RNA–Protein interactions for RNA: ENST00000495311.1

POLR2B-210, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-210ENST00000495311 TOM1O60784 492 aa16.52■□□□□ 0.24
POLR2B-210ENST00000495311 KDM5AP29375 1690 aaKnown RBP16.52■□□□□ 0.23
POLR2B-210ENST00000495311 ANKRD30BQ9BXX2 1392 aa16.51■□□□□ 0.23
POLR2B-210ENST00000495311 SCAF11Q99590 1463 aaKnown RBP16.51■□□□□ 0.23
POLR2B-210ENST00000495311 IDI1Q13907 227 aa16.51■□□□□ 0.23
POLR2B-210ENST00000495311 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
POLR2B-210ENST00000495311 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
POLR2B-210ENST00000495311 FOXD1Q16676 465 aa16.49■□□□□ 0.23
POLR2B-210ENST00000495311 MYO5BQ9ULV0 1848 aa16.48■□□□□ 0.23
POLR2B-210ENST00000495311 LTKP29376 864 aa16.48■□□□□ 0.23
POLR2B-210ENST00000495311 TRPM2O94759 1503 aa16.47■□□□□ 0.23
POLR2B-210ENST00000495311 RGS17Q9UGC6 210 aaPredicted RBP16.44■□□□□ 0.22
POLR2B-210ENST00000495311 CLSPNQ9HAW4 1339 aa16.44■□□□□ 0.22
POLR2B-210ENST00000495311 NWD1Q149M9 1564 aa16.43■□□□□ 0.22
POLR2B-210ENST00000495311 SPHKAPQ2M3C7 1700 aa16.42■□□□□ 0.22
POLR2B-210ENST00000495311 ROBO1Q9Y6N7 1651 aa16.42■□□□□ 0.22
POLR2B-210ENST00000495311 CCDC144AA2RUR9 1427 aa16.42■□□□□ 0.22
POLR2B-210ENST00000495311 TMEM2Q9UHN6 1383 aa16.39■□□□□ 0.21
POLR2B-210ENST00000495311 ADGRB3O60242 1522 aa16.39■□□□□ 0.21
POLR2B-210ENST00000495311 RPGRIP1LQ68CZ1 1315 aa16.38■□□□□ 0.21
POLR2B-210ENST00000495311 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
POLR2B-210ENST00000495311 SPATA31E1Q6ZUB1 1445 aa16.37■□□□□ 0.21
POLR2B-210ENST00000495311 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
POLR2B-210ENST00000495311 STAG3Q9UJ98 1225 aa16.37■□□□□ 0.21
POLR2B-210ENST00000495311 CLTCL1P53675 1640 aa16.37■□□□□ 0.21
POLR2B-210ENST00000495311 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
POLR2B-210ENST00000495311 TMEM131LA2VDJ0 1609 aa16.36■□□□□ 0.21
POLR2B-210ENST00000495311 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
POLR2B-210ENST00000495311 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
POLR2B-210ENST00000495311 TXNDC2Q86VQ3 553 aa16.35■□□□□ 0.21
POLR2B-210ENST00000495311 STAC3Q96MF2 364 aa16.35■□□□□ 0.21
POLR2B-210ENST00000495311 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.33■□□□□ 0.2
POLR2B-210ENST00000495311 TMEM94Q12767 1356 aa16.33■□□□□ 0.2
POLR2B-210ENST00000495311 ZFYVE9O95405 1425 aa16.33■□□□□ 0.2
POLR2B-210ENST00000495311 NKTRP30414 1462 aaKnown RBP16.31■□□□□ 0.2
POLR2B-210ENST00000495311 CHGAP10645 457 aaKnown RBP16.31■□□□□ 0.2
POLR2B-210ENST00000495311 SIN3AQ96ST3 1273 aa16.31■□□□□ 0.2
POLR2B-210ENST00000495311 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
POLR2B-210ENST00000495311 PHLPP1O60346 1717 aa16.31■□□□□ 0.2
POLR2B-210ENST00000495311 COL16A1Q07092 1604 aaPredicted RBP16.3■□□□□ 0.2
POLR2B-210ENST00000495311 TIMELESSQ9UNS1 1208 aa16.3■□□□□ 0.2
POLR2B-210ENST00000495311 EID1Q9Y6B2 187 aa16.3■□□□□ 0.2
POLR2B-210ENST00000495311 RIMS2Q9UQ26 1411 aa16.29■□□□□ 0.2
POLR2B-210ENST00000495311 VGFO15240 615 aaPredicted RBP16.29■□□□□ 0.2
POLR2B-210ENST00000495311 CCER1Q8TC90 406 aaPredicted RBP16.29■□□□□ 0.2
POLR2B-210ENST00000495311 ZNF326Q5BKZ1 582 aaKnown RBP16.28■□□□□ 0.2
POLR2B-210ENST00000495311 KIF1BO60333 1816 aa16.27■□□□□ 0.2
POLR2B-210ENST00000495311 RGL3Q3MIN7 710 aa16.27■□□□□ 0.2
POLR2B-210ENST00000495311 POTEAQ6S8J7 498 aa16.27■□□□□ 0.2
POLR2B-210ENST00000495311 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
POLR2B-210ENST00000495311 SRCAPQ6ZRS2 3230 aa16.27■□□□□ 0.19
POLR2B-210ENST00000495311 KCNA6P17658 529 aa16.26■□□□□ 0.19
POLR2B-210ENST00000495311 SLC26A8Q96RN1 970 aa16.25■□□□□ 0.19
POLR2B-210ENST00000495311 PLEKHG1Q9ULL1 1385 aa16.25■□□□□ 0.19
POLR2B-210ENST00000495311 NEXMIFQ5QGS0 1516 aa16.24■□□□□ 0.19
POLR2B-210ENST00000495311 NEUROD1Q13562 356 aa16.24■□□□□ 0.19
POLR2B-210ENST00000495311 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.23■□□□□ 0.19
POLR2B-210ENST00000495311 L3MBTL2Q969R5 705 aa16.23■□□□□ 0.19
POLR2B-210ENST00000495311 LRP6O75581 1613 aa16.23■□□□□ 0.19
POLR2B-210ENST00000495311 DCAF11Q8TEB1 546 aa16.22■□□□□ 0.19
POLR2B-210ENST00000495311 MYOM2P54296 1465 aa16.22■□□□□ 0.19
POLR2B-210ENST00000495311 NRXN1Q9ULB1 1477 aa16.22■□□□□ 0.19
POLR2B-210ENST00000495311 NRXN3Q9Y4C0 1643 aa16.21■□□□□ 0.19
POLR2B-210ENST00000495311 TBX22Q9Y458 520 aa16.21■□□□□ 0.19
POLR2B-210ENST00000495311 SHPRHQ149N8 1683 aa16.21■□□□□ 0.18
POLR2B-210ENST00000495311 ADAMTS13Q76LX8 1427 aa16.2■□□□□ 0.18
POLR2B-210ENST00000495311 PPP1R15AO75807 674 aaPredicted RBP16.2■□□□□ 0.18
POLR2B-210ENST00000495311 ADGRF5Q8IZF2 1346 aa16.19■□□□□ 0.18
POLR2B-210ENST00000495311 AHDC1Q5TGY3 1603 aaPredicted RBP16.19■□□□□ 0.18
POLR2B-210ENST00000495311 DIP2AQ14689 1571 aa16.19■□□□□ 0.18
POLR2B-210ENST00000495311 XRN1Q8IZH2 1706 aaKnown RBP16.17■□□□□ 0.18
POLR2B-210ENST00000495311 TONSLQ96HA7 1378 aa16.17■□□□□ 0.18
POLR2B-210ENST00000495311 NUTM2DQ5VT03 806 aaPredicted RBP16.17■□□□□ 0.18
POLR2B-210ENST00000495311 PROSER2Q86WR7 435 aaPredicted RBP16.17■□□□□ 0.18
POLR2B-210ENST00000495311 PPLO60437 1756 aa16.17■□□□□ 0.18
POLR2B-210ENST00000495311 PIK3C2GO75747 1445 aa16.17■□□□□ 0.18
POLR2B-210ENST00000495311 SETBP1Q9Y6X0 1596 aa16.17■□□□□ 0.18
POLR2B-210ENST00000495311 C14orf93Q9H972 538 aaKnown RBP16.16■□□□□ 0.18
POLR2B-210ENST00000495311 IFT172Q9UG01 1749 aa16.16■□□□□ 0.18
POLR2B-210ENST00000495311 PIK3R4Q99570 1358 aa16.15■□□□□ 0.18
POLR2B-210ENST00000495311 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
POLR2B-210ENST00000495311 MSH6P52701 1360 aa16.14■□□□□ 0.17
POLR2B-210ENST00000495311 PTPRUQ92729 1446 aa16.13■□□□□ 0.17
POLR2B-210ENST00000495311 NHSL1Q5SYE7 1610 aa16.13■□□□□ 0.17
POLR2B-210ENST00000495311 EP400Q96L91 3159 aa16.13■□□□□ 0.17
POLR2B-210ENST00000495311 JCADQ9P266 1359 aa16.13■□□□□ 0.17
POLR2B-210ENST00000495311 PRAG1Q86YV5 1406 aa16.12■□□□□ 0.17
POLR2B-210ENST00000495311 SLAIN2Q9P270 581 aa16.12■□□□□ 0.17
POLR2B-210ENST00000495311 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
POLR2B-210ENST00000495311 BCANQ96GW7 911 aa16.1■□□□□ 0.17
POLR2B-210ENST00000495311 NALCNQ8IZF0 1738 aa16.09■□□□□ 0.17
POLR2B-210ENST00000495311 CFAP70Q5T0N1 1121 aa16.09■□□□□ 0.17
POLR2B-210ENST00000495311 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.16
POLR2B-210ENST00000495311 METP08581 1390 aa16.08■□□□□ 0.16
POLR2B-210ENST00000495311 SIRT1Q96EB6 747 aa16.07■□□□□ 0.16
POLR2B-210ENST00000495311 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
POLR2B-210ENST00000495311 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
POLR2B-210ENST00000495311 GPRASP1Q5JY77 1395 aa16.04■□□□□ 0.16
POLR2B-210ENST00000495311 LRPPRCP42704 1394 aaKnown RBP16.03■□□□□ 0.16
POLR2B-210ENST00000495311 KIAA1210Q9ULL0 1709 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms