RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 RPRD2Q5VT52 1461 aaKnown RBP23.41■■□□□ 1.34
NUP58-214ENST00000495460 FAM135BQ49AJ0 1406 aa23.41■■□□□ 1.34
NUP58-214ENST00000495460 KCNA6P17658 529 aa23.4■■□□□ 1.34
NUP58-214ENST00000495460 TET3O43151 1660 aa23.4■■□□□ 1.34
NUP58-214ENST00000495460 NCBP3Q53F19 620 aaKnown RBP23.39■■□□□ 1.33
NUP58-214ENST00000495460 XIRP1Q702N8 1843 aaKnown RBP23.38■■□□□ 1.33
NUP58-214ENST00000495460 CHIC2Q9UKJ5 165 aa23.35■■□□□ 1.33
NUP58-214ENST00000495460 HDGFP51858 240 aaKnown RBP23.34■■□□□ 1.33
NUP58-214ENST00000495460 ADGRB3O60242 1522 aa23.32■■□□□ 1.32
NUP58-214ENST00000495460 ANKRD50Q9ULJ7 1429 aa23.32■■□□□ 1.32
NUP58-214ENST00000495460 NKTRP30414 1462 aaKnown RBP23.3■■□□□ 1.32
NUP58-214ENST00000495460 TMEM94Q12767 1356 aa23.3■■□□□ 1.32
NUP58-214ENST00000495460 NWD1Q149M9 1564 aa23.27■■□□□ 1.32
NUP58-214ENST00000495460 PROSER2Q86WR7 435 aaPredicted RBP23.27■■□□□ 1.32
NUP58-214ENST00000495460 ZFYVE9O95405 1425 aa23.26■■□□□ 1.31
NUP58-214ENST00000495460 NCOA3Q9Y6Q9 1424 aa23.26■■□□□ 1.31
NUP58-214ENST00000495460 SLC26A8Q96RN1 970 aa23.26■■□□□ 1.31
NUP58-214ENST00000495460 PLEKHG1Q9ULL1 1385 aa23.26■■□□□ 1.31
NUP58-214ENST00000495460 NPM3O75607 178 aaKnown RBP23.25■■□□□ 1.31
NUP58-214ENST00000495460 TBX22Q9Y458 520 aa23.24■■□□□ 1.31
NUP58-214ENST00000495460 ROCK1Q13464 1354 aa23.24■■□□□ 1.31
NUP58-214ENST00000495460 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.23■■□□□ 1.31
NUP58-214ENST00000495460 FAM50AQ14320 339 aaKnown RBP23.22■■□□□ 1.31
NUP58-214ENST00000495460 RGS17Q9UGC6 210 aaPredicted RBP23.21■■□□□ 1.31
NUP58-214ENST00000495460 GCC2Q8IWJ2 1684 aa23.2■■□□□ 1.3
NUP58-214ENST00000495460 TMEM131LA2VDJ0 1609 aa23.2■■□□□ 1.3
NUP58-214ENST00000495460 CHD2O14647 1828 aaKnown RBP23.19■■□□□ 1.3
NUP58-214ENST00000495460 MSH6P52701 1360 aa23.19■■□□□ 1.3
NUP58-214ENST00000495460 SLAIN2Q9P270 581 aa23.19■■□□□ 1.3
NUP58-214ENST00000495460 UNC13BO14795 1591 aa23.18■■□□□ 1.3
NUP58-214ENST00000495460 PIK3R4Q99570 1358 aa23.18■■□□□ 1.3
NUP58-214ENST00000495460 RIMS2Q9UQ26 1411 aa23.17■■□□□ 1.3
NUP58-214ENST00000495460 ROBO1Q9Y6N7 1651 aa23.17■■□□□ 1.3
NUP58-214ENST00000495460 BCANQ96GW7 911 aa23.13■■□□□ 1.29
NUP58-214ENST00000495460 PPP1R15AO75807 674 aaPredicted RBP23.12■■□□□ 1.29
NUP58-214ENST00000495460 DIP2AQ14689 1571 aa23.12■■□□□ 1.29
NUP58-214ENST00000495460 MYO5BQ9ULV0 1848 aa23.11■■□□□ 1.29
NUP58-214ENST00000495460 IQGAP3Q86VI3 1631 aa23.11■■□□□ 1.29
NUP58-214ENST00000495460 C19orf44Q9H6X5 657 aa23.09■■□□□ 1.29
NUP58-214ENST00000495460 E9PCH4 1651 aa23.09■■□□□ 1.29
NUP58-214ENST00000495460 ADAMTS13Q76LX8 1427 aa23.08■■□□□ 1.29
NUP58-214ENST00000495460 JCADQ9P266 1359 aa23.08■■□□□ 1.29
NUP58-214ENST00000495460 CADPS2Q86UW7 1296 aa23.07■■□□□ 1.28
NUP58-214ENST00000495460 RBM33Q96EV2 1170 aaKnown RBP23.07■■□□□ 1.28
NUP58-214ENST00000495460 NUP155O75694 1391 aa23.04■■□□□ 1.28
NUP58-214ENST00000495460 POTEAQ6S8J7 498 aa23.03■■□□□ 1.28
NUP58-214ENST00000495460 PHLPP1O60346 1717 aa23.02■■□□□ 1.28
NUP58-214ENST00000495460 SPATA31A6Q5VVP1 1343 aa23.02■■□□□ 1.28
NUP58-214ENST00000495460 TRPM2O94759 1503 aa23■■□□□ 1.27
NUP58-214ENST00000495460 DCCP43146 1447 aa22.99■■□□□ 1.27
NUP58-214ENST00000495460 CHGAP10645 457 aaKnown RBP22.99■■□□□ 1.27
NUP58-214ENST00000495460 ATF3P18847 181 aa22.99■■□□□ 1.27
NUP58-214ENST00000495460 COL16A1Q07092 1604 aaPredicted RBP22.98■■□□□ 1.27
NUP58-214ENST00000495460 AHDC1Q5TGY3 1603 aaPredicted RBP22.97■■□□□ 1.27
NUP58-214ENST00000495460 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.97■■□□□ 1.27
NUP58-214ENST00000495460 AMOTL2Q9Y2J4 779 aa22.97■■□□□ 1.27
NUP58-214ENST00000495460 SETBP1Q9Y6X0 1596 aa22.95■■□□□ 1.26
NUP58-214ENST00000495460 C14orf37Q86TY3 774 aa22.94■■□□□ 1.26
NUP58-214ENST00000495460 PTPRUQ92729 1446 aa22.92■■□□□ 1.26
NUP58-214ENST00000495460 ZNF772Q68DY9 489 aaPredicted RBP22.91■■□□□ 1.26
NUP58-214ENST00000495460 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
NUP58-214ENST00000495460 SHPRHQ149N8 1683 aa22.9■■□□□ 1.26
NUP58-214ENST00000495460 SPHKAPQ2M3C7 1700 aa22.89■■□□□ 1.26
NUP58-214ENST00000495460 BRINP3Q76B58 766 aa22.89■■□□□ 1.25
NUP58-214ENST00000495460 XRN1Q8IZH2 1706 aaKnown RBP22.88■■□□□ 1.25
NUP58-214ENST00000495460 NRXN3Q9Y4C0 1643 aa22.88■■□□□ 1.25
NUP58-214ENST00000495460 SETD5Q9C0A6 1442 aa22.85■■□□□ 1.25
NUP58-214ENST00000495460 LRP6O75581 1613 aa22.83■■□□□ 1.25
NUP58-214ENST00000495460 METP08581 1390 aa22.82■■□□□ 1.24
NUP58-214ENST00000495460 ITGAEP38570 1179 aa22.82■■□□□ 1.24
NUP58-214ENST00000495460 LRRC59Q96AG4 307 aaKnown RBP22.82■■□□□ 1.24
NUP58-214ENST00000495460 MST1RQ04912 1400 aa22.82■■□□□ 1.24
NUP58-214ENST00000495460 RRBP1Q9P2E9 1410 aaKnown RBP22.82■■□□□ 1.24
NUP58-214ENST00000495460 ZNF326Q5BKZ1 582 aaKnown RBP22.81■■□□□ 1.24
NUP58-214ENST00000495460 NEXMIFQ5QGS0 1516 aa22.8■■□□□ 1.24
NUP58-214ENST00000495460 PRAG1Q86YV5 1406 aa22.8■■□□□ 1.24
NUP58-214ENST00000495460 ASXL1Q8IXJ9 1541 aa22.79■■□□□ 1.24
NUP58-214ENST00000495460 VGFO15240 615 aaPredicted RBP22.79■■□□□ 1.24
NUP58-214ENST00000495460 MEX3CQ5U5Q3 659 aaKnown RBP22.79■■□□□ 1.24
NUP58-214ENST00000495460 ADGRL3Q9HAR2 1447 aa22.79■■□□□ 1.24
NUP58-214ENST00000495460 RPGRIP1LQ68CZ1 1315 aa22.79■■□□□ 1.24
NUP58-214ENST00000495460 CDK12Q9NYV4 1490 aaPredicted RBP22.79■■□□□ 1.24
NUP58-214ENST00000495460 NAIPQ13075 1403 aa22.78■■□□□ 1.24
NUP58-214ENST00000495460 NHSL1Q5SYE7 1610 aa22.78■■□□□ 1.24
NUP58-214ENST00000495460 KIF1BO60333 1816 aa22.75■■□□□ 1.23
NUP58-214ENST00000495460 CLTCL1P53675 1640 aa22.75■■□□□ 1.23
NUP58-214ENST00000495460 RXRBP28702 533 aa22.75■■□□□ 1.23
NUP58-214ENST00000495460 U3KPZ7 1027 aaPredicted RBP22.75■■□□□ 1.23
NUP58-214ENST00000495460 PTCH1Q13635 1447 aa22.74■■□□□ 1.23
NUP58-214ENST00000495460 LAMC1P11047 1609 aa22.73■■□□□ 1.23
NUP58-214ENST00000495460 HFM1A2PYH4 1435 aa22.71■■□□□ 1.23
NUP58-214ENST00000495460 UPF1Q92900 1129 aaKnown RBP eCLIP22.7■■□□□ 1.22
NUP58-214ENST00000495460 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
NUP58-214ENST00000495460 PNPLA6Q8IY17 1366 aa22.67■■□□□ 1.22
NUP58-214ENST00000495460 SETD1AO15047 1707 aaKnown RBP22.67■■□□□ 1.22
NUP58-214ENST00000495460 NALCNQ8IZF0 1738 aa22.67■■□□□ 1.22
NUP58-214ENST00000495460 AFF2P51816 1311 aa22.66■■□□□ 1.22
NUP58-214ENST00000495460 SOS2Q07890 1332 aaPredicted RBP22.66■■□□□ 1.22
NUP58-214ENST00000495460 NUTM2BA6NNL0 878 aaPredicted RBP22.64■■□□□ 1.21
NUP58-214ENST00000495460 NUTM2EB1AL46 878 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms