RNA–Protein interactions for RNA: ENST00000494568.5

PLSCR1-219, Transcript of phospholipid scramblase 1, humanhuman

TSL 2

Gene PLSCR1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-219ENST00000494568 TMEM94Q12767 1356 aa18.72■□□□□ 0.59
PLSCR1-219ENST00000494568 TET3O43151 1660 aa18.72■□□□□ 0.59
PLSCR1-219ENST00000494568 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.71■□□□□ 0.59
PLSCR1-219ENST00000494568 RBM33Q96EV2 1170 aaKnown RBP18.71■□□□□ 0.59
PLSCR1-219ENST00000494568 RIMS2Q9UQ26 1411 aa18.71■□□□□ 0.59
PLSCR1-219ENST00000494568 UNC13BO14795 1591 aa18.71■□□□□ 0.59
PLSCR1-219ENST00000494568 PLEKHG1Q9ULL1 1385 aa18.69■□□□□ 0.58
PLSCR1-219ENST00000494568 ZFYVE9O95405 1425 aa18.69■□□□□ 0.58
PLSCR1-219ENST00000494568 NUTM2DQ5VT03 806 aaPredicted RBP18.68■□□□□ 0.58
PLSCR1-219ENST00000494568 TBX22Q9Y458 520 aa18.67■□□□□ 0.58
PLSCR1-219ENST00000494568 GCC2Q8IWJ2 1684 aa18.65■□□□□ 0.58
PLSCR1-219ENST00000494568 TMEM131LA2VDJ0 1609 aa18.64■□□□□ 0.57
PLSCR1-219ENST00000494568 PHF23Q9BUL5 403 aaPredicted RBP18.64■□□□□ 0.57
PLSCR1-219ENST00000494568 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
PLSCR1-219ENST00000494568 FAM135BQ49AJ0 1406 aa18.63■□□□□ 0.57
PLSCR1-219ENST00000494568 E9PCH4 1651 aa18.63■□□□□ 0.57
PLSCR1-219ENST00000494568 RRBP1Q9P2E9 1410 aaKnown RBP18.62■□□□□ 0.57
PLSCR1-219ENST00000494568 NKTRP30414 1462 aaKnown RBP18.62■□□□□ 0.57
PLSCR1-219ENST00000494568 MED1Q15648 1581 aaPredicted RBP18.62■□□□□ 0.57
PLSCR1-219ENST00000494568 MSH6P52701 1360 aa18.61■□□□□ 0.57
PLSCR1-219ENST00000494568 XIRP1Q702N8 1843 aaKnown RBP18.59■□□□□ 0.57
PLSCR1-219ENST00000494568 SLAIN2Q9P270 581 aa18.59■□□□□ 0.57
PLSCR1-219ENST00000494568 ZNF326Q5BKZ1 582 aaKnown RBP18.58■□□□□ 0.56
PLSCR1-219ENST00000494568 C14orf37Q86TY3 774 aa18.58■□□□□ 0.56
PLSCR1-219ENST00000494568 NWD1Q149M9 1564 aa18.58■□□□□ 0.56
PLSCR1-219ENST00000494568 MYO5BQ9ULV0 1848 aa18.58■□□□□ 0.56
PLSCR1-219ENST00000494568 ADAMTS13Q76LX8 1427 aa18.57■□□□□ 0.56
PLSCR1-219ENST00000494568 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
PLSCR1-219ENST00000494568 NAIPQ13075 1403 aa18.56■□□□□ 0.56
PLSCR1-219ENST00000494568 PIK3R4Q99570 1358 aa18.55■□□□□ 0.56
PLSCR1-219ENST00000494568 AMOTL2Q9Y2J4 779 aa18.55■□□□□ 0.56
PLSCR1-219ENST00000494568 C19orf44Q9H6X5 657 aa18.53■□□□□ 0.56
PLSCR1-219ENST00000494568 NCOA3Q9Y6Q9 1424 aa18.53■□□□□ 0.56
PLSCR1-219ENST00000494568 ATF3P18847 181 aa18.51■□□□□ 0.55
PLSCR1-219ENST00000494568 CADPS2Q86UW7 1296 aa18.51■□□□□ 0.55
PLSCR1-219ENST00000494568 CHD2O14647 1828 aaKnown RBP18.51■□□□□ 0.55
PLSCR1-219ENST00000494568 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
PLSCR1-219ENST00000494568 DIP2AQ14689 1571 aa18.49■□□□□ 0.55
PLSCR1-219ENST00000494568 HFM1A2PYH4 1435 aa18.49■□□□□ 0.55
PLSCR1-219ENST00000494568 RGS17Q9UGC6 210 aaPredicted RBP18.48■□□□□ 0.55
PLSCR1-219ENST00000494568 PTPRUQ92729 1446 aa18.48■□□□□ 0.55
PLSCR1-219ENST00000494568 ROBO1Q9Y6N7 1651 aa18.47■□□□□ 0.55
PLSCR1-219ENST00000494568 TRPM2O94759 1503 aa18.47■□□□□ 0.55
PLSCR1-219ENST00000494568 SPHKAPQ2M3C7 1700 aa18.46■□□□□ 0.55
PLSCR1-219ENST00000494568 METP08581 1390 aa18.44■□□□□ 0.54
PLSCR1-219ENST00000494568 VGFO15240 615 aaPredicted RBP18.43■□□□□ 0.54
PLSCR1-219ENST00000494568 JCADQ9P266 1359 aa18.42■□□□□ 0.54
PLSCR1-219ENST00000494568 SETBP1Q9Y6X0 1596 aa18.42■□□□□ 0.54
PLSCR1-219ENST00000494568 CLTCL1P53675 1640 aa18.41■□□□□ 0.54
PLSCR1-219ENST00000494568 FOXD1Q16676 465 aa18.4■□□□□ 0.54
PLSCR1-219ENST00000494568 RPGRIP1LQ68CZ1 1315 aa18.4■□□□□ 0.54
PLSCR1-219ENST00000494568 BRINP3Q76B58 766 aa18.39■□□□□ 0.53
PLSCR1-219ENST00000494568 NEXMIFQ5QGS0 1516 aa18.39■□□□□ 0.53
PLSCR1-219ENST00000494568 NRXN3Q9Y4C0 1643 aa18.38■□□□□ 0.53
PLSCR1-219ENST00000494568 POTEAQ6S8J7 498 aa18.38■□□□□ 0.53
PLSCR1-219ENST00000494568 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.37■□□□□ 0.53
PLSCR1-219ENST00000494568 PHLPP1O60346 1717 aa18.36■□□□□ 0.53
PLSCR1-219ENST00000494568 DCCP43146 1447 aa18.36■□□□□ 0.53
PLSCR1-219ENST00000494568 MPHOSPH9Q99550 1183 aa18.36■□□□□ 0.53
PLSCR1-219ENST00000494568 SPATA31A6Q5VVP1 1343 aa18.34■□□□□ 0.53
PLSCR1-219ENST00000494568 XRN1Q8IZH2 1706 aaKnown RBP18.33■□□□□ 0.52
PLSCR1-219ENST00000494568 MEX3CQ5U5Q3 659 aaKnown RBP18.33■□□□□ 0.52
PLSCR1-219ENST00000494568 KIF1BO60333 1816 aa18.33■□□□□ 0.52
PLSCR1-219ENST00000494568 RGL3Q3MIN7 710 aa18.32■□□□□ 0.52
PLSCR1-219ENST00000494568 MST1RQ04912 1400 aa18.32■□□□□ 0.52
PLSCR1-219ENST00000494568 COL16A1Q07092 1604 aaPredicted RBP18.31■□□□□ 0.52
PLSCR1-219ENST00000494568 ADGRL3Q9HAR2 1447 aa18.31■□□□□ 0.52
PLSCR1-219ENST00000494568 CCDC144AA2RUR9 1427 aa18.3■□□□□ 0.52
PLSCR1-219ENST00000494568 AHDC1Q5TGY3 1603 aaPredicted RBP18.3■□□□□ 0.52
PLSCR1-219ENST00000494568 ROBO2Q9HCK4 1378 aa18.3■□□□□ 0.52
PLSCR1-219ENST00000494568 NUTM2BA6NNL0 878 aaPredicted RBP18.28■□□□□ 0.52
PLSCR1-219ENST00000494568 NUTM2EB1AL46 878 aaPredicted RBP18.28■□□□□ 0.52
PLSCR1-219ENST00000494568 NUTM2AQ8IVF1 878 aaPredicted RBP18.28■□□□□ 0.52
PLSCR1-219ENST00000494568 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
PLSCR1-219ENST00000494568 LRRC59Q96AG4 307 aaKnown RBP18.28■□□□□ 0.52
PLSCR1-219ENST00000494568 ADGRF5Q8IZF2 1346 aa18.27■□□□□ 0.52
PLSCR1-219ENST00000494568 ACIN1Q9UKV3 1341 aaKnown RBP18.27■□□□□ 0.52
PLSCR1-219ENST00000494568 PTCH1Q13635 1447 aa18.27■□□□□ 0.52
PLSCR1-219ENST00000494568 ASXL1Q8IXJ9 1541 aa18.27■□□□□ 0.51
PLSCR1-219ENST00000494568 ZNF772Q68DY9 489 aaPredicted RBP18.26■□□□□ 0.51
PLSCR1-219ENST00000494568 LRP6O75581 1613 aa18.25■□□□□ 0.51
PLSCR1-219ENST00000494568 SETD5Q9C0A6 1442 aa18.24■□□□□ 0.51
PLSCR1-219ENST00000494568 ANKRD30BQ9BXX2 1392 aa18.24■□□□□ 0.51
PLSCR1-219ENST00000494568 SPATA31E1Q6ZUB1 1445 aa18.23■□□□□ 0.51
PLSCR1-219ENST00000494568 C1orf167Q5SNV9 1468 aa18.23■□□□□ 0.51
PLSCR1-219ENST00000494568 ORAI2Q96SN7 254 aa18.23■□□□□ 0.51
PLSCR1-219ENST00000494568 STK26Q9P289 416 aa18.23■□□□□ 0.51
PLSCR1-219ENST00000494568 PRAG1Q86YV5 1406 aa18.21■□□□□ 0.51
PLSCR1-219ENST00000494568 TMEM132EQ6IEE7 984 aa18.2■□□□□ 0.5
PLSCR1-219ENST00000494568 WAPLQ7Z5K2 1190 aa18.19■□□□□ 0.5
PLSCR1-219ENST00000494568 PPLO60437 1756 aa18.19■□□□□ 0.5
PLSCR1-219ENST00000494568 SHPRHQ149N8 1683 aa18.18■□□□□ 0.5
PLSCR1-219ENST00000494568 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
PLSCR1-219ENST00000494568 NALCNQ8IZF0 1738 aa18.18■□□□□ 0.5
PLSCR1-219ENST00000494568 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
PLSCR1-219ENST00000494568 PNPLA6Q8IY17 1366 aa18.17■□□□□ 0.5
PLSCR1-219ENST00000494568 ESCO1Q5FWF5 840 aa18.17■□□□□ 0.5
PLSCR1-219ENST00000494568 SOS2Q07890 1332 aaPredicted RBP18.17■□□□□ 0.5
PLSCR1-219ENST00000494568 RXRBP28702 533 aa18.16■□□□□ 0.5
PLSCR1-219ENST00000494568 C8orf37Q96NL8 207 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms