RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 EID1Q9Y6B2 187 aa26.08■■□□□ 1.77
PDLIM7-208ENST00000493815 SPATA31E1Q6ZUB1 1445 aa26.08■■□□□ 1.77
PDLIM7-208ENST00000493815 ZFYVE9O95405 1425 aa26.07■■□□□ 1.76
PDLIM7-208ENST00000493815 SCAF11Q99590 1463 aaKnown RBP26.06■■□□□ 1.76
PDLIM7-208ENST00000493815 NEUROD1Q13562 356 aa26.06■■□□□ 1.76
PDLIM7-208ENST00000493815 PPP1R15AO75807 674 aaPredicted RBP26.04■■□□□ 1.76
PDLIM7-208ENST00000493815 NEURL4Q96JN8 1562 aa26.03■■□□□ 1.76
PDLIM7-208ENST00000493815 POLR1AO95602 1720 aaPredicted RBP26.01■■□□□ 1.75
PDLIM7-208ENST00000493815 NEXMIFQ5QGS0 1516 aa26■■□□□ 1.75
PDLIM7-208ENST00000493815 CCER1Q8TC90 406 aaPredicted RBP26■■□□□ 1.75
PDLIM7-208ENST00000493815 NPHP4O75161 1426 aaPredicted RBP26■■□□□ 1.75
PDLIM7-208ENST00000493815 HDGFP51858 240 aaKnown RBP25.99■■□□□ 1.75
PDLIM7-208ENST00000493815 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.99■■□□□ 1.75
PDLIM7-208ENST00000493815 BCANQ96GW7 911 aa25.99■■□□□ 1.75
PDLIM7-208ENST00000493815 RPGRIP1LQ68CZ1 1315 aa25.97■■□□□ 1.75
PDLIM7-208ENST00000493815 MED14O60244 1454 aa25.96■■□□□ 1.75
PDLIM7-208ENST00000493815 DMRT2Q9Y5R5 561 aa25.96■■□□□ 1.75
PDLIM7-208ENST00000493815 SLC26A8Q96RN1 970 aa25.94■■□□□ 1.74
PDLIM7-208ENST00000493815 KDM2AQ9Y2K7 1162 aa25.93■■□□□ 1.74
PDLIM7-208ENST00000493815 PLEKHG1Q9ULL1 1385 aa25.93■■□□□ 1.74
PDLIM7-208ENST00000493815 ADGRF5Q8IZF2 1346 aa25.93■■□□□ 1.74
PDLIM7-208ENST00000493815 IQGAP1P46940 1657 aa25.93■■□□□ 1.74
PDLIM7-208ENST00000493815 VGFO15240 615 aaPredicted RBP25.93■■□□□ 1.74
PDLIM7-208ENST00000493815 DCAF11Q8TEB1 546 aa25.93■■□□□ 1.74
PDLIM7-208ENST00000493815 PPLO60437 1756 aa25.92■■□□□ 1.74
PDLIM7-208ENST00000493815 L3MBTL2Q969R5 705 aa25.88■■□□□ 1.73
PDLIM7-208ENST00000493815 IFT172Q9UG01 1749 aa25.88■■□□□ 1.73
PDLIM7-208ENST00000493815 ADAMTS13Q76LX8 1427 aa25.85■■□□□ 1.73
PDLIM7-208ENST00000493815 CLSPNQ9HAW4 1339 aa25.84■■□□□ 1.73
PDLIM7-208ENST00000493815 ZNF335Q9H4Z2 1342 aaPredicted RBP25.83■■□□□ 1.73
PDLIM7-208ENST00000493815 NRXN3Q9Y4C0 1643 aa25.82■■□□□ 1.72
PDLIM7-208ENST00000493815 SETBP1Q9Y6X0 1596 aa25.81■■□□□ 1.72
PDLIM7-208ENST00000493815 MYOM2P54296 1465 aa25.81■■□□□ 1.72
PDLIM7-208ENST00000493815 TONSLQ96HA7 1378 aa25.81■■□□□ 1.72
PDLIM7-208ENST00000493815 TBX22Q9Y458 520 aa25.8■■□□□ 1.72
PDLIM7-208ENST00000493815 PIK3C2GO75747 1445 aa25.79■■□□□ 1.72
PDLIM7-208ENST00000493815 NRXN1Q9ULB1 1477 aa25.78■■□□□ 1.72
PDLIM7-208ENST00000493815 METP08581 1390 aa25.77■■□□□ 1.72
PDLIM7-208ENST00000493815 CFAP70Q5T0N1 1121 aa25.77■■□□□ 1.72
PDLIM7-208ENST00000493815 ALKQ9UM73 1620 aa25.76■■□□□ 1.71
PDLIM7-208ENST00000493815 STAC3Q96MF2 364 aa25.74■■□□□ 1.71
PDLIM7-208ENST00000493815 DIP2AQ14689 1571 aa25.73■■□□□ 1.71
PDLIM7-208ENST00000493815 TMEM132EQ6IEE7 984 aa25.72■■□□□ 1.71
PDLIM7-208ENST00000493815 C14orf93Q9H972 538 aaKnown RBP25.72■■□□□ 1.71
PDLIM7-208ENST00000493815 PRAG1Q86YV5 1406 aa25.7■■□□□ 1.71
PDLIM7-208ENST00000493815 PTPRUQ92729 1446 aa25.7■■□□□ 1.71
PDLIM7-208ENST00000493815 KCNA6P17658 529 aa25.7■■□□□ 1.7
PDLIM7-208ENST00000493815 SETD1AO15047 1707 aaKnown RBP25.69■■□□□ 1.7
PDLIM7-208ENST00000493815 STRCP1A6NGW2 1772 aa25.69■■□□□ 1.7
PDLIM7-208ENST00000493815 AMOTL2Q9Y2J4 779 aa25.68■■□□□ 1.7
PDLIM7-208ENST00000493815 LTBP4Q8N2S1 1624 aa25.67■■□□□ 1.7
PDLIM7-208ENST00000493815 NBPF8Q3BBV2 869 aa25.67■■□□□ 1.7
PDLIM7-208ENST00000493815 RBM33Q96EV2 1170 aaKnown RBP25.67■■□□□ 1.7
PDLIM7-208ENST00000493815 STK26Q9P289 416 aa25.66■■□□□ 1.7
PDLIM7-208ENST00000493815 PIK3R4Q99570 1358 aa25.66■■□□□ 1.7
PDLIM7-208ENST00000493815 ASXL1Q8IXJ9 1541 aa25.65■■□□□ 1.7
PDLIM7-208ENST00000493815 NBPF1Q3BBV0 1214 aa25.64■■□□□ 1.69
PDLIM7-208ENST00000493815 CHD2O14647 1828 aaKnown RBP25.63■■□□□ 1.69
PDLIM7-208ENST00000493815 NWD1Q149M9 1564 aa25.61■■□□□ 1.69
PDLIM7-208ENST00000493815 LAMC1P11047 1609 aa25.6■■□□□ 1.69
PDLIM7-208ENST00000493815 PROSER2Q86WR7 435 aaPredicted RBP25.6■■□□□ 1.69
PDLIM7-208ENST00000493815 TIMELESSQ9UNS1 1208 aa25.6■■□□□ 1.69
PDLIM7-208ENST00000493815 ADGRB1O14514 1584 aa25.58■■□□□ 1.69
PDLIM7-208ENST00000493815 CPS1P31327 1500 aa25.58■■□□□ 1.69
PDLIM7-208ENST00000493815 YTHDC2Q9H6S0 1430 aaKnown RBP25.58■■□□□ 1.69
PDLIM7-208ENST00000493815 LRRC7Q96NW7 1537 aa25.58■■□□□ 1.69
PDLIM7-208ENST00000493815 XRN1Q8IZH2 1706 aaKnown RBP25.57■■□□□ 1.68
PDLIM7-208ENST00000493815 LRPPRCP42704 1394 aaKnown RBP25.57■■□□□ 1.68
PDLIM7-208ENST00000493815 ROBO2Q9HCK4 1378 aa25.56■■□□□ 1.68
PDLIM7-208ENST00000493815 NKTRP30414 1462 aaKnown RBP25.56■■□□□ 1.68
PDLIM7-208ENST00000493815 CERKQ8TCT0 537 aa25.55■■□□□ 1.68
PDLIM7-208ENST00000493815 TRAK1Q9UPV9 953 aa25.55■■□□□ 1.68
PDLIM7-208ENST00000493815 TMEM94Q12767 1356 aa25.55■■□□□ 1.68
PDLIM7-208ENST00000493815 TRPM1Q7Z4N2 1603 aa25.53■■□□□ 1.68
PDLIM7-208ENST00000493815 KIAA1210Q9ULL0 1709 aa25.53■■□□□ 1.68
PDLIM7-208ENST00000493815 ROCK2O75116 1388 aaKnown RBP25.52■■□□□ 1.68
PDLIM7-208ENST00000493815 ABCC11Q96J66 1382 aa25.52■■□□□ 1.68
PDLIM7-208ENST00000493815 WAPLQ7Z5K2 1190 aa25.52■■□□□ 1.68
PDLIM7-208ENST00000493815 PTCH1Q13635 1447 aa25.49■■□□□ 1.67
PDLIM7-208ENST00000493815 PLEKHH1Q9ULM0 1364 aa25.49■■□□□ 1.67
PDLIM7-208ENST00000493815 TECPR2O15040 1411 aa25.49■■□□□ 1.67
PDLIM7-208ENST00000493815 C14orf37Q86TY3 774 aa25.48■■□□□ 1.67
PDLIM7-208ENST00000493815 SAFB2Q14151 953 aaKnown RBP eCLIP25.48■■□□□ 1.67
PDLIM7-208ENST00000493815 RALGAPBQ86X10 1494 aa25.47■■□□□ 1.67
PDLIM7-208ENST00000493815 PRAM1Q96QH2 718 aa25.47■■□□□ 1.67
PDLIM7-208ENST00000493815 XIRP1Q702N8 1843 aaKnown RBP25.46■■□□□ 1.67
PDLIM7-208ENST00000493815 CARD11Q9BXL7 1154 aa25.45■■□□□ 1.67
PDLIM7-208ENST00000493815 KNDC1Q76NI1 1749 aa25.44■■□□□ 1.66
PDLIM7-208ENST00000493815 POGKQ9P215 609 aa25.43■■□□□ 1.66
PDLIM7-208ENST00000493815 GPRASP1Q5JY77 1395 aa25.42■■□□□ 1.66
PDLIM7-208ENST00000493815 FAM135BQ49AJ0 1406 aa25.41■■□□□ 1.66
PDLIM7-208ENST00000493815 SIRT1Q96EB6 747 aa25.41■■□□□ 1.66
PDLIM7-208ENST00000493815 DLC1Q96QB1 1528 aa25.41■■□□□ 1.66
PDLIM7-208ENST00000493815 MSH6P52701 1360 aa25.39■■□□□ 1.65
PDLIM7-208ENST00000493815 C19orf44Q9H6X5 657 aa25.39■■□□□ 1.65
PDLIM7-208ENST00000493815 NCOA3Q9Y6Q9 1424 aa25.38■■□□□ 1.65
PDLIM7-208ENST00000493815 ARHGEF28Q8N1W1 1705 aaKnown RBP25.37■■□□□ 1.65
PDLIM7-208ENST00000493815 ADGRL3Q9HAR2 1447 aa25.37■■□□□ 1.65
PDLIM7-208ENST00000493815 IQSEC2Q5JU85 1478 aa25.37■■□□□ 1.65
PDLIM7-208ENST00000493815 HIRIP3Q9BW71 556 aaPredicted RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms