 aa25.59■■□□□ 1.69
APOBEC3A-204ENST00000495988 HFM1A2PYH4 1435 aa25.59■■□□□ 1.69
APOBEC3A-204ENST00000495988 ZNF326Q5BKZ1 582 aaKnown RBP25.57■■□□□ 1.68
APOBEC3A-204ENST00000495988 TRIM52Q96A61 297 aa25.56■■□□□ 1.68
APOBEC3A-204ENST00000495988 TRPM2O94759 1503 aa25.56■■□□□ 1.68
APOBEC3A-204ENST00000495988 CLTCL1P53675 1640 aa25.55■■□□□ 1.68
APOBEC3A-204ENST00000495988 ROBO1Q9Y6N7 1651 aa25.55■■□□□ 1.68
APOBEC3A-204ENST00000495988 PIK3R4Q99570 1358 aa25.55■■□□□ 1.68
APOBEC3A-204ENST00000495988 PHF23Q9BUL5 403 aaPredicted RBP25.52■■□□□ 1.68
APOBEC3A-204ENST00000495988 NCOA3Q9Y6Q9 1424 aa25.51■■□□□ 1.67
APOBEC3A-204ENST00000495988 KIF1BO60333 1816 aa25.5■■□□□ 1.67
APOBEC3A-204ENST00000495988 C14orf37Q86TY3 774 aa25.5■■□□□ 1.67
APOBEC3A-204ENST00000495988 NRXN3Q9Y4C0 1643 aa25.49■■□□□ 1.67
APOBEC3A-204ENST00000495988 SETBP1Q9Y6X0 1596 aa25.49■■□□□ 1.67
APOBEC3A-204ENST00000495988 SLAIN2Q9P270 581 aa25.49■■□□□ 1.67
APOBEC3A-204ENST00000495988 AMOTL2Q9Y2J4 779 aa25.49■■□□□ 1.67
APOBEC3A-204ENST00000495988 SLC4A1APQ9BWU0 796 aaKnown RBP25.48■■□□□ 1.67
APOBEC3A-204ENST00000495988 PTPRUQ92729 1446 aa25.47■■□□□ 1.67
APOBEC3A-204ENST00000495988 NEXMIFQ5QGS0 1516 aa25.47■■□□□ 1.67
APOBEC3A-204ENST00000495988 C19orf44Q9H6X5 657 aa25.43■■□□□ 1.66
APOBEC3A-204ENST00000495988 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.43■■□□□ 1.66
APOBEC3A-204ENST00000495988 XRN1Q8IZH2 1706 aaKnown RBP25.42■■□□□ 1.66
APOBEC3A-204ENST00000495988 METP08581 1390 aa25.41■■□□□ 1.66
APOBEC3A-204ENST00000495988 PHLPP1O60346 1717 aa25.4■■□□□ 1.66
APOBEC3A-204ENST00000495988 ATF3P18847 181 aa25.4■■□□□ 1.66
APOBEC3A-204ENST00000495988 CADPS2Q86UW7 1296 aa25.4■■□□□ 1.66
APOBEC3A-204ENST00000495988 VGFO15240 615 aaPredicted RBP25.35■■□□□ 1.65
APOBEC3A-204ENST00000495988 FOXD1Q16676 465 aa25.35■■□□□ 1.65
APOBEC3A-204ENST00000495988 RPGRIP1LQ68CZ1 1315 aa25.33■■□□□ 1.64
APOBEC3A-204ENST00000495988 DCCP43146 1447 aa25.32■■□□□ 1.64
APOBEC3A-204ENST00000495988 JCADQ9P266 1359 aa25.31■■□□□ 1.64
APOBEC3A-204ENST00000495988 COL16A1Q07092 1604 aaPredicted RBP25.31■■□□□ 1.64
APOBEC3A-204ENST00000495988 RGS17Q9UGC6 210 aaPredicted RBP25.3■■□□□ 1.64
APOBEC3A-204ENST00000495988 PPLO60437 1756 aa25.3■■□□□ 1.64
APOBEC3A-204ENST00000495988 MPHOSPH9Q99550 1183 aa25.29■■□□□ 1.64
APOBEC3A-204ENST00000495988 CCDC144AA2RUR9 1427 aa25.29■■□□□ 1.64
APOBEC3A-204ENST00000495988 AHDC1Q5TGY3 1603 aaPredicted RBP25.28■■□□□ 1.64
APOBEC3A-204ENST00000495988 SETD1AO15047 1707 aaKnown RBP25.28■■□□□ 1.64
APOBEC3A-204ENST00000495988 BRINP3Q76B58 766 aa25.26■■□□□ 1.63
APOBEC3A-204ENST00000495988 ADGRL3Q9HAR2 1447 aa25.26■■□□□ 1.63
APOBEC3A-204ENST00000495988 MST1RQ04912 1400 aa25.25■■□□□ 1.63
APOBEC3A-204ENST00000495988 NALCNQ8IZF0 1738 aa25.24■■□□□ 1.63
APOBEC3A-204ENST00000495988 PTCH1Q13635 1447 aa25.22■■□□□ 1.63
APOBEC3A-204ENST00000495988 SETD5Q9C0A6 1442 aa25.22■■□□□ 1.63
APOBEC3A-204ENST00000495988 ASXL1Q8IXJ9 1541 aa25.22■■□□□ 1.63
APOBEC3A-204ENST00000495988 ACIN1Q9UKV3 1341 aaKnown RBP25.21■■□□□ 1.63
APOBEC3A-204ENST00000495988 RGL3Q3MIN7 710 aa25.21■■□□□ 1.63
APOBEC3A-204ENST00000495988 SPATA31E1Q6ZUB1 1445 aa25.2■■□□□ 1.62
APOBEC3A-204ENST00000495988 ROBO2Q9HCK4 1378 aa25.19■■□□□ 1.62
APOBEC3A-204ENST00000495988 SPATA31A6Q5VVP1 1343 aa25.18■■□□□ 1.62
APOBEC3A-204ENST00000495988 SHPRHQ149N8 1683 aa25.18■■□□□ 1.62
APOBEC3A-204ENST00000495988 ADGRF5Q8IZF2 1346 aa25.17■■□□□ 1.62
APOBEC3A-204ENST00000495988 POTEAQ6S8J7 498 aa25.17■■□□□ 1.62
APOBEC3A-204ENST00000495988 PRAG1Q86YV5 1406 aa25.17■■□□□ 1.62
APOBEC3A-204ENST00000495988 IFT172Q9UG01 1749 aa25.16■■□□□ 1.62
APOBEC3A-204ENST00000495988 NHSL1Q5SYE7 1610 aa25.15■■□□□ 1.62
APOBEC3A-204ENST00000495988 ANKRD30BQ9BXX2 1392 aa25.15■■□□□ 1.62
APOBEC3A-204ENST00000495988 LRP6O75581 1613 aa25.15■■□□□ 1.62
APOBEC3A-204ENST00000495988 MEX3CQ5U5Q3 659 aaKnown RBP25.12■■□□□ 1.61
APOBEC3A-204ENST00000495988 RAB3GAP2Q9H2M9 1393 aa25.12■■□□□ 1.61
APOBEC3A-204ENST00000495988 C1orf167Q5SNV9 1468 aa25.11■■□□□ 1.61
APOBEC3A-204ENST00000495988 DDX17Q92841 729 aaKnown RBP25.09■■□□□ 1.61
APOBEC3A-204ENST00000495988 LRRC59Q96AG4 307 aaKnown RBP25.08■■□□□ 1.61
APOBEC3A-204ENST00000495988 PIK3C2GO75747 1445 aa25.07■■□□□ 1.6
APOBEC3A-204ENST00000495988 NUTM2BA6NNL0 878 aaPredicted RBP25.07■■□□□ 1.6
APOBEC3A-204ENST00000495988 NUTM2EB1AL46 878 aaPredicted RBP25.07■■□□□ 1.6
APOBEC3A-204ENST00000495988 NUTM2AQ8IVF1 878 aaPredicted RBP25.07■■□□□ 1.6
APOBEC3A-204ENST00000495988 STK26Q9P289 416 aa25.06■■□□□ 1.6
APOBEC3A-204ENST00000495988 TMEM132EQ6IEE7 984 aa25.04■■□□□ 1.6
APOBEC3A-204ENST00000495988 ORAI2Q96SN7 254 aa25.04■■□□□ 1.6
APOBEC3A-204ENST00000495988 LRPPRCP42704 1394 aaKnown RBP25.04■■□□□ 1.6
APOBEC3A-204ENST00000495988 TECPR2O15040 1411 aa25.03■■□□□ 1.6
APOBEC3A-204ENST00000495988 CDC42BPGQ6DT37 1551 aa25.02■■□□□ 1.6
APOBEC3A-204ENST00000495988 ZNF772Q68DY9 489 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms