RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 CDHR5Q9HBB8 845 aa13.48□□□□□ -0.25
LRCH3-218ENST00000493726 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
LRCH3-218ENST00000493726 GAPVD1Q14C86 1478 aa13.47□□□□□ -0.25
LRCH3-218ENST00000493726 SNAPC4Q5SXM2 1469 aa13.47□□□□□ -0.25
LRCH3-218ENST00000493726 MLLT3P42568 568 aaPredicted RBP13.46□□□□□ -0.25
LRCH3-218ENST00000493726 CLASP1Q7Z460 1538 aa13.45□□□□□ -0.26
LRCH3-218ENST00000493726 PBRM1Q86U86 1689 aa13.45□□□□□ -0.26
LRCH3-218ENST00000493726 SYNJ2O15056 1496 aa13.45□□□□□ -0.26
LRCH3-218ENST00000493726 TSKSQ9UJT2 592 aa13.45□□□□□ -0.26
LRCH3-218ENST00000493726 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
LRCH3-218ENST00000493726 HAP1P54257 671 aaPredicted RBP13.43□□□□□ -0.26
LRCH3-218ENST00000493726 PLA2G2EQ9NZK7 142 aa13.43□□□□□ -0.26
LRCH3-218ENST00000493726 ONECUT3O60422 494 aaPredicted RBP13.42□□□□□ -0.26
LRCH3-218ENST00000493726 CDCA7LQ96GN5 454 aa13.41□□□□□ -0.26
LRCH3-218ENST00000493726 BCAMP50895 628 aa13.4□□□□□ -0.26
LRCH3-218ENST00000493726 ANKK1Q8NFD2 765 aa13.4□□□□□ -0.26
LRCH3-218ENST00000493726 ZFRQ96KR1 1074 aaKnown RBP13.4□□□□□ -0.26
LRCH3-218ENST00000493726 FAM198AQ9UFP1 575 aa13.4□□□□□ -0.26
LRCH3-218ENST00000493726 ERICH3Q5RHP9 1530 aa13.39□□□□□ -0.27
LRCH3-218ENST00000493726 SMAPO00193 183 aa13.38□□□□□ -0.27
LRCH3-218ENST00000493726 PRSS12P56730 875 aa13.38□□□□□ -0.27
LRCH3-218ENST00000493726 LAPTM4BQ86VI4 370 aa13.38□□□□□ -0.27
LRCH3-218ENST00000493726 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
LRCH3-218ENST00000493726 C3orf80F5H4A9 247 aa13.37□□□□□ -0.27
LRCH3-218ENST00000493726 PACS2Q86VP3 889 aa13.36□□□□□ -0.27
LRCH3-218ENST00000493726 P3H3Q8IVL6 736 aa13.36□□□□□ -0.27
LRCH3-218ENST00000493726 FAM98CQ17RN3 349 aaKnown RBP13.35□□□□□ -0.27
LRCH3-218ENST00000493726 NUP160Q12769 1436 aa13.34□□□□□ -0.27
LRCH3-218ENST00000493726 CERKQ8TCT0 537 aa13.34□□□□□ -0.27
LRCH3-218ENST00000493726 NPDC1Q9NQX5 325 aaPredicted RBP13.34□□□□□ -0.27
LRCH3-218ENST00000493726 GRIN2AQ12879 1464 aa13.34□□□□□ -0.27
LRCH3-218ENST00000493726 SOWAHBA6NEL2 793 aa13.33□□□□□ -0.28
LRCH3-218ENST00000493726 SEMA3EO15041 775 aa13.33□□□□□ -0.28
LRCH3-218ENST00000493726 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
LRCH3-218ENST00000493726 FHAD1B1AJZ9 1412 aa13.32□□□□□ -0.28
LRCH3-218ENST00000493726 CYB5RLQ6IPT4 315 aa13.32□□□□□ -0.28
LRCH3-218ENST00000493726 CHMP7Q8WUX9 453 aaPredicted RBP13.32□□□□□ -0.28
LRCH3-218ENST00000493726 PNMA3Q9UL41 463 aa13.31□□□□□ -0.28
LRCH3-218ENST00000493726 PADI6Q6TGC4 694 aa13.29□□□□□ -0.28
LRCH3-218ENST00000493726 TATDN2Q93075 761 aa13.29□□□□□ -0.28
LRCH3-218ENST00000493726 KDM2AQ9Y2K7 1162 aa13.29□□□□□ -0.28
LRCH3-218ENST00000493726 CEP170Q5SW79 1584 aa13.28□□□□□ -0.28
LRCH3-218ENST00000493726 WBP1LQ9NX94 342 aa13.28□□□□□ -0.28
LRCH3-218ENST00000493726 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
LRCH3-218ENST00000493726 NUDT18Q6ZVK8 323 aa13.27□□□□□ -0.29
LRCH3-218ENST00000493726 LRCH3Q96II8 777 aa13.27□□□□□ -0.29
LRCH3-218ENST00000493726 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.27□□□□□ -0.29
LRCH3-218ENST00000493726 NBPF26B4DH59 902 aa13.26□□□□□ -0.29
LRCH3-218ENST00000493726 HPS5Q9UPZ3 1129 aa13.25□□□□□ -0.29
LRCH3-218ENST00000493726 SAMD7Q7Z3H4 446 aa13.24□□□□□ -0.29
LRCH3-218ENST00000493726 RBM27Q9P2N5 1060 aaKnown RBP13.24□□□□□ -0.29
LRCH3-218ENST00000493726 IGF1RP08069 1367 aa13.22□□□□□ -0.29
LRCH3-218ENST00000493726 NUTM2FA1L443 756 aa13.22□□□□□ -0.29
LRCH3-218ENST00000493726 TTC13Q8NBP0 860 aa13.22□□□□□ -0.29
LRCH3-218ENST00000493726 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
LRCH3-218ENST00000493726 PTGDRQ13258 359 aa13.21□□□□□ -0.29
LRCH3-218ENST00000493726 TSR3Q9UJK0 312 aaKnown RBP13.21□□□□□ -0.29
LRCH3-218ENST00000493726 CUL7Q14999 1698 aa13.21□□□□□ -0.3
LRCH3-218ENST00000493726 RUSC2Q8N2Y8 1516 aa13.19□□□□□ -0.3
LRCH3-218ENST00000493726 ERCC6L2Q5T890 1561 aa13.18□□□□□ -0.3
LRCH3-218ENST00000493726 TESPA1A2RU30 521 aaPredicted RBP13.17□□□□□ -0.3
LRCH3-218ENST00000493726 RNF40O75150 1001 aa13.17□□□□□ -0.3
LRCH3-218ENST00000493726 PPP4CP60510 307 aa13.16□□□□□ -0.3
LRCH3-218ENST00000493726 FAM161AQ3B820 660 aa13.15□□□□□ -0.3
LRCH3-218ENST00000493726 RBM26Q5T8P6 1007 aaKnown RBP13.15□□□□□ -0.3
LRCH3-218ENST00000493726 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
LRCH3-218ENST00000493726 NYAP1Q6ZVC0 841 aa13.13□□□□□ -0.31
LRCH3-218ENST00000493726 EYA1Q99502 592 aa13.13□□□□□ -0.31
LRCH3-218ENST00000493726 SWT1Q5T5J6 900 aaKnown RBP13.12□□□□□ -0.31
LRCH3-218ENST00000493726 ITGBL1O95965 494 aaPredicted RBP13.11□□□□□ -0.31
LRCH3-218ENST00000493726 FCHSD2O94868 740 aa13.1□□□□□ -0.31
LRCH3-218ENST00000493726 IFFO2Q5TF58 517 aa13.1□□□□□ -0.31
LRCH3-218ENST00000493726 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
LRCH3-218ENST00000493726 HDGFP51858 240 aaKnown RBP13.09□□□□□ -0.31
LRCH3-218ENST00000493726 PRG4Q92954 1404 aaPredicted RBP13.08□□□□□ -0.32
LRCH3-218ENST00000493726 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
LRCH3-218ENST00000493726 A0A0G2JS52 829 aa13.07□□□□□ -0.32
LRCH3-218ENST00000493726 ADGRG1Q9Y653 693 aa13.07□□□□□ -0.32
LRCH3-218ENST00000493726 SMYD5Q6GMV2 418 aa13.06□□□□□ -0.32
LRCH3-218ENST00000493726 KCNC4Q03721 635 aa13.04□□□□□ -0.32
LRCH3-218ENST00000493726 FECHP22830 423 aa13.03□□□□□ -0.32
LRCH3-218ENST00000493726 APLP1P51693 650 aa13.03□□□□□ -0.32
LRCH3-218ENST00000493726 RBM46Q8TBY0 533 aaKnown RBP13.03□□□□□ -0.32
LRCH3-218ENST00000493726 SLF2Q8IX21 1173 aa13.02□□□□□ -0.33
LRCH3-218ENST00000493726 RAPGEF2Q9Y4G8 1499 aa13.02□□□□□ -0.33
LRCH3-218ENST00000493726 IQGAP2Q13576 1575 aa13□□□□□ -0.33
LRCH3-218ENST00000493726 PRXQ9BXM0 1461 aa13□□□□□ -0.33
LRCH3-218ENST00000493726 RCCD1A6NED2 376 aa13□□□□□ -0.33
LRCH3-218ENST00000493726 GPR37O15354 613 aa13□□□□□ -0.33
LRCH3-218ENST00000493726 DNAJB2P25686 324 aa13□□□□□ -0.33
LRCH3-218ENST00000493726 HIC1Q14526 733 aa13□□□□□ -0.33
LRCH3-218ENST00000493726 TJAP1Q5JTD0 557 aa13□□□□□ -0.33
LRCH3-218ENST00000493726 MTRQ99707 1265 aa13□□□□□ -0.33
LRCH3-218ENST00000493726 UGGT2Q9NYU1 1516 aa12.99□□□□□ -0.33
LRCH3-218ENST00000493726 TMEM134Q9H6X4 195 aa12.97□□□□□ -0.33
LRCH3-218ENST00000493726 MAPKBP1O60336 1514 aa12.97□□□□□ -0.33
LRCH3-218ENST00000493726 DISP1Q96F81 1524 aa12.97□□□□□ -0.33
LRCH3-218ENST00000493726 ADCY10Q96PN6 1610 aa12.96□□□□□ -0.33
LRCH3-218ENST00000493726 GNPATO15228 680 aa12.96□□□□□ -0.33
LRCH3-218ENST00000493726 SLC4A3P48751 1232 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms