RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
KDM1A-205ENST00000494920 STAG3Q9UJ98 1225 aa16.16■□□□□ 0.18
KDM1A-205ENST00000494920 SETBP1Q9Y6X0 1596 aa16.15■□□□□ 0.18
KDM1A-205ENST00000494920 NCKAP5LQ9HCH0 1330 aa16.15■□□□□ 0.18
KDM1A-205ENST00000494920 SETD1AO15047 1707 aaKnown RBP16.14■□□□□ 0.17
KDM1A-205ENST00000494920 NPHP4O75161 1426 aaPredicted RBP16.14■□□□□ 0.17
KDM1A-205ENST00000494920 CHGAP10645 457 aaKnown RBP16.14■□□□□ 0.17
KDM1A-205ENST00000494920 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.17
KDM1A-205ENST00000494920 MYOM2P54296 1465 aa16.14■□□□□ 0.17
KDM1A-205ENST00000494920 NRXN1Q9ULB1 1477 aa16.14■□□□□ 0.17
KDM1A-205ENST00000494920 RPGRIP1LQ68CZ1 1315 aa16.14■□□□□ 0.17
KDM1A-205ENST00000494920 PLEKHG1Q9ULL1 1385 aa16.13■□□□□ 0.17
KDM1A-205ENST00000494920 CLSPNQ9HAW4 1339 aa16.13■□□□□ 0.17
KDM1A-205ENST00000494920 TXNDC2Q86VQ3 553 aa16.12■□□□□ 0.17
KDM1A-205ENST00000494920 SIN3AQ96ST3 1273 aa16.12■□□□□ 0.17
KDM1A-205ENST00000494920 ADAMTS13Q76LX8 1427 aa16.11■□□□□ 0.17
KDM1A-205ENST00000494920 DIP2AQ14689 1571 aa16.1■□□□□ 0.17
KDM1A-205ENST00000494920 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.1■□□□□ 0.17
KDM1A-205ENST00000494920 ZNF326Q5BKZ1 582 aaKnown RBP16.09■□□□□ 0.17
KDM1A-205ENST00000494920 EID1Q9Y6B2 187 aa16.09■□□□□ 0.17
KDM1A-205ENST00000494920 PIK3C2GO75747 1445 aa16.09■□□□□ 0.17
KDM1A-205ENST00000494920 RGL3Q3MIN7 710 aa16.08■□□□□ 0.16
KDM1A-205ENST00000494920 NUTM2DQ5VT03 806 aaPredicted RBP16.07■□□□□ 0.16
KDM1A-205ENST00000494920 STRCP1A6NGW2 1772 aa16.06■□□□□ 0.16
KDM1A-205ENST00000494920 ADGRF5Q8IZF2 1346 aa16.06■□□□□ 0.16
KDM1A-205ENST00000494920 ALKQ9UM73 1620 aa16.05■□□□□ 0.16
KDM1A-205ENST00000494920 NWD1Q149M9 1564 aa16.05■□□□□ 0.16
KDM1A-205ENST00000494920 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
KDM1A-205ENST00000494920 HDGFP51858 240 aaKnown RBP16.05■□□□□ 0.16
KDM1A-205ENST00000494920 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
KDM1A-205ENST00000494920 CHD2O14647 1828 aaKnown RBP16.04■□□□□ 0.16
KDM1A-205ENST00000494920 VGFO15240 615 aaPredicted RBP16.04■□□□□ 0.16
KDM1A-205ENST00000494920 LAMC1P11047 1609 aa16.04■□□□□ 0.16
KDM1A-205ENST00000494920 LTBP4Q8N2S1 1624 aa16.04■□□□□ 0.16
KDM1A-205ENST00000494920 PPP1R15AO75807 674 aaPredicted RBP16.03■□□□□ 0.16
KDM1A-205ENST00000494920 XRN1Q8IZH2 1706 aaKnown RBP16.02■□□□□ 0.16
KDM1A-205ENST00000494920 L3MBTL2Q969R5 705 aa16.02■□□□□ 0.16
KDM1A-205ENST00000494920 STAC3Q96MF2 364 aa16.02■□□□□ 0.16
KDM1A-205ENST00000494920 KIAA1210Q9ULL0 1709 aa16.02■□□□□ 0.15
KDM1A-205ENST00000494920 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.15
KDM1A-205ENST00000494920 NEUROD1Q13562 356 aa16.01■□□□□ 0.15
KDM1A-205ENST00000494920 TBX22Q9Y458 520 aa16.01■□□□□ 0.15
KDM1A-205ENST00000494920 PIK3R4Q99570 1358 aa16■□□□□ 0.15
KDM1A-205ENST00000494920 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
KDM1A-205ENST00000494920 PTPRUQ92729 1446 aa16■□□□□ 0.15
KDM1A-205ENST00000494920 ADGRB1O14514 1584 aa16■□□□□ 0.15
KDM1A-205ENST00000494920 DCAF11Q8TEB1 546 aa15.99■□□□□ 0.15
KDM1A-205ENST00000494920 SLC26A8Q96RN1 970 aa15.99■□□□□ 0.15
KDM1A-205ENST00000494920 METP08581 1390 aa15.99■□□□□ 0.15
KDM1A-205ENST00000494920 TRPM1Q7Z4N2 1603 aa15.97■□□□□ 0.15
KDM1A-205ENST00000494920 ZNF335Q9H4Z2 1342 aaPredicted RBP15.97■□□□□ 0.15
KDM1A-205ENST00000494920 TONSLQ96HA7 1378 aa15.97■□□□□ 0.15
KDM1A-205ENST00000494920 KNDC1Q76NI1 1749 aa15.97■□□□□ 0.15
KDM1A-205ENST00000494920 C14orf93Q9H972 538 aaKnown RBP15.96■□□□□ 0.15
KDM1A-205ENST00000494920 NKTRP30414 1462 aaKnown RBP15.96■□□□□ 0.14
KDM1A-205ENST00000494920 XIRP1Q702N8 1843 aaKnown RBP15.96■□□□□ 0.14
KDM1A-205ENST00000494920 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
KDM1A-205ENST00000494920 TECPR2O15040 1411 aa15.94■□□□□ 0.14
KDM1A-205ENST00000494920 CPS1P31327 1500 aa15.94■□□□□ 0.14
KDM1A-205ENST00000494920 TIMELESSQ9UNS1 1208 aa15.94■□□□□ 0.14
KDM1A-205ENST00000494920 KDM2AQ9Y2K7 1162 aa15.94■□□□□ 0.14
KDM1A-205ENST00000494920 CFAP70Q5T0N1 1121 aa15.93■□□□□ 0.14
KDM1A-205ENST00000494920 KCNA6P17658 529 aa15.92■□□□□ 0.14
KDM1A-205ENST00000494920 NBPF8Q3BBV2 869 aa15.92■□□□□ 0.14
KDM1A-205ENST00000494920 LRRC7Q96NW7 1537 aa15.92■□□□□ 0.14
KDM1A-205ENST00000494920 PTCH1Q13635 1447 aa15.92■□□□□ 0.14
KDM1A-205ENST00000494920 LRPPRCP42704 1394 aaKnown RBP15.91■□□□□ 0.14
KDM1A-205ENST00000494920 RALGAPBQ86X10 1494 aa15.91■□□□□ 0.14
KDM1A-205ENST00000494920 BCANQ96GW7 911 aa15.9■□□□□ 0.14
KDM1A-205ENST00000494920 YTHDC2Q9H6S0 1430 aaKnown RBP15.9■□□□□ 0.14
KDM1A-205ENST00000494920 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
KDM1A-205ENST00000494920 GPRASP1Q5JY77 1395 aa15.89■□□□□ 0.13
KDM1A-205ENST00000494920 ABCC11Q96J66 1382 aa15.88■□□□□ 0.13
KDM1A-205ENST00000494920 ARHGEF28Q8N1W1 1705 aaKnown RBP15.88■□□□□ 0.13
KDM1A-205ENST00000494920 ROBO2Q9HCK4 1378 aa15.87■□□□□ 0.13
KDM1A-205ENST00000494920 IQSEC2Q5JU85 1478 aa15.87■□□□□ 0.13
KDM1A-205ENST00000494920 TMEM132EQ6IEE7 984 aa15.87■□□□□ 0.13
KDM1A-205ENST00000494920 AMOTL2Q9Y2J4 779 aa15.87■□□□□ 0.13
KDM1A-205ENST00000494920 NBPF1Q3BBV0 1214 aa15.86■□□□□ 0.13
KDM1A-205ENST00000494920 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
KDM1A-205ENST00000494920 FAM135BQ49AJ0 1406 aa15.85■□□□□ 0.13
KDM1A-205ENST00000494920 NCOA3Q9Y6Q9 1424 aa15.84■□□□□ 0.13
KDM1A-205ENST00000494920 TMEM94Q12767 1356 aa15.83■□□□□ 0.12
KDM1A-205ENST00000494920 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.82■□□□□ 0.12
KDM1A-205ENST00000494920 SIRT1Q96EB6 747 aa15.82■□□□□ 0.12
KDM1A-205ENST00000494920 PLEKHH1Q9ULM0 1364 aa15.81■□□□□ 0.12
KDM1A-205ENST00000494920 ADGRL3Q9HAR2 1447 aa15.8■□□□□ 0.12
KDM1A-205ENST00000494920 ROCK2O75116 1388 aaKnown RBP15.8■□□□□ 0.12
KDM1A-205ENST00000494920 ADGRB2O60241 1585 aa15.79■□□□□ 0.12
KDM1A-205ENST00000494920 CERKQ8TCT0 537 aa15.79■□□□□ 0.12
KDM1A-205ENST00000494920 PROSER2Q86WR7 435 aaPredicted RBP15.78■□□□□ 0.12
KDM1A-205ENST00000494920 STK26Q9P289 416 aa15.78■□□□□ 0.12
KDM1A-205ENST00000494920 CDC42BPGQ6DT37 1551 aa15.78■□□□□ 0.12
KDM1A-205ENST00000494920 DCCP43146 1447 aa15.77■□□□□ 0.12
KDM1A-205ENST00000494920 RBM33Q96EV2 1170 aaKnown RBP15.77■□□□□ 0.12
KDM1A-205ENST00000494920 QRICH2Q9H0J4 1663 aa15.76■□□□□ 0.11
KDM1A-205ENST00000494920 WAPLQ7Z5K2 1190 aa15.75■□□□□ 0.11
KDM1A-205ENST00000494920 TRAK1Q9UPV9 953 aa15.75■□□□□ 0.11
KDM1A-205ENST00000494920 PRAM1Q96QH2 718 aa15.74■□□□□ 0.11
KDM1A-205ENST00000494920 FMN2Q9NZ56 1722 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms