RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 SKIV2LQ15477 1246 aaKnown RBP5.87□□□□□ -1.47
SUPT20H-221ENST00000493537 DPH6Q7L8W6 267 aa5.87□□□□□ -1.47
SUPT20H-221ENST00000493537 JADE2Q9NQC1 790 aa5.87□□□□□ -1.47
SUPT20H-221ENST00000493537 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.87□□□□□ -1.47
SUPT20H-221ENST00000493537 PARNO95453 639 aaKnown RBP5.87□□□□□ -1.47
SUPT20H-221ENST00000493537 MMP14P50281 582 aa5.87□□□□□ -1.47
SUPT20H-221ENST00000493537 IGBP1P78318 339 aa5.87□□□□□ -1.47
SUPT20H-221ENST00000493537 PMM1Q92871 262 aa5.87□□□□□ -1.47
SUPT20H-221ENST00000493537 CCDC85AQ96PX6 553 aaPredicted RBP5.87□□□□□ -1.47
SUPT20H-221ENST00000493537 TMA7Q9Y2S6 64 aaKnown RBP5.87□□□□□ -1.47
SUPT20H-221ENST00000493537 COMMD10Q9Y6G5 202 aa5.87□□□□□ -1.47
SUPT20H-221ENST00000493537 SBNO2Q9Y2G9 1366 aa5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 ZRANB2O95218 330 aaKnown RBP eCLIP5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 CSB-PGBD3P0DP91 1061 aa5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 GTF2E1P29083 439 aaPredicted RBP5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 DSG3P32926 999 aa5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 NAALADL2Q58DX5 795 aa5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 HSP90AB2PQ58FF8 381 aa5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 NOP9Q86U38 636 aaKnown RBP5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 ZNF330Q9Y3S2 320 aaPredicted RBP5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 hCG_2014768A0A024R1R8 64 aa5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 KIF4AO95239 1232 aa5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 ZNF16P17020 682 aaPredicted RBP5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 CEP120Q8N960 986 aa5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 ANP32BQ92688 251 aaKnown RBP5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 GPATCH3Q96I76 525 aa5.86□□□□□ -1.47
SUPT20H-221ENST00000493537 U2SURPO15042 1029 aaKnown RBP5.85□□□□□ -1.47
SUPT20H-221ENST00000493537 E2F4Q16254 413 aa5.85□□□□□ -1.47
SUPT20H-221ENST00000493537 CCDC96Q2M329 555 aa5.85□□□□□ -1.47
SUPT20H-221ENST00000493537 NBPF20Q3BBV1 942 aa5.85□□□□□ -1.47
SUPT20H-221ENST00000493537 GPIHBP1Q8IV16 184 aa5.85□□□□□ -1.47
SUPT20H-221ENST00000493537 VTI1AQ96AJ9 217 aa5.85□□□□□ -1.47
SUPT20H-221ENST00000493537 PCMTD1Q96MG8 357 aaPredicted RBP5.85□□□□□ -1.47
SUPT20H-221ENST00000493537 FAN1Q9Y2M0 1017 aa5.85□□□□□ -1.47
SUPT20H-221ENST00000493537 MKRN4PQ13434 485 aaPredicted RBP5.84□□□□□ -1.47
SUPT20H-221ENST00000493537 MAMSTRQ6ZN01 415 aa5.84□□□□□ -1.47
SUPT20H-221ENST00000493537 PABPN1Q86U42 306 aaKnown RBP eCLIP5.84□□□□□ -1.47
SUPT20H-221ENST00000493537 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.84□□□□□ -1.47
SUPT20H-221ENST00000493537 TRIM44Q96DX7 344 aaPredicted RBP5.84□□□□□ -1.47
SUPT20H-221ENST00000493537 NUB1Q9Y5A7 615 aa5.84□□□□□ -1.47
SUPT20H-221ENST00000493537 GOLIM4O00461 696 aa5.84□□□□□ -1.47
SUPT20H-221ENST00000493537 LARGE2Q8N3Y3 721 aa5.84□□□□□ -1.47
SUPT20H-221ENST00000493537 PNISRQ8TF01 805 aaKnown RBP5.84□□□□□ -1.47
SUPT20H-221ENST00000493537 STK24Q9Y6E0 443 aa5.84□□□□□ -1.47
SUPT20H-221ENST00000493537 SSFA2P28290 1259 aa5.83□□□□□ -1.48
SUPT20H-221ENST00000493537 TSPAN18Q96SJ8 248 aa5.83□□□□□ -1.48
SUPT20H-221ENST00000493537 ZNF219Q9P2Y4 722 aaPredicted RBP5.83□□□□□ -1.48
SUPT20H-221ENST00000493537 EPB41L2O43491 1005 aaKnown RBP5.83□□□□□ -1.48
SUPT20H-221ENST00000493537 WDHD1O75717 1129 aaPredicted RBP5.83□□□□□ -1.48
SUPT20H-221ENST00000493537 PTPROQ16827 1216 aa5.83□□□□□ -1.48
SUPT20H-221ENST00000493537 C4orf46Q504U0 113 aa5.83□□□□□ -1.48
SUPT20H-221ENST00000493537 ZNF280DQ6N043 979 aa5.83□□□□□ -1.48
SUPT20H-221ENST00000493537 AMOTL1Q8IY63 956 aa5.83□□□□□ -1.48
SUPT20H-221ENST00000493537 PBXIP1Q96AQ6 731 aa5.83□□□□□ -1.48
SUPT20H-221ENST00000493537 TBC1D12O60347 775 aa5.82□□□□□ -1.48
SUPT20H-221ENST00000493537 IBSPP21815 317 aaPredicted RBP5.82□□□□□ -1.48
SUPT20H-221ENST00000493537 SETDB1Q15047 1291 aa5.82□□□□□ -1.48
SUPT20H-221ENST00000493537 CCAR1Q8IX12 1150 aaKnown RBP5.82□□□□□ -1.48
SUPT20H-221ENST00000493537 GNL3LQ9NVN8 582 aaKnown RBP5.82□□□□□ -1.48
SUPT20H-221ENST00000493537 CHPF2Q9P2E5 772 aa5.82□□□□□ -1.48
SUPT20H-221ENST00000493537 STAG3Q9UJ98 1225 aa5.82□□□□□ -1.48
SUPT20H-221ENST00000493537 COPB2P35606 906 aa5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 PSME1Q06323 249 aa5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 KCNB2Q92953 911 aa5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 BCL2L13Q9BXK5 485 aa5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 TLDC2A0PJX2 215 aa5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 POLD1P28340 1107 aa5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 HDAC1Q13547 482 aaPredicted RBP5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 HNRNPUL2Q1KMD3 747 aaKnown RBP5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 CDCA8Q53HL2 280 aa5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 CALR3Q96L12 384 aaKnown RBP5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 FRMD4BQ9Y2L6 1034 aa5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 NOP58Q9Y2X3 529 aaKnown RBP5.81□□□□□ -1.48
SUPT20H-221ENST00000493537 CARNS1A5YM72 827 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 ZNF500O60304 480 aaPredicted RBP5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 ARMCX6Q7L4S7 300 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 STAC3Q96MF2 364 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 SENP7Q9BQF6 1050 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 WWC3Q9ULE0 1092 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 HDAC5Q9UQL6 1122 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 COG6Q9Y2V7 657 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 SH3BP1Q9Y3L3 701 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 CSPP1Q1MSJ5 1256 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 ZKSCAN2Q63HK3 967 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 EGFLAMQ63HQ2 1017 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 MIER1Q8N108 512 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.8□□□□□ -1.486e-7■■■□□ 16.4
SUPT20H-221ENST00000493537 GABBR1Q9UBS5 961 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 SWAP70Q9UH65 585 aa5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 FEZ2Q9UHY8 353 aaPredicted RBP5.8□□□□□ -1.48
SUPT20H-221ENST00000493537 HSP90AA1P07900 732 aaKnown RBP5.79□□□□□ -1.48
SUPT20H-221ENST00000493537 BDNFP23560 247 aa5.79□□□□□ -1.48
SUPT20H-221ENST00000493537 OTUD6BQ8N6M0 293 aa5.79□□□□□ -1.48
SUPT20H-221ENST00000493537 HELBQ8NG08 1087 aaPredicted RBP5.79□□□□□ -1.48
SUPT20H-221ENST00000493537 VRTNQ9H8Y1 702 aa5.79□□□□□ -1.48
SUPT20H-221ENST00000493537 APPP05067 770 aa5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 GYS2P54840 703 aa5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 RHBDL3P58872 404 aa5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 DNAJC14Q6Y2X3 702 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms