RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 NEURL4Q96JN8 1562 aa10.98□□□□□ -0.65
VEGFA-214ENST00000493786 BCANQ96GW7 911 aa10.97□□□□□ -0.65
VEGFA-214ENST00000493786 TONSLQ96HA7 1378 aa10.97□□□□□ -0.65
VEGFA-214ENST00000493786 SPATA31E1Q6ZUB1 1445 aa10.97□□□□□ -0.65
VEGFA-214ENST00000493786 SLIT1O75093 1534 aa10.97□□□□□ -0.65
VEGFA-214ENST00000493786 SCAF11Q99590 1463 aaKnown RBP10.96□□□□□ -0.65
VEGFA-214ENST00000493786 ARHGAP23Q9P227 1491 aa10.96□□□□□ -0.65
VEGFA-214ENST00000493786 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-214ENST00000493786 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
VEGFA-214ENST00000493786 NUTM2DQ5VT03 806 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-214ENST00000493786 STAC3Q96MF2 364 aa10.95□□□□□ -0.66
VEGFA-214ENST00000493786 DMRT2Q9Y5R5 561 aa10.95□□□□□ -0.66
VEGFA-214ENST00000493786 ZFYVE9O95405 1425 aa10.94□□□□□ -0.66
VEGFA-214ENST00000493786 MYO5BQ9ULV0 1848 aa10.94□□□□□ -0.66
VEGFA-214ENST00000493786 DCAF11Q8TEB1 546 aa10.94□□□□□ -0.66
VEGFA-214ENST00000493786 LTKP29376 864 aa10.93□□□□□ -0.66
VEGFA-214ENST00000493786 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
VEGFA-214ENST00000493786 NEXMIFQ5QGS0 1516 aa10.93□□□□□ -0.66
VEGFA-214ENST00000493786 NPHP4O75161 1426 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-214ENST00000493786 PLEKHG1Q9ULL1 1385 aa10.92□□□□□ -0.66
VEGFA-214ENST00000493786 TIMELESSQ9UNS1 1208 aa10.92□□□□□ -0.66
VEGFA-214ENST00000493786 L3MBTL2Q969R5 705 aa10.91□□□□□ -0.66
VEGFA-214ENST00000493786 SENP3Q9H4L4 574 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-214ENST00000493786 POLR1AO95602 1720 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-214ENST00000493786 MYOM2P54296 1465 aa10.91□□□□□ -0.66
VEGFA-214ENST00000493786 MED14O60244 1454 aa10.9□□□□□ -0.66
VEGFA-214ENST00000493786 PPLO60437 1756 aa10.9□□□□□ -0.67
VEGFA-214ENST00000493786 ADGRF5Q8IZF2 1346 aa10.89□□□□□ -0.67
VEGFA-214ENST00000493786 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
VEGFA-214ENST00000493786 IFT172Q9UG01 1749 aa10.87□□□□□ -0.67
VEGFA-214ENST00000493786 PIK3C2GO75747 1445 aa10.87□□□□□ -0.67
VEGFA-214ENST00000493786 SLC26A8Q96RN1 970 aa10.87□□□□□ -0.67
VEGFA-214ENST00000493786 STRCQ7RTU9 1775 aa10.87□□□□□ -0.67
VEGFA-214ENST00000493786 DIP2AQ14689 1571 aa10.86□□□□□ -0.67
VEGFA-214ENST00000493786 SETBP1Q9Y6X0 1596 aa10.86□□□□□ -0.67
VEGFA-214ENST00000493786 TBX22Q9Y458 520 aa10.86□□□□□ -0.67
VEGFA-214ENST00000493786 NRXN1Q9ULB1 1477 aa10.86□□□□□ -0.67
VEGFA-214ENST00000493786 PRAG1Q86YV5 1406 aa10.84□□□□□ -0.67
VEGFA-214ENST00000493786 LAMC1P11047 1609 aa10.84□□□□□ -0.67
VEGFA-214ENST00000493786 ADAMTS13Q76LX8 1427 aa10.84□□□□□ -0.67
VEGFA-214ENST00000493786 PIK3R4Q99570 1358 aa10.83□□□□□ -0.68
VEGFA-214ENST00000493786 CFAP70Q5T0N1 1121 aa10.83□□□□□ -0.68
VEGFA-214ENST00000493786 PHF23Q9BUL5 403 aaPredicted RBP10.83□□□□□ -0.68
VEGFA-214ENST00000493786 C14orf93Q9H972 538 aaKnown RBP10.83□□□□□ -0.68
VEGFA-214ENST00000493786 ALKQ9UM73 1620 aa10.83□□□□□ -0.68
VEGFA-214ENST00000493786 ROCK2O75116 1388 aaKnown RBP10.81□□□□□ -0.68
VEGFA-214ENST00000493786 METP08581 1390 aa10.81□□□□□ -0.68
VEGFA-214ENST00000493786 NRXN3Q9Y4C0 1643 aa10.81□□□□□ -0.68
VEGFA-214ENST00000493786 KCNA6P17658 529 aa10.81□□□□□ -0.68
VEGFA-214ENST00000493786 ZEB1P37275 1124 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-214ENST00000493786 STK26Q9P289 416 aa10.8□□□□□ -0.68
VEGFA-214ENST00000493786 ZNF335Q9H4Z2 1342 aaPredicted RBP10.8□□□□□ -0.68
VEGFA-214ENST00000493786 NBPF8Q3BBV2 869 aa10.79□□□□□ -0.68
VEGFA-214ENST00000493786 TMEM132EQ6IEE7 984 aa10.79□□□□□ -0.68
VEGFA-214ENST00000493786 AMOTL2Q9Y2J4 779 aa10.79□□□□□ -0.68
VEGFA-214ENST00000493786 LRPPRCP42704 1394 aaKnown RBP10.78□□□□□ -0.68
VEGFA-214ENST00000493786 KIAA1210Q9ULL0 1709 aa10.78□□□□□ -0.68
VEGFA-214ENST00000493786 CARD11Q9BXL7 1154 aa10.78□□□□□ -0.68
VEGFA-214ENST00000493786 RALGAPBQ86X10 1494 aa10.78□□□□□ -0.68
VEGFA-214ENST00000493786 YTHDC2Q9H6S0 1430 aaKnown RBP10.77□□□□□ -0.68
VEGFA-214ENST00000493786 NKTRP30414 1462 aaKnown RBP10.77□□□□□ -0.69
VEGFA-214ENST00000493786 NBPF1Q3BBV0 1214 aa10.77□□□□□ -0.69
VEGFA-214ENST00000493786 PROSER2Q86WR7 435 aaPredicted RBP10.77□□□□□ -0.69
VEGFA-214ENST00000493786 CPS1P31327 1500 aa10.77□□□□□ -0.69
VEGFA-214ENST00000493786 EIF3AQ14152 1382 aaKnown RBP10.77□□□□□ -0.69
VEGFA-214ENST00000493786 PTPRUQ92729 1446 aa10.76□□□□□ -0.69
VEGFA-214ENST00000493786 SETD1AO15047 1707 aaKnown RBP10.76□□□□□ -0.69
VEGFA-214ENST00000493786 C14orf37Q86TY3 774 aa10.76□□□□□ -0.69
VEGFA-214ENST00000493786 TRAK1Q9UPV9 953 aa10.76□□□□□ -0.69
VEGFA-214ENST00000493786 ADGRB1O14514 1584 aa10.76□□□□□ -0.69
VEGFA-214ENST00000493786 NWD1Q149M9 1564 aa10.76□□□□□ -0.69
VEGFA-214ENST00000493786 TRPM1Q7Z4N2 1603 aa10.76□□□□□ -0.69
VEGFA-214ENST00000493786 ABCC11Q96J66 1382 aa10.76□□□□□ -0.69
VEGFA-214ENST00000493786 PTCH1Q13635 1447 aa10.75□□□□□ -0.69
VEGFA-214ENST00000493786 ASXL1Q8IXJ9 1541 aa10.75□□□□□ -0.69
VEGFA-214ENST00000493786 POGKQ9P215 609 aa10.75□□□□□ -0.69
VEGFA-214ENST00000493786 GPRASP1Q5JY77 1395 aa10.75□□□□□ -0.69
VEGFA-214ENST00000493786 CHD2O14647 1828 aaKnown RBP10.74□□□□□ -0.69
VEGFA-214ENST00000493786 TECPR2O15040 1411 aa10.74□□□□□ -0.69
VEGFA-214ENST00000493786 XRN1Q8IZH2 1706 aaKnown RBP10.73□□□□□ -0.69
VEGFA-214ENST00000493786 SIRT1Q96EB6 747 aa10.73□□□□□ -0.69
VEGFA-214ENST00000493786 PRAM1Q96QH2 718 aa10.73□□□□□ -0.69
VEGFA-214ENST00000493786 FAM135BQ49AJ0 1406 aa10.73□□□□□ -0.69
VEGFA-214ENST00000493786 DLC1Q96QB1 1528 aa10.73□□□□□ -0.69
VEGFA-214ENST00000493786 TMEM94Q12767 1356 aa10.72□□□□□ -0.69
VEGFA-214ENST00000493786 ROBO2Q9HCK4 1378 aa10.72□□□□□ -0.69
VEGFA-214ENST00000493786 KNDC1Q76NI1 1749 aa10.72□□□□□ -0.69
VEGFA-214ENST00000493786 SAFB2Q14151 953 aaKnown RBP eCLIP10.71□□□□□ -0.69
VEGFA-214ENST00000493786 WAPLQ7Z5K2 1190 aa10.71□□□□□ -0.69
VEGFA-214ENST00000493786 LRRC7Q96NW7 1537 aa10.71□□□□□ -0.69
VEGFA-214ENST00000493786 CENPJQ9HC77 1338 aaPredicted RBP10.71□□□□□ -0.69
VEGFA-214ENST00000493786 NCOA3Q9Y6Q9 1424 aa10.71□□□□□ -0.69
VEGFA-214ENST00000493786 LTBP4Q8N2S1 1624 aa10.7□□□□□ -0.7
VEGFA-214ENST00000493786 MSH6P52701 1360 aa10.7□□□□□ -0.7
VEGFA-214ENST00000493786 USP47Q96K76 1375 aa10.7□□□□□ -0.7
VEGFA-214ENST00000493786 RBM33Q96EV2 1170 aaKnown RBP10.7□□□□□ -0.7
VEGFA-214ENST00000493786 STRCP1A6NGW2 1772 aa10.7□□□□□ -0.7
VEGFA-214ENST00000493786 EIF4G2P78344 907 aaKnown RBP eCLIP10.69□□□□□ -0.7
VEGFA-214ENST00000493786 CERKQ8TCT0 537 aa10.69□□□□□ -0.7
VEGFA-214ENST00000493786 ADGRL3Q9HAR2 1447 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms