RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 XIRP1Q702N8 1843 aaKnown RBP36.05■■■■□ 3.36
RHBDD3-206ENST00000493894 RIMS2Q9UQ26 1411 aa36.05■■■■□ 3.36
RHBDD3-206ENST00000493894 BCANQ96GW7 911 aa36.03■■■■□ 3.36
RHBDD3-206ENST00000493894 PPP1R15AO75807 674 aaPredicted RBP36.02■■■■□ 3.36
RHBDD3-206ENST00000493894 PLEKHG1Q9ULL1 1385 aa36.02■■■■□ 3.36
RHBDD3-206ENST00000493894 KCNA6P17658 529 aa36.01■■■■□ 3.36
RHBDD3-206ENST00000493894 HDGFP51858 240 aaKnown RBP36.01■■■■□ 3.36
RHBDD3-206ENST00000493894 NWD1Q149M9 1564 aa36.01■■■■□ 3.35
RHBDD3-206ENST00000493894 CHGAP10645 457 aaKnown RBP36■■■■□ 3.35
RHBDD3-206ENST00000493894 NKTRP30414 1462 aaKnown RBP35.99■■■■□ 3.35
RHBDD3-206ENST00000493894 ILDR2Q71H61 639 aa35.97■■■■□ 3.35
RHBDD3-206ENST00000493894 TMEM94Q12767 1356 aa35.97■■■■□ 3.35
RHBDD3-206ENST00000493894 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.94■■■■□ 3.34
RHBDD3-206ENST00000493894 SPHKAPQ2M3C7 1700 aa35.93■■■■□ 3.34
RHBDD3-206ENST00000493894 MED1Q15648 1581 aaPredicted RBP35.91■■■■□ 3.34
RHBDD3-206ENST00000493894 SENP3Q9H4L4 574 aaPredicted RBP35.91■■■■□ 3.34
RHBDD3-206ENST00000493894 NAIPQ13075 1403 aa35.91■■■■□ 3.34
RHBDD3-206ENST00000493894 PROSER2Q86WR7 435 aaPredicted RBP35.89■■■■□ 3.34
RHBDD3-206ENST00000493894 DIP2AQ14689 1571 aa35.86■■■■□ 3.33
RHBDD3-206ENST00000493894 CHD2O14647 1828 aaKnown RBP35.85■■■■□ 3.33
RHBDD3-206ENST00000493894 NUTM2DQ5VT03 806 aaPredicted RBP35.82■■■■□ 3.32
RHBDD3-206ENST00000493894 TBX22Q9Y458 520 aa35.82■■■■□ 3.32
RHBDD3-206ENST00000493894 HFM1A2PYH4 1435 aa35.82■■■■□ 3.32
RHBDD3-206ENST00000493894 ADAMTS13Q76LX8 1427 aa35.82■■■■□ 3.32
RHBDD3-206ENST00000493894 RBM33Q96EV2 1170 aaKnown RBP35.81■■■■□ 3.32
RHBDD3-206ENST00000493894 MSH6P52701 1360 aa35.78■■■■□ 3.32
RHBDD3-206ENST00000493894 FAM135BQ49AJ0 1406 aa35.78■■■■□ 3.32
RHBDD3-206ENST00000493894 TRPM2O94759 1503 aa35.78■■■■□ 3.32
RHBDD3-206ENST00000493894 CLTCL1P53675 1640 aa35.75■■■■□ 3.31
RHBDD3-206ENST00000493894 PIK3R4Q99570 1358 aa35.75■■■■□ 3.31
RHBDD3-206ENST00000493894 SOCS7O14512 581 aa35.74■■■■□ 3.31
RHBDD3-206ENST00000493894 ROBO1Q9Y6N7 1651 aa35.72■■■■□ 3.31
RHBDD3-206ENST00000493894 ZNF326Q5BKZ1 582 aaKnown RBP35.7■■■■□ 3.31
RHBDD3-206ENST00000493894 NCOA3Q9Y6Q9 1424 aa35.68■■■■□ 3.3
RHBDD3-206ENST00000493894 TRIM52Q96A61 297 aa35.68■■■■□ 3.3
RHBDD3-206ENST00000493894 SETBP1Q9Y6X0 1596 aa35.68■■■■□ 3.3
RHBDD3-206ENST00000493894 NRXN3Q9Y4C0 1643 aa35.67■■■■□ 3.3
RHBDD3-206ENST00000493894 KIF1BO60333 1816 aa35.64■■■■□ 3.3
RHBDD3-206ENST00000493894 PHF23Q9BUL5 403 aaPredicted RBP35.64■■■■□ 3.3
RHBDD3-206ENST00000493894 NEXMIFQ5QGS0 1516 aa35.62■■■■□ 3.29
RHBDD3-206ENST00000493894 C14orf37Q86TY3 774 aa35.62■■■■□ 3.29
RHBDD3-206ENST00000493894 PTPRUQ92729 1446 aa35.59■■■■□ 3.29
RHBDD3-206ENST00000493894 SLC4A1APQ9BWU0 796 aaKnown RBP35.59■■■■□ 3.29
RHBDD3-206ENST00000493894 SLAIN2Q9P270 581 aa35.59■■■■□ 3.29
RHBDD3-206ENST00000493894 XRN1Q8IZH2 1706 aaKnown RBP35.57■■■■□ 3.29
RHBDD3-206ENST00000493894 AMOTL2Q9Y2J4 779 aa35.57■■■■□ 3.28
RHBDD3-206ENST00000493894 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.54■■■■□ 3.28
RHBDD3-206ENST00000493894 C19orf44Q9H6X5 657 aa35.51■■■■□ 3.28
RHBDD3-206ENST00000493894 PHLPP1O60346 1717 aa35.51■■■■□ 3.27
RHBDD3-206ENST00000493894 CADPS2Q86UW7 1296 aa35.5■■■■□ 3.27
RHBDD3-206ENST00000493894 METP08581 1390 aa35.49■■■■□ 3.27
RHBDD3-206ENST00000493894 ATF3P18847 181 aa35.48■■■■□ 3.27
RHBDD3-206ENST00000493894 DCCP43146 1447 aa35.45■■■■□ 3.27
RHBDD3-206ENST00000493894 VGFO15240 615 aaPredicted RBP35.41■■■■□ 3.26
RHBDD3-206ENST00000493894 COL16A1Q07092 1604 aaPredicted RBP35.41■■■■□ 3.26
RHBDD3-206ENST00000493894 RPGRIP1LQ68CZ1 1315 aa35.4■■■■□ 3.26
RHBDD3-206ENST00000493894 PPLO60437 1756 aa35.39■■■■□ 3.26
RHBDD3-206ENST00000493894 JCADQ9P266 1359 aa35.38■■■■□ 3.25
RHBDD3-206ENST00000493894 AHDC1Q5TGY3 1603 aaPredicted RBP35.37■■■■□ 3.25
RHBDD3-206ENST00000493894 FOXD1Q16676 465 aa35.37■■■■□ 3.25
RHBDD3-206ENST00000493894 SETD1AO15047 1707 aaKnown RBP35.37■■■■□ 3.25
RHBDD3-206ENST00000493894 CCDC144AA2RUR9 1427 aa35.36■■■■□ 3.25
RHBDD3-206ENST00000493894 ADGRL3Q9HAR2 1447 aa35.34■■■■□ 3.25
RHBDD3-206ENST00000493894 MPHOSPH9Q99550 1183 aa35.32■■■■□ 3.24
RHBDD3-206ENST00000493894 NALCNQ8IZF0 1738 aa35.32■■■■□ 3.24
RHBDD3-206ENST00000493894 PTCH1Q13635 1447 aa35.31■■■■□ 3.24
RHBDD3-206ENST00000493894 RGS17Q9UGC6 210 aaPredicted RBP35.3■■■■□ 3.24
RHBDD3-206ENST00000493894 MST1RQ04912 1400 aa35.3■■■■□ 3.24
RHBDD3-206ENST00000493894 ACIN1Q9UKV3 1341 aaKnown RBP35.29■■■■□ 3.24
RHBDD3-206ENST00000493894 ASXL1Q8IXJ9 1541 aa35.28■■■■□ 3.24
RHBDD3-206ENST00000493894 BRINP3Q76B58 766 aa35.28■■■■□ 3.24
RHBDD3-206ENST00000493894 PRAG1Q86YV5 1406 aa35.25■■■■□ 3.23
RHBDD3-206ENST00000493894 SETD5Q9C0A6 1442 aa35.25■■■■□ 3.23
RHBDD3-206ENST00000493894 SPATA31E1Q6ZUB1 1445 aa35.23■■■■□ 3.23
RHBDD3-206ENST00000493894 SHPRHQ149N8 1683 aa35.22■■■■□ 3.23
RHBDD3-206ENST00000493894 ROBO2Q9HCK4 1378 aa35.21■■■■□ 3.23
RHBDD3-206ENST00000493894 IFT172Q9UG01 1749 aa35.2■■■■□ 3.23
RHBDD3-206ENST00000493894 SPATA31A6Q5VVP1 1343 aa35.2■■■■□ 3.23
RHBDD3-206ENST00000493894 NHSL1Q5SYE7 1610 aa35.19■■■■□ 3.22
RHBDD3-206ENST00000493894 ANKRD30BQ9BXX2 1392 aa35.18■■■■□ 3.22
RHBDD3-206ENST00000493894 RGL3Q3MIN7 710 aa35.17■■■■□ 3.22
RHBDD3-206ENST00000493894 ADGRF5Q8IZF2 1346 aa35.15■■■■□ 3.22
RHBDD3-206ENST00000493894 LRP6O75581 1613 aa35.15■■■■□ 3.22
RHBDD3-206ENST00000493894 RAB3GAP2Q9H2M9 1393 aa35.13■■■■□ 3.21
RHBDD3-206ENST00000493894 POTEAQ6S8J7 498 aa35.12■■■■□ 3.21
RHBDD3-206ENST00000493894 C1orf167Q5SNV9 1468 aa35.11■■■■□ 3.21
RHBDD3-206ENST00000493894 PIK3C2GO75747 1445 aa35.08■■■■□ 3.21
RHBDD3-206ENST00000493894 MEX3CQ5U5Q3 659 aaKnown RBP35.08■■■■□ 3.21
RHBDD3-206ENST00000493894 TECPR2O15040 1411 aa35.04■■■■□ 3.2
RHBDD3-206ENST00000493894 CDC42BPGQ6DT37 1551 aa35.04■■■■□ 3.2
RHBDD3-206ENST00000493894 KNDC1Q76NI1 1749 aa35.02■■■■□ 3.2
RHBDD3-206ENST00000493894 LRRC59Q96AG4 307 aaKnown RBP35.02■■■■□ 3.2
RHBDD3-206ENST00000493894 LRPPRCP42704 1394 aaKnown RBP35.01■■■■□ 3.2
RHBDD3-206ENST00000493894 LAMC1P11047 1609 aa35.01■■■■□ 3.19
RHBDD3-206ENST00000493894 DDX17Q92841 729 aaKnown RBP35■■■■□ 3.19
RHBDD3-206ENST00000493894 MYOM2P54296 1465 aa34.98■■■■□ 3.19
RHBDD3-206ENST00000493894 NUTM2BA6NNL0 878 aaPredicted RBP34.97■■■■□ 3.19
RHBDD3-206ENST00000493894 NUTM2EB1AL46 878 aaPredicted RBP34.97■■■■□ 3.19
RHBDD3-206ENST00000493894 NUTM2AQ8IVF1 878 aaPredicted RBP34.97■■■■□ 3.19
RHBDD3-206ENST00000493894 STK26Q9P289 416 aa34.97■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms