RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 ZNF316A6NFI3 1004 aaPredicted RBP15.68■□□□□ 0.1
PKP4-215ENST00000494945 IDI1Q13907 227 aa15.68■□□□□ 0.1
PKP4-215ENST00000494945 ZNF142P52746 1687 aaPredicted RBP15.67■□□□□ 0.1
PKP4-215ENST00000494945 NLRP1Q9C000 1473 aa15.67■□□□□ 0.1
PKP4-215ENST00000494945 CHGAP10645 457 aaKnown RBP15.66■□□□□ 0.1
PKP4-215ENST00000494945 ZNF326Q5BKZ1 582 aaKnown RBP15.66■□□□□ 0.1
PKP4-215ENST00000494945 A2ML1A8K2U0 1454 aa15.65■□□□□ 0.1
PKP4-215ENST00000494945 ZFYVE9O95405 1425 aa15.64■□□□□ 0.09
PKP4-215ENST00000494945 SETBP1Q9Y6X0 1596 aa15.64■□□□□ 0.09
PKP4-215ENST00000494945 GPRASP1Q5JY77 1395 aa15.62■□□□□ 0.09
PKP4-215ENST00000494945 ROCK2O75116 1388 aaKnown RBP15.61■□□□□ 0.09
PKP4-215ENST00000494945 PIK3C2GO75747 1445 aa15.6■□□□□ 0.09
PKP4-215ENST00000494945 SETD1AO15047 1707 aaKnown RBP15.6■□□□□ 0.09
PKP4-215ENST00000494945 EIF4G2P78344 907 aaKnown RBP eCLIP15.6■□□□□ 0.09
PKP4-215ENST00000494945 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
PKP4-215ENST00000494945 CEP170BQ9Y4F5 1589 aaPredicted RBP15.6■□□□□ 0.09
PKP4-215ENST00000494945 CEBPAP49715 358 aaPredicted RBP15.59■□□□□ 0.09
PKP4-215ENST00000494945 VGFO15240 615 aaPredicted RBP15.58■□□□□ 0.08
PKP4-215ENST00000494945 ADGRF5Q8IZF2 1346 aa15.58■□□□□ 0.08
PKP4-215ENST00000494945 USP47Q96K76 1375 aa15.57■□□□□ 0.08
PKP4-215ENST00000494945 RIMS2Q9UQ26 1411 aa15.57■□□□□ 0.08
PKP4-215ENST00000494945 PTPRMP28827 1452 aa15.57■□□□□ 0.08
PKP4-215ENST00000494945 CARD11Q9BXL7 1154 aa15.56■□□□□ 0.08
PKP4-215ENST00000494945 SLIT1O75093 1534 aa15.56■□□□□ 0.08
PKP4-215ENST00000494945 NRXN3Q9Y4C0 1643 aa15.56■□□□□ 0.08
PKP4-215ENST00000494945 ARHGEF28Q8N1W1 1705 aaKnown RBP15.55■□□□□ 0.08
PKP4-215ENST00000494945 HSPA5P11021 654 aaKnown RBP15.55■□□□□ 0.08
PKP4-215ENST00000494945 ALKQ9UM73 1620 aa15.54■□□□□ 0.08
PKP4-215ENST00000494945 ADGRB1O14514 1584 aa15.53■□□□□ 0.08
PKP4-215ENST00000494945 ARHGAP23Q9P227 1491 aa15.53■□□□□ 0.08
PKP4-215ENST00000494945 NBPF1Q3BBV0 1214 aa15.53■□□□□ 0.08
PKP4-215ENST00000494945 SCAF11Q99590 1463 aaKnown RBP15.52■□□□□ 0.08
PKP4-215ENST00000494945 TMEM2Q9UHN6 1383 aa15.52■□□□□ 0.08
PKP4-215ENST00000494945 QRICH2Q9H0J4 1663 aa15.52■□□□□ 0.08
PKP4-215ENST00000494945 HDGFP51858 240 aaKnown RBP15.52■□□□□ 0.08
PKP4-215ENST00000494945 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.52■□□□□ 0.08
PKP4-215ENST00000494945 PLPPR3Q6T4P5 718 aa15.51■□□□□ 0.07
PKP4-215ENST00000494945 C14orf93Q9H972 538 aaKnown RBP15.51■□□□□ 0.07
PKP4-215ENST00000494945 KNDC1Q76NI1 1749 aa15.51■□□□□ 0.07
PKP4-215ENST00000494945 CFAP70Q5T0N1 1121 aa15.5■□□□□ 0.07
PKP4-215ENST00000494945 ASXL1Q8IXJ9 1541 aa15.49■□□□□ 0.07
PKP4-215ENST00000494945 HIRIP3Q9BW71 556 aaPredicted RBP15.49■□□□□ 0.07
PKP4-215ENST00000494945 EIF3AQ14152 1382 aaKnown RBP15.49■□□□□ 0.07
PKP4-215ENST00000494945 DIP2AQ14689 1571 aa15.47■□□□□ 0.07
PKP4-215ENST00000494945 NUTM2DQ5VT03 806 aaPredicted RBP15.47■□□□□ 0.07
PKP4-215ENST00000494945 THEMISQ8N1K5 641 aaPredicted RBP15.47■□□□□ 0.07
PKP4-215ENST00000494945 ST20-MTHFSA0A0A6YYL1 179 aa15.44■□□□□ 0.06
PKP4-215ENST00000494945 DIEXFQ68CQ4 756 aaKnown RBP15.44■□□□□ 0.06
PKP4-215ENST00000494945 PLEKHG1Q9ULL1 1385 aa15.44■□□□□ 0.06
PKP4-215ENST00000494945 EID1Q9Y6B2 187 aa15.43■□□□□ 0.06
PKP4-215ENST00000494945 CCDC7Q96M83 1385 aa15.43■□□□□ 0.06
PKP4-215ENST00000494945 DLC1Q96QB1 1528 aa15.42■□□□□ 0.06
PKP4-215ENST00000494945 YTHDC2Q9H6S0 1430 aaKnown RBP15.41■□□□□ 0.06
PKP4-215ENST00000494945 WASHC2AQ641Q2 1341 aa15.41■□□□□ 0.06
PKP4-215ENST00000494945 CHD2O14647 1828 aaKnown RBP15.4■□□□□ 0.06
PKP4-215ENST00000494945 MED14O60244 1454 aa15.4■□□□□ 0.06
PKP4-215ENST00000494945 TXNDC2Q86VQ3 553 aa15.4■□□□□ 0.06
PKP4-215ENST00000494945 SBNO2Q9Y2G9 1366 aa15.39■□□□□ 0.05
PKP4-215ENST00000494945 SLC24A1O60721 1099 aa15.39■□□□□ 0.05
PKP4-215ENST00000494945 LTKP29376 864 aa15.39■□□□□ 0.05
PKP4-215ENST00000494945 TMEM132EQ6IEE7 984 aa15.39■□□□□ 0.05
PKP4-215ENST00000494945 ADAMTS13Q76LX8 1427 aa15.39■□□□□ 0.05
PKP4-215ENST00000494945 MYOM1P52179 1685 aa15.38■□□□□ 0.05
PKP4-215ENST00000494945 CPS1P31327 1500 aa15.38■□□□□ 0.05
PKP4-215ENST00000494945 KDM4FA0A1W2PPD8 638 aa15.38■□□□□ 0.05
PKP4-215ENST00000494945 C11orf95C9JLR9 678 aaPredicted RBP15.38■□□□□ 0.05
PKP4-215ENST00000494945 TESK2Q96S53 571 aa15.38■□□□□ 0.05
PKP4-215ENST00000494945 KIF7Q2M1P5 1343 aa15.38■□□□□ 0.05
PKP4-215ENST00000494945 XRN1Q8IZH2 1706 aaKnown RBP15.37■□□□□ 0.05
PKP4-215ENST00000494945 LRPPRCP42704 1394 aaKnown RBP15.36■□□□□ 0.05
PKP4-215ENST00000494945 CENPJQ9HC77 1338 aaPredicted RBP15.36■□□□□ 0.05
PKP4-215ENST00000494945 TMF1P82094 1093 aa15.35■□□□□ 0.05
PKP4-215ENST00000494945 DDX10Q13206 875 aaKnown RBP15.35■□□□□ 0.05
PKP4-215ENST00000494945 TRAK1Q9UPV9 953 aa15.35■□□□□ 0.05
PKP4-215ENST00000494945 TECPR2O15040 1411 aa15.34■□□□□ 0.05
PKP4-215ENST00000494945 ANKLE2Q86XL3 938 aa15.34■□□□□ 0.05
PKP4-215ENST00000494945 BCANQ96GW7 911 aa15.34■□□□□ 0.05
PKP4-215ENST00000494945 ABCC11Q96J66 1382 aa15.34■□□□□ 0.05
PKP4-215ENST00000494945 DISP3Q9P2K9 1392 aa15.34■□□□□ 0.05
PKP4-215ENST00000494945 METP08581 1390 aa15.33■□□□□ 0.04
PKP4-215ENST00000494945 CDCA8Q53HL2 280 aa15.32■□□□□ 0.04
PKP4-215ENST00000494945 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
PKP4-215ENST00000494945 TBX22Q9Y458 520 aa15.32■□□□□ 0.04
PKP4-215ENST00000494945 STRCQ7RTU9 1775 aa15.31■□□□□ 0.04
PKP4-215ENST00000494945 PIK3R4Q99570 1358 aa15.31■□□□□ 0.04
PKP4-215ENST00000494945 FAM135BQ49AJ0 1406 aa15.31■□□□□ 0.04
PKP4-215ENST00000494945 SIRT1Q96EB6 747 aa15.3■□□□□ 0.04
PKP4-215ENST00000494945 TULP4Q9NRJ4 1543 aa15.3■□□□□ 0.04
PKP4-215ENST00000494945 STK26Q9P289 416 aa15.3■□□□□ 0.04
PKP4-215ENST00000494945 LMTK3Q96Q04 1460 aa15.29■□□□□ 0.04
PKP4-215ENST00000494945 NPHP4O75161 1426 aaPredicted RBP15.29■□□□□ 0.04
PKP4-215ENST00000494945 ADGRB2O60241 1585 aa15.28■□□□□ 0.04
PKP4-215ENST00000494945 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.28■□□□□ 0.04
PKP4-215ENST00000494945 SLC26A8Q96RN1 970 aa15.27■□□□□ 0.04
PKP4-215ENST00000494945 POLR3GLQ9BT43 218 aa15.27■□□□□ 0.04
PKP4-215ENST00000494945 NWD1Q149M9 1564 aa15.27■□□□□ 0.03
PKP4-215ENST00000494945 PTCH1Q13635 1447 aa15.26■□□□□ 0.03
PKP4-215ENST00000494945 PTPRUQ92729 1446 aa15.26■□□□□ 0.03
PKP4-215ENST00000494945 PRAM1Q96QH2 718 aa15.26■□□□□ 0.03
PKP4-215ENST00000494945 POGKQ9P215 609 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms