RNA–Protein interactions for RNA: ENST00000495044.5

CCDC30-211, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 2,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-211ENST00000495044 JCADQ9P266 1359 aa11.56□□□□□ -0.56
CCDC30-211ENST00000495044 DAPK1P53355 1430 aa11.55□□□□□ -0.56
CCDC30-211ENST00000495044 IDI1Q13907 227 aa11.55□□□□□ -0.56
CCDC30-211ENST00000495044 CHD2O14647 1828 aaKnown RBP11.54□□□□□ -0.56
CCDC30-211ENST00000495044 COL16A1Q07092 1604 aaPredicted RBP11.54□□□□□ -0.56
CCDC30-211ENST00000495044 SLAIN2Q9P270 581 aa11.53□□□□□ -0.56
CCDC30-211ENST00000495044 MYO5BQ9ULV0 1848 aa11.53□□□□□ -0.56
CCDC30-211ENST00000495044 GCC2Q8IWJ2 1684 aa11.53□□□□□ -0.56
CCDC30-211ENST00000495044 ANKRD30AQ9BXX3 1397 aa11.53□□□□□ -0.56
CCDC30-211ENST00000495044 MEX3CQ5U5Q3 659 aaKnown RBP11.53□□□□□ -0.56
CCDC30-211ENST00000495044 NOS1P29475 1434 aa11.52□□□□□ -0.57
CCDC30-211ENST00000495044 PPP1R15AO75807 674 aaPredicted RBP11.52□□□□□ -0.57
CCDC30-211ENST00000495044 C14orf37Q86TY3 774 aa11.51□□□□□ -0.57
CCDC30-211ENST00000495044 SLC52A1Q9NWF4 448 aa11.51□□□□□ -0.57
CCDC30-211ENST00000495044 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
CCDC30-211ENST00000495044 PLEKHG1Q9ULL1 1385 aa11.5□□□□□ -0.57
CCDC30-211ENST00000495044 RPRD2Q5VT52 1461 aaKnown RBP11.5□□□□□ -0.57
CCDC30-211ENST00000495044 SPATA31A6Q5VVP1 1343 aa11.5□□□□□ -0.57
CCDC30-211ENST00000495044 FGD6Q6ZV73 1430 aa11.5□□□□□ -0.57
CCDC30-211ENST00000495044 SHPRHQ149N8 1683 aa11.5□□□□□ -0.57
CCDC30-211ENST00000495044 APLP2Q06481 763 aa11.5□□□□□ -0.57
CCDC30-211ENST00000495044 LRP6O75581 1613 aa11.5□□□□□ -0.57
CCDC30-211ENST00000495044 HDGFP51858 240 aaKnown RBP11.49□□□□□ -0.57
CCDC30-211ENST00000495044 ZNF772Q68DY9 489 aaPredicted RBP11.49□□□□□ -0.57
CCDC30-211ENST00000495044 ZFYVE9O95405 1425 aa11.49□□□□□ -0.57
CCDC30-211ENST00000495044 RIMS2Q9UQ26 1411 aa11.49□□□□□ -0.57
CCDC30-211ENST00000495044 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
CCDC30-211ENST00000495044 AHDC1Q5TGY3 1603 aaPredicted RBP11.48□□□□□ -0.57
CCDC30-211ENST00000495044 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.48□□□□□ -0.57
CCDC30-211ENST00000495044 TMEM131LA2VDJ0 1609 aa11.48□□□□□ -0.57
CCDC30-211ENST00000495044 DIP2AQ14689 1571 aa11.47□□□□□ -0.57
CCDC30-211ENST00000495044 NCOA3Q9Y6Q9 1424 aa11.47□□□□□ -0.57
CCDC30-211ENST00000495044 ATF3P18847 181 aa11.46□□□□□ -0.57
CCDC30-211ENST00000495044 CADPS2Q86UW7 1296 aa11.45□□□□□ -0.58
CCDC30-211ENST00000495044 UPF1Q92900 1129 aaKnown RBP eCLIP11.45□□□□□ -0.58
CCDC30-211ENST00000495044 ADGRL2O95490 1459 aa11.45□□□□□ -0.58
CCDC30-211ENST00000495044 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
CCDC30-211ENST00000495044 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCDC30-211ENST00000495044 LOC105371045A0A1W2PR82 267 aa11.43□□□□□ -0.58
CCDC30-211ENST00000495044 TBX22Q9Y458 520 aa11.43□□□□□ -0.58
CCDC30-211ENST00000495044 TRPM2O94759 1503 aa11.43□□□□□ -0.58
CCDC30-211ENST00000495044 ANKRD50Q9ULJ7 1429 aa11.43□□□□□ -0.58
CCDC30-211ENST00000495044 RXRBP28702 533 aa11.43□□□□□ -0.58
CCDC30-211ENST00000495044 C19orf44Q9H6X5 657 aa11.43□□□□□ -0.58
CCDC30-211ENST00000495044 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
CCDC30-211ENST00000495044 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
CCDC30-211ENST00000495044 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
CCDC30-211ENST00000495044 PIK3R4Q99570 1358 aa11.42□□□□□ -0.58
CCDC30-211ENST00000495044 CDK12Q9NYV4 1490 aaPredicted RBP11.42□□□□□ -0.58
CCDC30-211ENST00000495044 UNC13BO14795 1591 aa11.42□□□□□ -0.58
CCDC30-211ENST00000495044 ADAMTS13Q76LX8 1427 aa11.41□□□□□ -0.58
CCDC30-211ENST00000495044 E9PCH4 1651 aa11.41□□□□□ -0.58
CCDC30-211ENST00000495044 NUTM2DQ5VT03 806 aaPredicted RBP11.41□□□□□ -0.58
CCDC30-211ENST00000495044 FAM50AQ14320 339 aaKnown RBP11.4□□□□□ -0.58
CCDC30-211ENST00000495044 ASXL1Q8IXJ9 1541 aa11.4□□□□□ -0.58
CCDC30-211ENST00000495044 NHSL1Q5SYE7 1610 aa11.39□□□□□ -0.59
CCDC30-211ENST00000495044 DCCP43146 1447 aa11.39□□□□□ -0.59
CCDC30-211ENST00000495044 AFF2P51816 1311 aa11.39□□□□□ -0.59
CCDC30-211ENST00000495044 BRINP3Q76B58 766 aa11.39□□□□□ -0.59
CCDC30-211ENST00000495044 AMOTL2Q9Y2J4 779 aa11.38□□□□□ -0.59
CCDC30-211ENST00000495044 XRN1Q8IZH2 1706 aaKnown RBP11.37□□□□□ -0.59
CCDC30-211ENST00000495044 IQGAP3Q86VI3 1631 aa11.37□□□□□ -0.59
CCDC30-211ENST00000495044 SETD5Q9C0A6 1442 aa11.36□□□□□ -0.59
CCDC30-211ENST00000495044 C8orf37Q96NL8 207 aa11.36□□□□□ -0.59
CCDC30-211ENST00000495044 RGS12O14924 1447 aa11.36□□□□□ -0.59
CCDC30-211ENST00000495044 MST1RQ04912 1400 aa11.35□□□□□ -0.59
CCDC30-211ENST00000495044 PTPRUQ92729 1446 aa11.35□□□□□ -0.59
CCDC30-211ENST00000495044 NRXN3Q9Y4C0 1643 aa11.34□□□□□ -0.59
CCDC30-211ENST00000495044 SETBP1Q9Y6X0 1596 aa11.34□□□□□ -0.59
CCDC30-211ENST00000495044 LRRC59Q96AG4 307 aaKnown RBP11.34□□□□□ -0.59
CCDC30-211ENST00000495044 NALCNQ8IZF0 1738 aa11.33□□□□□ -0.6
CCDC30-211ENST00000495044 SPHKAPQ2M3C7 1700 aa11.33□□□□□ -0.6
CCDC30-211ENST00000495044 RBM6P78332 1123 aaKnown RBP11.33□□□□□ -0.6
CCDC30-211ENST00000495044 QTRT2Q9H974 415 aaKnown RBP11.33□□□□□ -0.6
CCDC30-211ENST00000495044 PNPLA6Q8IY17 1366 aa11.32□□□□□ -0.6
CCDC30-211ENST00000495044 ADGRL3Q9HAR2 1447 aa11.31□□□□□ -0.6
CCDC30-211ENST00000495044 ZNF326Q5BKZ1 582 aaKnown RBP11.31□□□□□ -0.6
CCDC30-211ENST00000495044 NGLY1Q96IV0 654 aa11.31□□□□□ -0.6
CCDC30-211ENST00000495044 NUP155O75694 1391 aa11.3□□□□□ -0.6
CCDC30-211ENST00000495044 ATAD2Q6PL18 1390 aa11.3□□□□□ -0.6
CCDC30-211ENST00000495044 ROCK1Q13464 1354 aa11.3□□□□□ -0.6
CCDC30-211ENST00000495044 ADAMTS2O95450 1211 aa11.29□□□□□ -0.6
CCDC30-211ENST00000495044 DDX17Q92841 729 aaKnown RBP11.29□□□□□ -0.6
CCDC30-211ENST00000495044 METP08581 1390 aa11.29□□□□□ -0.6
CCDC30-211ENST00000495044 LAMC1P11047 1609 aa11.27□□□□□ -0.6
CCDC30-211ENST00000495044 KIF1BO60333 1816 aa11.26□□□□□ -0.61
CCDC30-211ENST00000495044 C1orf167Q5SNV9 1468 aa11.26□□□□□ -0.61
CCDC30-211ENST00000495044 USP21Q9UK80 565 aa11.26□□□□□ -0.61
CCDC30-211ENST00000495044 NEXMIFQ5QGS0 1516 aa11.25□□□□□ -0.61
CCDC30-211ENST00000495044 TRPC5Q9UL62 973 aaPredicted RBP11.25□□□□□ -0.61
CCDC30-211ENST00000495044 CLTCL1P53675 1640 aa11.25□□□□□ -0.61
CCDC30-211ENST00000495044 ZRANB1Q9UGI0 708 aa11.25□□□□□ -0.61
CCDC30-211ENST00000495044 PTCH1Q13635 1447 aa11.24□□□□□ -0.61
CCDC30-211ENST00000495044 ITGAEP38570 1179 aa11.24□□□□□ -0.61
CCDC30-211ENST00000495044 COL22A1Q8NFW1 1626 aaPredicted RBP11.24□□□□□ -0.61
CCDC30-211ENST00000495044 MARF1Q9Y4F3 1742 aaKnown RBP11.23□□□□□ -0.61
CCDC30-211ENST00000495044 ATRNO75882 1429 aa11.22□□□□□ -0.61
CCDC30-211ENST00000495044 SOS2Q07890 1332 aaPredicted RBP11.21□□□□□ -0.61
CCDC30-211ENST00000495044 CACNB1Q02641 598 aaPredicted RBP11.21□□□□□ -0.61
CCDC30-211ENST00000495044 SRCAPQ6ZRS2 3230 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms