RNA–Protein interactions for RNA: ENST00000494586.5

CCSER2-208, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2

Gene CCSER2, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-208ENST00000494586 NRXN1Q9ULB1 1477 aa13.05□□□□□ -0.32
CCSER2-208ENST00000494586 SLIT1O75093 1534 aa13.05□□□□□ -0.32
CCSER2-208ENST00000494586 MYO3AQ8NEV4 1616 aa13.04□□□□□ -0.32
CCSER2-208ENST00000494586 CEP170BQ9Y4F5 1589 aaPredicted RBP13.03□□□□□ -0.32
CCSER2-208ENST00000494586 UBR1Q8IWV7 1749 aa13.03□□□□□ -0.32
CCSER2-208ENST00000494586 PLPPR3Q6T4P5 718 aa13.03□□□□□ -0.32
CCSER2-208ENST00000494586 EID1Q9Y6B2 187 aa13.03□□□□□ -0.32
CCSER2-208ENST00000494586 PRAG1Q86YV5 1406 aa13.03□□□□□ -0.32
CCSER2-208ENST00000494586 RIMS2Q9UQ26 1411 aa13.03□□□□□ -0.32
CCSER2-208ENST00000494586 NEXMIFQ5QGS0 1516 aa13.03□□□□□ -0.32
CCSER2-208ENST00000494586 ZNF142P52746 1687 aaPredicted RBP13.02□□□□□ -0.32
CCSER2-208ENST00000494586 NBPF8Q3BBV2 869 aa13.02□□□□□ -0.33
CCSER2-208ENST00000494586 C14orf93Q9H972 538 aaKnown RBP13.02□□□□□ -0.33
CCSER2-208ENST00000494586 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
CCSER2-208ENST00000494586 ADGRF5Q8IZF2 1346 aa13.02□□□□□ -0.33
CCSER2-208ENST00000494586 TXNDC2Q86VQ3 553 aa13.01□□□□□ -0.33
CCSER2-208ENST00000494586 ANKLE2Q86XL3 938 aa13.01□□□□□ -0.33
CCSER2-208ENST00000494586 PIK3C2GO75747 1445 aa13□□□□□ -0.33
CCSER2-208ENST00000494586 LTKP29376 864 aa13□□□□□ -0.33
CCSER2-208ENST00000494586 IFT172Q9UG01 1749 aa12.99□□□□□ -0.33
CCSER2-208ENST00000494586 PLEKHG1Q9ULL1 1385 aa12.99□□□□□ -0.33
CCSER2-208ENST00000494586 PPLO60437 1756 aa12.99□□□□□ -0.33
CCSER2-208ENST00000494586 GPRASP1Q5JY77 1395 aa12.98□□□□□ -0.33
CCSER2-208ENST00000494586 TBX22Q9Y458 520 aa12.97□□□□□ -0.33
CCSER2-208ENST00000494586 MED14O60244 1454 aa12.97□□□□□ -0.33
CCSER2-208ENST00000494586 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
CCSER2-208ENST00000494586 RALGAPBQ86X10 1494 aa12.96□□□□□ -0.34
CCSER2-208ENST00000494586 SCAF11Q99590 1463 aaKnown RBP12.96□□□□□ -0.34
CCSER2-208ENST00000494586 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
CCSER2-208ENST00000494586 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
CCSER2-208ENST00000494586 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
CCSER2-208ENST00000494586 SETBP1Q9Y6X0 1596 aa12.94□□□□□ -0.34
CCSER2-208ENST00000494586 NUTM2DQ5VT03 806 aaPredicted RBP12.94□□□□□ -0.34
CCSER2-208ENST00000494586 SIRT1Q96EB6 747 aa12.94□□□□□ -0.34
CCSER2-208ENST00000494586 NBPF1Q3BBV0 1214 aa12.93□□□□□ -0.34
CCSER2-208ENST00000494586 PIK3R4Q99570 1358 aa12.93□□□□□ -0.34
CCSER2-208ENST00000494586 ADAMTS13Q76LX8 1427 aa12.92□□□□□ -0.34
CCSER2-208ENST00000494586 CARD11Q9BXL7 1154 aa12.92□□□□□ -0.34
CCSER2-208ENST00000494586 ROCK2O75116 1388 aaKnown RBP12.92□□□□□ -0.34
CCSER2-208ENST00000494586 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
CCSER2-208ENST00000494586 LAMC1P11047 1609 aa12.91□□□□□ -0.34
CCSER2-208ENST00000494586 TRPM1Q7Z4N2 1603 aa12.91□□□□□ -0.34
CCSER2-208ENST00000494586 ALKQ9UM73 1620 aa12.91□□□□□ -0.34
CCSER2-208ENST00000494586 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
CCSER2-208ENST00000494586 ADGRB1O14514 1584 aa12.9□□□□□ -0.35
CCSER2-208ENST00000494586 NPHP4O75161 1426 aaPredicted RBP12.89□□□□□ -0.35
CCSER2-208ENST00000494586 EIF4G2P78344 907 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCSER2-208ENST00000494586 ABCC11Q96J66 1382 aa12.89□□□□□ -0.35
CCSER2-208ENST00000494586 DIP2AQ14689 1571 aa12.89□□□□□ -0.35
CCSER2-208ENST00000494586 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
CCSER2-208ENST00000494586 NRXN3Q9Y4C0 1643 aa12.88□□□□□ -0.35
CCSER2-208ENST00000494586 METP08581 1390 aa12.87□□□□□ -0.35
CCSER2-208ENST00000494586 LRPPRCP42704 1394 aaKnown RBP12.87□□□□□ -0.35
CCSER2-208ENST00000494586 HSPA2P54652 639 aa12.87□□□□□ -0.35
CCSER2-208ENST00000494586 BCANQ96GW7 911 aa12.87□□□□□ -0.35
CCSER2-208ENST00000494586 TMEM132EQ6IEE7 984 aa12.86□□□□□ -0.35
CCSER2-208ENST00000494586 SLC26A8Q96RN1 970 aa12.85□□□□□ -0.35
CCSER2-208ENST00000494586 TECPR2O15040 1411 aa12.85□□□□□ -0.35
CCSER2-208ENST00000494586 YTHDC2Q9H6S0 1430 aaKnown RBP12.85□□□□□ -0.35
CCSER2-208ENST00000494586 EIF3AQ14152 1382 aaKnown RBP12.84□□□□□ -0.35
CCSER2-208ENST00000494586 USP47Q96K76 1375 aa12.84□□□□□ -0.35
CCSER2-208ENST00000494586 KCNA6P17658 529 aa12.84□□□□□ -0.35
CCSER2-208ENST00000494586 DLC1Q96QB1 1528 aa12.83□□□□□ -0.35
CCSER2-208ENST00000494586 SETD1AO15047 1707 aaKnown RBP12.83□□□□□ -0.36
CCSER2-208ENST00000494586 FAM135BQ49AJ0 1406 aa12.83□□□□□ -0.36
CCSER2-208ENST00000494586 AEBP2Q6ZN18 517 aaPredicted RBP12.83□□□□□ -0.36
CCSER2-208ENST00000494586 SBNO2Q9Y2G9 1366 aa12.82□□□□□ -0.36
CCSER2-208ENST00000494586 POLR1AO95602 1720 aaPredicted RBP12.82□□□□□ -0.36
CCSER2-208ENST00000494586 ST20-MTHFSA0A0A6YYL1 179 aa12.82□□□□□ -0.36
CCSER2-208ENST00000494586 HSPA5P11021 654 aaKnown RBP12.82□□□□□ -0.36
CCSER2-208ENST00000494586 AMOTL2Q9Y2J4 779 aa12.82□□□□□ -0.36
CCSER2-208ENST00000494586 ASXL1Q8IXJ9 1541 aa12.82□□□□□ -0.36
CCSER2-208ENST00000494586 IQGAP1P46940 1657 aa12.81□□□□□ -0.36
CCSER2-208ENST00000494586 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
CCSER2-208ENST00000494586 TESK2Q96S53 571 aa12.81□□□□□ -0.36
CCSER2-208ENST00000494586 TRAK1Q9UPV9 953 aa12.81□□□□□ -0.36
CCSER2-208ENST00000494586 STRCQ7RTU9 1775 aa12.81□□□□□ -0.36
CCSER2-208ENST00000494586 PTPRUQ92729 1446 aa12.8□□□□□ -0.36
CCSER2-208ENST00000494586 PTCH1Q13635 1447 aa12.79□□□□□ -0.36
CCSER2-208ENST00000494586 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
CCSER2-208ENST00000494586 CENPJQ9HC77 1338 aaPredicted RBP12.79□□□□□ -0.36
CCSER2-208ENST00000494586 NCOA3Q9Y6Q9 1424 aa12.79□□□□□ -0.36
CCSER2-208ENST00000494586 STK26Q9P289 416 aa12.78□□□□□ -0.36
CCSER2-208ENST00000494586 PRAM1Q96QH2 718 aa12.77□□□□□ -0.37
CCSER2-208ENST00000494586 TMF1P82094 1093 aa12.76□□□□□ -0.37
CCSER2-208ENST00000494586 CDCA8Q53HL2 280 aa12.76□□□□□ -0.37
CCSER2-208ENST00000494586 POGKQ9P215 609 aa12.76□□□□□ -0.37
CCSER2-208ENST00000494586 ROBO2Q9HCK4 1378 aa12.76□□□□□ -0.37
CCSER2-208ENST00000494586 CPS1P31327 1500 aa12.76□□□□□ -0.37
CCSER2-208ENST00000494586 KNDC1Q76NI1 1749 aa12.76□□□□□ -0.37
CCSER2-208ENST00000494586 CHD2O14647 1828 aaKnown RBP12.76□□□□□ -0.37
CCSER2-208ENST00000494586 SENP3Q9H4L4 574 aaPredicted RBP12.75□□□□□ -0.37
CCSER2-208ENST00000494586 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
CCSER2-208ENST00000494586 NWD1Q149M9 1564 aa12.74□□□□□ -0.37
CCSER2-208ENST00000494586 WAPLQ7Z5K2 1190 aa12.74□□□□□ -0.37
CCSER2-208ENST00000494586 NKTRP30414 1462 aaKnown RBP12.73□□□□□ -0.37
CCSER2-208ENST00000494586 EVC2Q86UK5 1308 aa12.72□□□□□ -0.37
CCSER2-208ENST00000494586 ARHGEF28Q8N1W1 1705 aaKnown RBP12.71□□□□□ -0.37
CCSER2-208ENST00000494586 C11orf95C9JLR9 678 aaPredicted RBP12.71□□□□□ -0.37
CCSER2-208ENST00000494586 HIRIP3Q9BW71 556 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms