RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 SETD1AO15047 1707 aaKnown RBP21.19■□□□□ 0.98
COL1A1-209ENST00000495677 NCOA3Q9Y6Q9 1424 aa21.19■□□□□ 0.98
COL1A1-209ENST00000495677 RBM33Q96EV2 1170 aaKnown RBP21.18■□□□□ 0.98
COL1A1-209ENST00000495677 ANKRD30AQ9BXX3 1397 aa21.18■□□□□ 0.98
COL1A1-209ENST00000495677 COL16A1Q07092 1604 aaPredicted RBP21.17■□□□□ 0.98
COL1A1-209ENST00000495677 RPRD2Q5VT52 1461 aaKnown RBP21.16■□□□□ 0.98
COL1A1-209ENST00000495677 ZFYVE9O95405 1425 aa21.15■□□□□ 0.98
COL1A1-209ENST00000495677 HDGFP51858 240 aaKnown RBP21.15■□□□□ 0.98
COL1A1-209ENST00000495677 FGD6Q6ZV73 1430 aa21.14■□□□□ 0.98
COL1A1-209ENST00000495677 PLEKHG1Q9ULL1 1385 aa21.14■□□□□ 0.98
COL1A1-209ENST00000495677 TBX22Q9Y458 520 aa21.13■□□□□ 0.97
COL1A1-209ENST00000495677 GCC2Q8IWJ2 1684 aa21.12■□□□□ 0.97
COL1A1-209ENST00000495677 SPATA31A6Q5VVP1 1343 aa21.12■□□□□ 0.97
COL1A1-209ENST00000495677 TMEM131LA2VDJ0 1609 aa21.11■□□□□ 0.97
COL1A1-209ENST00000495677 SHPRHQ149N8 1683 aa21.11■□□□□ 0.97
COL1A1-209ENST00000495677 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.1■□□□□ 0.97
COL1A1-209ENST00000495677 ADGRL2O95490 1459 aa21.1■□□□□ 0.97
COL1A1-209ENST00000495677 BCANQ96GW7 911 aa21.1■□□□□ 0.97
COL1A1-209ENST00000495677 ZNF772Q68DY9 489 aaPredicted RBP21.09■□□□□ 0.97
COL1A1-209ENST00000495677 CHIC2Q9UKJ5 165 aa21.09■□□□□ 0.97
COL1A1-209ENST00000495677 AHDC1Q5TGY3 1603 aaPredicted RBP21.08■□□□□ 0.97
COL1A1-209ENST00000495677 LOC105371045A0A1W2PR82 267 aa21.08■□□□□ 0.97
COL1A1-209ENST00000495677 RIMS2Q9UQ26 1411 aa21.07■□□□□ 0.96
COL1A1-209ENST00000495677 UPF1Q92900 1129 aaKnown RBP eCLIP21.06■□□□□ 0.96
COL1A1-209ENST00000495677 LRP6O75581 1613 aa21.06■□□□□ 0.96
COL1A1-209ENST00000495677 PIK3R4Q99570 1358 aa21.06■□□□□ 0.96
COL1A1-209ENST00000495677 APLP2Q06481 763 aa21.05■□□□□ 0.96
COL1A1-209ENST00000495677 CADPS2Q86UW7 1296 aa21.05■□□□□ 0.96
COL1A1-209ENST00000495677 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.05■□□□□ 0.96
COL1A1-209ENST00000495677 C19orf44Q9H6X5 657 aa21.05■□□□□ 0.96
COL1A1-209ENST00000495677 DIP2AQ14689 1571 aa21.05■□□□□ 0.96
COL1A1-209ENST00000495677 PPP1R15AO75807 674 aaPredicted RBP21.02■□□□□ 0.96
COL1A1-209ENST00000495677 ADAMTS13Q76LX8 1427 aa21.02■□□□□ 0.96
COL1A1-209ENST00000495677 ANKRD50Q9ULJ7 1429 aa21.02■□□□□ 0.96
COL1A1-209ENST00000495677 CDK12Q9NYV4 1490 aaPredicted RBP21■□□□□ 0.95
COL1A1-209ENST00000495677 MEX3CQ5U5Q3 659 aaKnown RBP20.99■□□□□ 0.95
COL1A1-209ENST00000495677 ATF3P18847 181 aa20.98■□□□□ 0.95
COL1A1-209ENST00000495677 E9PCH4 1651 aa20.98■□□□□ 0.95
COL1A1-209ENST00000495677 RXRBP28702 533 aa20.97■□□□□ 0.95
COL1A1-209ENST00000495677 UNC13BO14795 1591 aa20.97■□□□□ 0.95
COL1A1-209ENST00000495677 C14orf37Q86TY3 774 aa20.96■□□□□ 0.95
COL1A1-209ENST00000495677 DCCP43146 1447 aa20.95■□□□□ 0.94
COL1A1-209ENST00000495677 TRPM2O94759 1503 aa20.94■□□□□ 0.94
COL1A1-209ENST00000495677 BRINP3Q76B58 766 aa20.94■□□□□ 0.94
COL1A1-209ENST00000495677 TRIM52Q96A61 297 aa20.94■□□□□ 0.94
COL1A1-209ENST00000495677 NHSL1Q5SYE7 1610 aa20.93■□□□□ 0.94
COL1A1-209ENST00000495677 AMOTL2Q9Y2J4 779 aa20.92■□□□□ 0.94
COL1A1-209ENST00000495677 SETD5Q9C0A6 1442 aa20.92■□□□□ 0.94
COL1A1-209ENST00000495677 IQGAP3Q86VI3 1631 aa20.9■□□□□ 0.94
COL1A1-209ENST00000495677 PTPRUQ92729 1446 aa20.9■□□□□ 0.94
COL1A1-209ENST00000495677 CHGAP10645 457 aaKnown RBP20.9■□□□□ 0.94
COL1A1-209ENST00000495677 XRN1Q8IZH2 1706 aaKnown RBP20.89■□□□□ 0.93
COL1A1-209ENST00000495677 NRXN3Q9Y4C0 1643 aa20.87■□□□□ 0.93
COL1A1-209ENST00000495677 NUTM2DQ5VT03 806 aaPredicted RBP20.87■□□□□ 0.93
COL1A1-209ENST00000495677 LRRC59Q96AG4 307 aaKnown RBP20.87■□□□□ 0.93
COL1A1-209ENST00000495677 ASXL1Q8IXJ9 1541 aa20.87■□□□□ 0.93
COL1A1-209ENST00000495677 AFF2P51816 1311 aa20.85■□□□□ 0.93
COL1A1-209ENST00000495677 FAM50AQ14320 339 aaKnown RBP20.85■□□□□ 0.93
COL1A1-209ENST00000495677 MST1RQ04912 1400 aa20.85■□□□□ 0.93
COL1A1-209ENST00000495677 SETBP1Q9Y6X0 1596 aa20.85■□□□□ 0.93
COL1A1-209ENST00000495677 NUTM2BA6NNL0 878 aaPredicted RBP20.84■□□□□ 0.93
COL1A1-209ENST00000495677 NUTM2EB1AL46 878 aaPredicted RBP20.84■□□□□ 0.93
COL1A1-209ENST00000495677 NUTM2AQ8IVF1 878 aaPredicted RBP20.84■□□□□ 0.93
COL1A1-209ENST00000495677 ROCK1Q13464 1354 aa20.83■□□□□ 0.92
COL1A1-209ENST00000495677 RBM6P78332 1123 aaKnown RBP20.82■□□□□ 0.92
COL1A1-209ENST00000495677 QTRT2Q9H974 415 aaKnown RBP20.8■□□□□ 0.92
COL1A1-209ENST00000495677 LAMC1P11047 1609 aa20.79■□□□□ 0.92
COL1A1-209ENST00000495677 SPHKAPQ2M3C7 1700 aa20.79■□□□□ 0.92
COL1A1-209ENST00000495677 RGS12O14924 1447 aa20.78■□□□□ 0.92
COL1A1-209ENST00000495677 PNPLA6Q8IY17 1366 aa20.77■□□□□ 0.92
COL1A1-209ENST00000495677 NALCNQ8IZF0 1738 aa20.76■□□□□ 0.91
COL1A1-209ENST00000495677 ADGRL3Q9HAR2 1447 aa20.76■□□□□ 0.91
COL1A1-209ENST00000495677 NUP155O75694 1391 aa20.75■□□□□ 0.91
COL1A1-209ENST00000495677 C8orf37Q96NL8 207 aa20.75■□□□□ 0.91
COL1A1-209ENST00000495677 METP08581 1390 aa20.74■□□□□ 0.91
COL1A1-209ENST00000495677 NGLY1Q96IV0 654 aa20.73■□□□□ 0.91
COL1A1-209ENST00000495677 KIF1BO60333 1816 aa20.71■□□□□ 0.91
COL1A1-209ENST00000495677 DDX17Q92841 729 aaKnown RBP20.69■□□□□ 0.9
COL1A1-209ENST00000495677 SOS2Q07890 1332 aaPredicted RBP20.69■□□□□ 0.9
COL1A1-209ENST00000495677 C1orf167Q5SNV9 1468 aa20.69■□□□□ 0.9
COL1A1-209ENST00000495677 NEXMIFQ5QGS0 1516 aa20.68■□□□□ 0.9
COL1A1-209ENST00000495677 ZNF326Q5BKZ1 582 aaKnown RBP20.67■□□□□ 0.9
COL1A1-209ENST00000495677 FNBP4Q8N3X1 1017 aaPredicted RBP20.67■□□□□ 0.9
COL1A1-209ENST00000495677 ATAD2Q6PL18 1390 aa20.67■□□□□ 0.9
COL1A1-209ENST00000495677 FOXD1Q16676 465 aa20.66■□□□□ 0.9
COL1A1-209ENST00000495677 PTCH1Q13635 1447 aa20.66■□□□□ 0.9
COL1A1-209ENST00000495677 COL22A1Q8NFW1 1626 aaPredicted RBP20.66■□□□□ 0.9
COL1A1-209ENST00000495677 MARF1Q9Y4F3 1742 aaKnown RBP20.65■□□□□ 0.9
COL1A1-209ENST00000495677 TRPC5Q9UL62 973 aaPredicted RBP20.65■□□□□ 0.9
COL1A1-209ENST00000495677 SRCAPQ6ZRS2 3230 aa20.65■□□□□ 0.9
COL1A1-209ENST00000495677 USP21Q9UK80 565 aa20.64■□□□□ 0.89
COL1A1-209ENST00000495677 PRAG1Q86YV5 1406 aa20.63■□□□□ 0.89
COL1A1-209ENST00000495677 ADAMTS2O95450 1211 aa20.63■□□□□ 0.89
COL1A1-209ENST00000495677 CLTCL1P53675 1640 aa20.63■□□□□ 0.89
COL1A1-209ENST00000495677 CCDC125Q86Z20 511 aa20.62■□□□□ 0.89
COL1A1-209ENST00000495677 ATRNO75882 1429 aa20.61■□□□□ 0.89
COL1A1-209ENST00000495677 ORAI2Q96SN7 254 aa20.6■□□□□ 0.89
COL1A1-209ENST00000495677 EP400Q96L91 3159 aa20.58■□□□□ 0.89
COL1A1-209ENST00000495677 VGFO15240 615 aaPredicted RBP20.58■□□□□ 0.89
COL1A1-209ENST00000495677 ZRANB1Q9UGI0 708 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms