RNA–Protein interactions for RNA: ENST00000494317.1

LCN2-207, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 625 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-207ENST00000494317 RIMS2Q9UQ26 1411 aa34.81■■■■□ 3.16
LCN2-207ENST00000494317 CHGAP10645 457 aaKnown RBP34.79■■■■□ 3.16
LCN2-207ENST00000494317 KCNA6P17658 529 aa34.79■■■■□ 3.16
LCN2-207ENST00000494317 BCANQ96GW7 911 aa34.79■■■■□ 3.16
LCN2-207ENST00000494317 XIRP1Q702N8 1843 aaKnown RBP34.77■■■■□ 3.16
LCN2-207ENST00000494317 ILDR2Q71H61 639 aa34.77■■■■□ 3.16
LCN2-207ENST00000494317 SENP3Q9H4L4 574 aaPredicted RBP34.77■■■■□ 3.16
LCN2-207ENST00000494317 PLEKHG1Q9ULL1 1385 aa34.76■■■■□ 3.16
LCN2-207ENST00000494317 PPP1R15AO75807 674 aaPredicted RBP34.76■■■■□ 3.16
LCN2-207ENST00000494317 HDGFP51858 240 aaKnown RBP34.75■■■■□ 3.15
LCN2-207ENST00000494317 TMEM94Q12767 1356 aa34.73■■■■□ 3.15
LCN2-207ENST00000494317 NWD1Q149M9 1564 aa34.7■■■■□ 3.15
LCN2-207ENST00000494317 NAIPQ13075 1403 aa34.7■■■■□ 3.15
LCN2-207ENST00000494317 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.69■■■■□ 3.14
LCN2-207ENST00000494317 PROSER2Q86WR7 435 aaPredicted RBP34.68■■■■□ 3.14
LCN2-207ENST00000494317 NKTRP30414 1462 aaKnown RBP34.67■■■■□ 3.14
LCN2-207ENST00000494317 NUTM2DQ5VT03 806 aaPredicted RBP34.66■■■■□ 3.14
LCN2-207ENST00000494317 RBM33Q96EV2 1170 aaKnown RBP34.65■■■■□ 3.14
LCN2-207ENST00000494317 SPHKAPQ2M3C7 1700 aa34.63■■■■□ 3.13
LCN2-207ENST00000494317 TBX22Q9Y458 520 aa34.61■■■■□ 3.13
LCN2-207ENST00000494317 MED1Q15648 1581 aaPredicted RBP34.6■■■■□ 3.13
LCN2-207ENST00000494317 ADAMTS13Q76LX8 1427 aa34.59■■■■□ 3.13
LCN2-207ENST00000494317 CHD2O14647 1828 aaKnown RBP34.58■■■■□ 3.13
LCN2-207ENST00000494317 HFM1A2PYH4 1435 aa34.57■■■■□ 3.13
LCN2-207ENST00000494317 DIP2AQ14689 1571 aa34.54■■■■□ 3.12
LCN2-207ENST00000494317 FAM135BQ49AJ0 1406 aa34.53■■■■□ 3.12
LCN2-207ENST00000494317 MSH6P52701 1360 aa34.51■■■■□ 3.12
LCN2-207ENST00000494317 TRPM2O94759 1503 aa34.5■■■■□ 3.11
LCN2-207ENST00000494317 TRIM52Q96A61 297 aa34.5■■■■□ 3.11
LCN2-207ENST00000494317 SOCS7O14512 581 aa34.49■■■■□ 3.11
LCN2-207ENST00000494317 PIK3R4Q99570 1358 aa34.49■■■■□ 3.11
LCN2-207ENST00000494317 CLTCL1P53675 1640 aa34.48■■■■□ 3.11
LCN2-207ENST00000494317 ZNF326Q5BKZ1 582 aaKnown RBP34.48■■■■□ 3.11
LCN2-207ENST00000494317 ROBO1Q9Y6N7 1651 aa34.44■■■■□ 3.1
LCN2-207ENST00000494317 NRXN3Q9Y4C0 1643 aa34.41■■■■□ 3.1
LCN2-207ENST00000494317 NCOA3Q9Y6Q9 1424 aa34.41■■■■□ 3.1
LCN2-207ENST00000494317 SETBP1Q9Y6X0 1596 aa34.4■■■■□ 3.1
LCN2-207ENST00000494317 PTPRUQ92729 1446 aa34.39■■■■□ 3.1
LCN2-207ENST00000494317 SLC4A1APQ9BWU0 796 aaKnown RBP34.39■■■■□ 3.1
LCN2-207ENST00000494317 C14orf37Q86TY3 774 aa34.38■■■■□ 3.09
LCN2-207ENST00000494317 SLAIN2Q9P270 581 aa34.38■■■■□ 3.09
LCN2-207ENST00000494317 AMOTL2Q9Y2J4 779 aa34.38■■■■□ 3.09
LCN2-207ENST00000494317 NEXMIFQ5QGS0 1516 aa34.38■■■■□ 3.09
LCN2-207ENST00000494317 PHF23Q9BUL5 403 aaPredicted RBP34.36■■■■□ 3.09
LCN2-207ENST00000494317 KIF1BO60333 1816 aa34.35■■■■□ 3.09
LCN2-207ENST00000494317 C19orf44Q9H6X5 657 aa34.3■■■■□ 3.08
LCN2-207ENST00000494317 METP08581 1390 aa34.3■■■■□ 3.08
LCN2-207ENST00000494317 XRN1Q8IZH2 1706 aaKnown RBP34.3■■■■□ 3.08
LCN2-207ENST00000494317 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.28■■■■□ 3.08
LCN2-207ENST00000494317 CADPS2Q86UW7 1296 aa34.26■■■■□ 3.08
LCN2-207ENST00000494317 ATF3P18847 181 aa34.25■■■■□ 3.07
LCN2-207ENST00000494317 FOXD1Q16676 465 aa34.24■■■■□ 3.07
LCN2-207ENST00000494317 PHLPP1O60346 1717 aa34.21■■■■□ 3.07
LCN2-207ENST00000494317 VGFO15240 615 aaPredicted RBP34.2■■■■□ 3.07
LCN2-207ENST00000494317 RPGRIP1LQ68CZ1 1315 aa34.19■■■■□ 3.06
LCN2-207ENST00000494317 DCCP43146 1447 aa34.16■■■■□ 3.06
LCN2-207ENST00000494317 MPHOSPH9Q99550 1183 aa34.16■■■■□ 3.06
LCN2-207ENST00000494317 COL16A1Q07092 1604 aaPredicted RBP34.14■■■■□ 3.06
LCN2-207ENST00000494317 RGS17Q9UGC6 210 aaPredicted RBP34.13■■■■□ 3.05
LCN2-207ENST00000494317 CCDC144AA2RUR9 1427 aa34.13■■■■□ 3.05
LCN2-207ENST00000494317 JCADQ9P266 1359 aa34.12■■■■□ 3.05
LCN2-207ENST00000494317 PPLO60437 1756 aa34.11■■■■□ 3.05
LCN2-207ENST00000494317 SETD1AO15047 1707 aaKnown RBP34.11■■■■□ 3.05
LCN2-207ENST00000494317 AHDC1Q5TGY3 1603 aaPredicted RBP34.09■■■■□ 3.05
LCN2-207ENST00000494317 ADGRL3Q9HAR2 1447 aa34.09■■■■□ 3.05
LCN2-207ENST00000494317 BRINP3Q76B58 766 aa34.08■■■■□ 3.05
LCN2-207ENST00000494317 SETD5Q9C0A6 1442 aa34.07■■■■□ 3.04
LCN2-207ENST00000494317 MST1RQ04912 1400 aa34.06■■■■□ 3.04
LCN2-207ENST00000494317 PTCH1Q13635 1447 aa34.05■■■■□ 3.04
LCN2-207ENST00000494317 SPATA31E1Q6ZUB1 1445 aa34.04■■■■□ 3.04
LCN2-207ENST00000494317 NALCNQ8IZF0 1738 aa34.04■■■■□ 3.04
LCN2-207ENST00000494317 ROBO2Q9HCK4 1378 aa34.02■■■■□ 3.04
LCN2-207ENST00000494317 RGL3Q3MIN7 710 aa34.02■■■■□ 3.04
LCN2-207ENST00000494317 ASXL1Q8IXJ9 1541 aa34.02■■■■□ 3.04
LCN2-207ENST00000494317 ACIN1Q9UKV3 1341 aaKnown RBP34.02■■■■□ 3.04
LCN2-207ENST00000494317 PRAG1Q86YV5 1406 aa34■■■■□ 3.03
LCN2-207ENST00000494317 ADGRF5Q8IZF2 1346 aa34■■■■□ 3.03
LCN2-207ENST00000494317 POTEAQ6S8J7 498 aa33.95■■■■□ 3.03
LCN2-207ENST00000494317 SPATA31A6Q5VVP1 1343 aa33.95■■■■□ 3.03
LCN2-207ENST00000494317 ANKRD30BQ9BXX2 1392 aa33.95■■■■□ 3.02
LCN2-207ENST00000494317 RAB3GAP2Q9H2M9 1393 aa33.95■■■■□ 3.02
LCN2-207ENST00000494317 IFT172Q9UG01 1749 aa33.94■■■■□ 3.02
LCN2-207ENST00000494317 LRP6O75581 1613 aa33.93■■■■□ 3.02
LCN2-207ENST00000494317 SHPRHQ149N8 1683 aa33.93■■■■□ 3.02
LCN2-207ENST00000494317 NHSL1Q5SYE7 1610 aa33.91■■■■□ 3.02
LCN2-207ENST00000494317 C1orf167Q5SNV9 1468 aa33.89■■■■□ 3.02
LCN2-207ENST00000494317 DDX17Q92841 729 aaKnown RBP33.86■■■■□ 3.01
LCN2-207ENST00000494317 PIK3C2GO75747 1445 aa33.86■■■■□ 3.01
LCN2-207ENST00000494317 MEX3CQ5U5Q3 659 aaKnown RBP33.84■■■■□ 3.01
LCN2-207ENST00000494317 STK26Q9P289 416 aa33.83■■■■□ 3.01
LCN2-207ENST00000494317 LRPPRCP42704 1394 aaKnown RBP33.82■■■■□ 3
LCN2-207ENST00000494317 TMEM132EQ6IEE7 984 aa33.81■■■■□ 3
LCN2-207ENST00000494317 LRRC59Q96AG4 307 aaKnown RBP33.81■■■■□ 3
LCN2-207ENST00000494317 TECPR2O15040 1411 aa33.8■■■■□ 3
LCN2-207ENST00000494317 ORAI2Q96SN7 254 aa33.8■■■■□ 3
LCN2-207ENST00000494317 NUTM2BA6NNL0 878 aaPredicted RBP33.79■■■■□ 3
LCN2-207ENST00000494317 NUTM2EB1AL46 878 aaPredicted RBP33.79■■■■□ 3
LCN2-207ENST00000494317 NUTM2AQ8IVF1 878 aaPredicted RBP33.79■■■■□ 3
LCN2-207ENST00000494317 CDC42BPGQ6DT37 1551 aa33.77■■■■□ 3
LCN2-207ENST00000494317 ABCC11Q96J66 1382 aa33.76■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms