RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 ZFYVE9O95405 1425 aa13.98□□□□□ -0.17
CALCA-206ENST00000494746 THEMISQ8N1K5 641 aaPredicted RBP13.97□□□□□ -0.17
CALCA-206ENST00000494746 POLR1AO95602 1720 aaPredicted RBP13.97□□□□□ -0.17
CALCA-206ENST00000494746 ZNF326Q5BKZ1 582 aaKnown RBP13.97□□□□□ -0.17
CALCA-206ENST00000494746 RIMS2Q9UQ26 1411 aa13.96□□□□□ -0.17
CALCA-206ENST00000494746 STRCQ7RTU9 1775 aa13.95□□□□□ -0.18
CALCA-206ENST00000494746 NUTM2DQ5VT03 806 aaPredicted RBP13.94□□□□□ -0.18
CALCA-206ENST00000494746 SCAF11Q99590 1463 aaKnown RBP13.93□□□□□ -0.18
CALCA-206ENST00000494746 LTKP29376 864 aa13.93□□□□□ -0.18
CALCA-206ENST00000494746 L3MBTL2Q969R5 705 aa13.92□□□□□ -0.18
CALCA-206ENST00000494746 TONSLQ96HA7 1378 aa13.92□□□□□ -0.18
CALCA-206ENST00000494746 RPGRIP1LQ68CZ1 1315 aa13.91□□□□□ -0.18
CALCA-206ENST00000494746 MYOM2P54296 1465 aa13.91□□□□□ -0.18
CALCA-206ENST00000494746 TXNDC2Q86VQ3 553 aa13.9□□□□□ -0.18
CALCA-206ENST00000494746 DCAF11Q8TEB1 546 aa13.9□□□□□ -0.18
CALCA-206ENST00000494746 IQGAP1P46940 1657 aa13.9□□□□□ -0.18
CALCA-206ENST00000494746 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
CALCA-206ENST00000494746 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.18
CALCA-206ENST00000494746 NRXN3Q9Y4C0 1643 aa13.9□□□□□ -0.18
CALCA-206ENST00000494746 NRXN1Q9ULB1 1477 aa13.89□□□□□ -0.19
CALCA-206ENST00000494746 ADGRF5Q8IZF2 1346 aa13.89□□□□□ -0.19
CALCA-206ENST00000494746 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
CALCA-206ENST00000494746 EID1Q9Y6B2 187 aa13.89□□□□□ -0.19
CALCA-206ENST00000494746 MED14O60244 1454 aa13.88□□□□□ -0.19
CALCA-206ENST00000494746 PPP1R15AO75807 674 aaPredicted RBP13.88□□□□□ -0.19
CALCA-206ENST00000494746 PIK3C2GO75747 1445 aa13.88□□□□□ -0.19
CALCA-206ENST00000494746 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
CALCA-206ENST00000494746 KDM2AQ9Y2K7 1162 aa13.87□□□□□ -0.19
CALCA-206ENST00000494746 SETBP1Q9Y6X0 1596 aa13.87□□□□□ -0.19
CALCA-206ENST00000494746 PLEKHG1Q9ULL1 1385 aa13.87□□□□□ -0.19
CALCA-206ENST00000494746 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
CALCA-206ENST00000494746 HDGFP51858 240 aaKnown RBP13.86□□□□□ -0.19
CALCA-206ENST00000494746 SETD1AO15047 1707 aaKnown RBP13.86□□□□□ -0.19
CALCA-206ENST00000494746 NPHP4O75161 1426 aaPredicted RBP13.86□□□□□ -0.19
CALCA-206ENST00000494746 PRAG1Q86YV5 1406 aa13.85□□□□□ -0.19
CALCA-206ENST00000494746 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
CALCA-206ENST00000494746 ALKQ9UM73 1620 aa13.83□□□□□ -0.2
CALCA-206ENST00000494746 TIMELESSQ9UNS1 1208 aa13.83□□□□□ -0.2
CALCA-206ENST00000494746 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
CALCA-206ENST00000494746 LAMC1P11047 1609 aa13.82□□□□□ -0.2
CALCA-206ENST00000494746 STAC3Q96MF2 364 aa13.82□□□□□ -0.2
CALCA-206ENST00000494746 DIP2AQ14689 1571 aa13.82□□□□□ -0.2
CALCA-206ENST00000494746 TRPM1Q7Z4N2 1603 aa13.81□□□□□ -0.2
CALCA-206ENST00000494746 BCANQ96GW7 911 aa13.81□□□□□ -0.2
CALCA-206ENST00000494746 SLC26A8Q96RN1 970 aa13.81□□□□□ -0.2
CALCA-206ENST00000494746 ASXL1Q8IXJ9 1541 aa13.81□□□□□ -0.2
CALCA-206ENST00000494746 ZEB1P37275 1124 aaPredicted RBP13.8□□□□□ -0.2
CALCA-206ENST00000494746 NBPF8Q3BBV2 869 aa13.8□□□□□ -0.2
CALCA-206ENST00000494746 KIAA1210Q9ULL0 1709 aa13.8□□□□□ -0.2
CALCA-206ENST00000494746 CFAP70Q5T0N1 1121 aa13.79□□□□□ -0.2
CALCA-206ENST00000494746 METP08581 1390 aa13.79□□□□□ -0.2
CALCA-206ENST00000494746 ADGRB1O14514 1584 aa13.78□□□□□ -0.2
CALCA-206ENST00000494746 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
CALCA-206ENST00000494746 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.21
CALCA-206ENST00000494746 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
CALCA-206ENST00000494746 TBX22Q9Y458 520 aa13.76□□□□□ -0.21
CALCA-206ENST00000494746 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
CALCA-206ENST00000494746 NBPF1Q3BBV0 1214 aa13.76□□□□□ -0.21
CALCA-206ENST00000494746 PTPRUQ92729 1446 aa13.75□□□□□ -0.21
CALCA-206ENST00000494746 TMEM132EQ6IEE7 984 aa13.75□□□□□ -0.21
CALCA-206ENST00000494746 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
CALCA-206ENST00000494746 XRN1Q8IZH2 1706 aaKnown RBP13.75□□□□□ -0.21
CALCA-206ENST00000494746 NWD1Q149M9 1564 aa13.74□□□□□ -0.21
CALCA-206ENST00000494746 ROCK2O75116 1388 aaKnown RBP13.73□□□□□ -0.21
CALCA-206ENST00000494746 PIK3R4Q99570 1358 aa13.73□□□□□ -0.21
CALCA-206ENST00000494746 ZNF335Q9H4Z2 1342 aaPredicted RBP13.72□□□□□ -0.21
CALCA-206ENST00000494746 YTHDC2Q9H6S0 1430 aaKnown RBP13.72□□□□□ -0.21
CALCA-206ENST00000494746 KNDC1Q76NI1 1749 aa13.72□□□□□ -0.21
CALCA-206ENST00000494746 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.21
CALCA-206ENST00000494746 ARHGEF28Q8N1W1 1705 aaKnown RBP13.7□□□□□ -0.22
CALCA-206ENST00000494746 CPS1P31327 1500 aa13.7□□□□□ -0.22
CALCA-206ENST00000494746 LRPPRCP42704 1394 aaKnown RBP13.69□□□□□ -0.22
CALCA-206ENST00000494746 AMOTL2Q9Y2J4 779 aa13.69□□□□□ -0.22
CALCA-206ENST00000494746 TECPR2O15040 1411 aa13.69□□□□□ -0.22
CALCA-206ENST00000494746 KCNA6P17658 529 aa13.69□□□□□ -0.22
CALCA-206ENST00000494746 STK26Q9P289 416 aa13.69□□□□□ -0.22
CALCA-206ENST00000494746 NKTRP30414 1462 aaKnown RBP13.68□□□□□ -0.22
CALCA-206ENST00000494746 PTCH1Q13635 1447 aa13.68□□□□□ -0.22
CALCA-206ENST00000494746 ROBO2Q9HCK4 1378 aa13.68□□□□□ -0.22
CALCA-206ENST00000494746 LTBP4Q8N2S1 1624 aa13.68□□□□□ -0.22
CALCA-206ENST00000494746 ABCC11Q96J66 1382 aa13.68□□□□□ -0.22
CALCA-206ENST00000494746 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
CALCA-206ENST00000494746 TRAK1Q9UPV9 953 aa13.67□□□□□ -0.22
CALCA-206ENST00000494746 DLC1Q96QB1 1528 aa13.66□□□□□ -0.22
CALCA-206ENST00000494746 XIRP1Q702N8 1843 aaKnown RBP13.66□□□□□ -0.22
CALCA-206ENST00000494746 PLEKHH1Q9ULM0 1364 aa13.65□□□□□ -0.22
CALCA-206ENST00000494746 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
CALCA-206ENST00000494746 RBM33Q96EV2 1170 aaKnown RBP13.64□□□□□ -0.23
CALCA-206ENST00000494746 NALCNQ8IZF0 1738 aa13.63□□□□□ -0.23
CALCA-206ENST00000494746 WAPLQ7Z5K2 1190 aa13.63□□□□□ -0.23
CALCA-206ENST00000494746 USP47Q96K76 1375 aa13.63□□□□□ -0.23
CALCA-206ENST00000494746 QRICH2Q9H0J4 1663 aa13.63□□□□□ -0.23
CALCA-206ENST00000494746 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
CALCA-206ENST00000494746 PRAM1Q96QH2 718 aa13.62□□□□□ -0.23
CALCA-206ENST00000494746 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.62□□□□□ -0.23
CALCA-206ENST00000494746 TMEM94Q12767 1356 aa13.62□□□□□ -0.23
CALCA-206ENST00000494746 EIF3AQ14152 1382 aaKnown RBP13.61□□□□□ -0.23
CALCA-206ENST00000494746 SAFB2Q14151 953 aaKnown RBP eCLIP13.61□□□□□ -0.23
CALCA-206ENST00000494746 PROSER2Q86WR7 435 aaPredicted RBP13.61□□□□□ -0.23
CALCA-206ENST00000494746 SIRT1Q96EB6 747 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms