RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 RIMS2Q9UQ26 1411 aa22.18■■□□□ 1.14
RAPGEF3-214ENST00000495465 KCNA6P17658 529 aa22.18■■□□□ 1.14
RAPGEF3-214ENST00000495465 NUTM2DQ5VT03 806 aaPredicted RBP22.17■■□□□ 1.14
RAPGEF3-214ENST00000495465 E9PCH4 1651 aa22.17■■□□□ 1.14
RAPGEF3-214ENST00000495465 ZFYVE9O95405 1425 aa22.15■■□□□ 1.14
RAPGEF3-214ENST00000495465 PROSER2Q86WR7 435 aaPredicted RBP22.15■■□□□ 1.14
RAPGEF3-214ENST00000495465 RBM33Q96EV2 1170 aaKnown RBP22.15■■□□□ 1.14
RAPGEF3-214ENST00000495465 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.14■■□□□ 1.13
RAPGEF3-214ENST00000495465 ALKQ9UM73 1620 aa22.13■■□□□ 1.13
RAPGEF3-214ENST00000495465 ILDR2Q71H61 639 aa22.13■■□□□ 1.13
RAPGEF3-214ENST00000495465 NAIPQ13075 1403 aa22.13■■□□□ 1.13
RAPGEF3-214ENST00000495465 TMEM131LA2VDJ0 1609 aa22.13■■□□□ 1.13
RAPGEF3-214ENST00000495465 PLEKHG1Q9ULL1 1385 aa22.12■■□□□ 1.13
RAPGEF3-214ENST00000495465 TMEM94Q12767 1356 aa22.12■■□□□ 1.13
RAPGEF3-214ENST00000495465 TRIM52Q96A61 297 aa22.1■■□□□ 1.13
RAPGEF3-214ENST00000495465 MYO5BQ9ULV0 1848 aa22.09■■□□□ 1.13
RAPGEF3-214ENST00000495465 TBX22Q9Y458 520 aa22.07■■□□□ 1.12
RAPGEF3-214ENST00000495465 ZNF326Q5BKZ1 582 aaKnown RBP22.06■■□□□ 1.12
RAPGEF3-214ENST00000495465 HFM1A2PYH4 1435 aa22.03■■□□□ 1.12
RAPGEF3-214ENST00000495465 XIRP1Q702N8 1843 aaKnown RBP22.01■■□□□ 1.11
RAPGEF3-214ENST00000495465 ADAMTS13Q76LX8 1427 aa22.01■■□□□ 1.11
RAPGEF3-214ENST00000495465 NKTRP30414 1462 aaKnown RBP22.01■■□□□ 1.11
RAPGEF3-214ENST00000495465 SLC4A1APQ9BWU0 796 aaKnown RBP22■■□□□ 1.11
RAPGEF3-214ENST00000495465 NWD1Q149M9 1564 aa21.99■■□□□ 1.11
RAPGEF3-214ENST00000495465 MSH6P52701 1360 aa21.99■■□□□ 1.11
RAPGEF3-214ENST00000495465 SPHKAPQ2M3C7 1700 aa21.97■■□□□ 1.11
RAPGEF3-214ENST00000495465 C14orf37Q86TY3 774 aa21.97■■□□□ 1.11
RAPGEF3-214ENST00000495465 FAM135BQ49AJ0 1406 aa21.97■■□□□ 1.11
RAPGEF3-214ENST00000495465 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
RAPGEF3-214ENST00000495465 SLAIN2Q9P270 581 aa21.94■■□□□ 1.1
RAPGEF3-214ENST00000495465 PIK3R4Q99570 1358 aa21.94■■□□□ 1.1
RAPGEF3-214ENST00000495465 CHD2O14647 1828 aaKnown RBP21.93■■□□□ 1.1
RAPGEF3-214ENST00000495465 MED1Q15648 1581 aaPredicted RBP21.93■■□□□ 1.1
RAPGEF3-214ENST00000495465 TRPM2O94759 1503 aa21.92■■□□□ 1.1
RAPGEF3-214ENST00000495465 SOCS7O14512 581 aa21.92■■□□□ 1.1
RAPGEF3-214ENST00000495465 FOXD1Q16676 465 aa21.92■■□□□ 1.1
RAPGEF3-214ENST00000495465 CLTCL1P53675 1640 aa21.91■■□□□ 1.1
RAPGEF3-214ENST00000495465 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
RAPGEF3-214ENST00000495465 PHF23Q9BUL5 403 aaPredicted RBP21.91■■□□□ 1.1
RAPGEF3-214ENST00000495465 PTPRUQ92729 1446 aa21.9■■□□□ 1.1
RAPGEF3-214ENST00000495465 C19orf44Q9H6X5 657 aa21.88■■□□□ 1.09
RAPGEF3-214ENST00000495465 NCOA3Q9Y6Q9 1424 aa21.88■■□□□ 1.09
RAPGEF3-214ENST00000495465 METP08581 1390 aa21.87■■□□□ 1.09
RAPGEF3-214ENST00000495465 ATF3P18847 181 aa21.87■■□□□ 1.09
RAPGEF3-214ENST00000495465 VGFO15240 615 aaPredicted RBP21.85■■□□□ 1.09
RAPGEF3-214ENST00000495465 CADPS2Q86UW7 1296 aa21.85■■□□□ 1.09
RAPGEF3-214ENST00000495465 MPHOSPH9Q99550 1183 aa21.85■■□□□ 1.09
RAPGEF3-214ENST00000495465 SETBP1Q9Y6X0 1596 aa21.85■■□□□ 1.09
RAPGEF3-214ENST00000495465 ROBO1Q9Y6N7 1651 aa21.85■■□□□ 1.09
RAPGEF3-214ENST00000495465 NEXMIFQ5QGS0 1516 aa21.84■■□□□ 1.09
RAPGEF3-214ENST00000495465 NRXN3Q9Y4C0 1643 aa21.83■■□□□ 1.08
RAPGEF3-214ENST00000495465 RPGRIP1LQ68CZ1 1315 aa21.81■■□□□ 1.08
RAPGEF3-214ENST00000495465 KIF1BO60333 1816 aa21.8■■□□□ 1.08
RAPGEF3-214ENST00000495465 RGL3Q3MIN7 710 aa21.79■■□□□ 1.08
RAPGEF3-214ENST00000495465 SETD5Q9C0A6 1442 aa21.77■■□□□ 1.08
RAPGEF3-214ENST00000495465 CCDC144AA2RUR9 1427 aa21.76■■□□□ 1.07
RAPGEF3-214ENST00000495465 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.76■■□□□ 1.07
RAPGEF3-214ENST00000495465 XRN1Q8IZH2 1706 aaKnown RBP21.75■■□□□ 1.07
RAPGEF3-214ENST00000495465 RGS17Q9UGC6 210 aaPredicted RBP21.74■■□□□ 1.07
RAPGEF3-214ENST00000495465 BRINP3Q76B58 766 aa21.73■■□□□ 1.07
RAPGEF3-214ENST00000495465 JCADQ9P266 1359 aa21.72■■□□□ 1.07
RAPGEF3-214ENST00000495465 ADGRF5Q8IZF2 1346 aa21.71■■□□□ 1.07
RAPGEF3-214ENST00000495465 ACIN1Q9UKV3 1341 aaKnown RBP21.71■■□□□ 1.07
RAPGEF3-214ENST00000495465 PHLPP1O60346 1717 aa21.71■■□□□ 1.07
RAPGEF3-214ENST00000495465 DCCP43146 1447 aa21.71■■□□□ 1.07
RAPGEF3-214ENST00000495465 RAB3GAP2Q9H2M9 1393 aa21.69■■□□□ 1.06
RAPGEF3-214ENST00000495465 ROBO2Q9HCK4 1378 aa21.69■■□□□ 1.06
RAPGEF3-214ENST00000495465 SPATA31E1Q6ZUB1 1445 aa21.68■■□□□ 1.06
RAPGEF3-214ENST00000495465 ADGRL3Q9HAR2 1447 aa21.68■■□□□ 1.06
RAPGEF3-214ENST00000495465 MST1RQ04912 1400 aa21.67■■□□□ 1.06
RAPGEF3-214ENST00000495465 STK26Q9P289 416 aa21.65■■□□□ 1.06
RAPGEF3-214ENST00000495465 COL16A1Q07092 1604 aaPredicted RBP21.65■■□□□ 1.06
RAPGEF3-214ENST00000495465 PTCH1Q13635 1447 aa21.64■■□□□ 1.06
RAPGEF3-214ENST00000495465 PPLO60437 1756 aa21.64■■□□□ 1.06
RAPGEF3-214ENST00000495465 ANKRD30BQ9BXX2 1392 aa21.64■■□□□ 1.06
RAPGEF3-214ENST00000495465 POTEAQ6S8J7 498 aa21.63■■□□□ 1.05
RAPGEF3-214ENST00000495465 DDX17Q92841 729 aaKnown RBP21.63■■□□□ 1.05
RAPGEF3-214ENST00000495465 AHDC1Q5TGY3 1603 aaPredicted RBP21.62■■□□□ 1.05
RAPGEF3-214ENST00000495465 TMEM132EQ6IEE7 984 aa21.62■■□□□ 1.05
RAPGEF3-214ENST00000495465 SPATA31A6Q5VVP1 1343 aa21.61■■□□□ 1.05
RAPGEF3-214ENST00000495465 ASXL1Q8IXJ9 1541 aa21.61■■□□□ 1.05
RAPGEF3-214ENST00000495465 SETD1AO15047 1707 aaKnown RBP21.61■■□□□ 1.05
RAPGEF3-214ENST00000495465 MEX3CQ5U5Q3 659 aaKnown RBP21.6■■□□□ 1.05
RAPGEF3-214ENST00000495465 NUTM2BA6NNL0 878 aaPredicted RBP21.59■■□□□ 1.05
RAPGEF3-214ENST00000495465 NUTM2EB1AL46 878 aaPredicted RBP21.59■■□□□ 1.05
RAPGEF3-214ENST00000495465 NUTM2AQ8IVF1 878 aaPredicted RBP21.59■■□□□ 1.05
RAPGEF3-214ENST00000495465 NALCNQ8IZF0 1738 aa21.58■■□□□ 1.05
RAPGEF3-214ENST00000495465 WAPLQ7Z5K2 1190 aa21.58■■□□□ 1.05
RAPGEF3-214ENST00000495465 C1orf167Q5SNV9 1468 aa21.58■■□□□ 1.04
RAPGEF3-214ENST00000495465 PRAG1Q86YV5 1406 aa21.57■■□□□ 1.04
RAPGEF3-214ENST00000495465 LRRC59Q96AG4 307 aaKnown RBP21.57■■□□□ 1.04
RAPGEF3-214ENST00000495465 ORAI2Q96SN7 254 aa21.57■■□□□ 1.04
RAPGEF3-214ENST00000495465 PIK3C2GO75747 1445 aa21.55■■□□□ 1.04
RAPGEF3-214ENST00000495465 LRP6O75581 1613 aa21.55■■□□□ 1.04
RAPGEF3-214ENST00000495465 LRPPRCP42704 1394 aaKnown RBP21.55■■□□□ 1.04
RAPGEF3-214ENST00000495465 CFAP70Q5T0N1 1121 aa21.53■■□□□ 1.04
RAPGEF3-214ENST00000495465 C14orf93Q9H972 538 aaKnown RBP21.53■■□□□ 1.04
RAPGEF3-214ENST00000495465 ABCC11Q96J66 1382 aa21.52■■□□□ 1.04
RAPGEF3-214ENST00000495465 HRCP23327 699 aa21.52■■□□□ 1.04
RAPGEF3-214ENST00000495465 NUTM2FA1L443 756 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms