RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 ZNF326Q5BKZ1 582 aaKnown RBP24.73■■□□□ 1.55
RER1-208ENST00000493207 DMRT2Q9Y5R5 561 aa24.73■■□□□ 1.55
RER1-208ENST00000493207 MED14O60244 1454 aa24.71■■□□□ 1.55
RER1-208ENST00000493207 NPHP4O75161 1426 aaPredicted RBP24.7■■□□□ 1.55
RER1-208ENST00000493207 DHX57Q6P158 1386 aaKnown RBP24.7■■□□□ 1.55
RER1-208ENST00000493207 NEXMIFQ5QGS0 1516 aa24.67■■□□□ 1.54
RER1-208ENST00000493207 PPP1R15AO75807 674 aaPredicted RBP24.67■■□□□ 1.54
RER1-208ENST00000493207 NUTM2DQ5VT03 806 aaPredicted RBP24.67■■□□□ 1.54
RER1-208ENST00000493207 HDGFP51858 240 aaKnown RBP24.66■■□□□ 1.54
RER1-208ENST00000493207 SPATA31E1Q6ZUB1 1445 aa24.66■■□□□ 1.54
RER1-208ENST00000493207 PPLO60437 1756 aa24.65■■□□□ 1.54
RER1-208ENST00000493207 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.65■■□□□ 1.54
RER1-208ENST00000493207 RGL3Q3MIN7 710 aa24.64■■□□□ 1.54
RER1-208ENST00000493207 SENP3Q9H4L4 574 aaPredicted RBP24.63■■□□□ 1.53
RER1-208ENST00000493207 IFT172Q9UG01 1749 aa24.61■■□□□ 1.53
RER1-208ENST00000493207 PLEKHG1Q9ULL1 1385 aa24.61■■□□□ 1.53
RER1-208ENST00000493207 BCANQ96GW7 911 aa24.6■■□□□ 1.53
RER1-208ENST00000493207 RPGRIP1LQ68CZ1 1315 aa24.6■■□□□ 1.53
RER1-208ENST00000493207 NRXN3Q9Y4C0 1643 aa24.54■■□□□ 1.52
RER1-208ENST00000493207 VGFO15240 615 aaPredicted RBP24.54■■□□□ 1.52
RER1-208ENST00000493207 SLC26A8Q96RN1 970 aa24.54■■□□□ 1.52
RER1-208ENST00000493207 SETBP1Q9Y6X0 1596 aa24.53■■□□□ 1.52
RER1-208ENST00000493207 ZNF335Q9H4Z2 1342 aaPredicted RBP24.53■■□□□ 1.52
RER1-208ENST00000493207 SIN3AQ96ST3 1273 aa24.52■■□□□ 1.52
RER1-208ENST00000493207 ADAMTS13Q76LX8 1427 aa24.51■■□□□ 1.51
RER1-208ENST00000493207 DIP2AQ14689 1571 aa24.5■■□□□ 1.51
RER1-208ENST00000493207 NEUROD1Q13562 356 aa24.49■■□□□ 1.51
RER1-208ENST00000493207 STRCP1A6NGW2 1772 aa24.49■■□□□ 1.51
RER1-208ENST00000493207 ADGRF5Q8IZF2 1346 aa24.48■■□□□ 1.51
RER1-208ENST00000493207 LTBP4Q8N2S1 1624 aa24.48■■□□□ 1.51
RER1-208ENST00000493207 MYOM2P54296 1465 aa24.47■■□□□ 1.51
RER1-208ENST00000493207 DCAF11Q8TEB1 546 aa24.45■■□□□ 1.5
RER1-208ENST00000493207 TBX22Q9Y458 520 aa24.45■■□□□ 1.5
RER1-208ENST00000493207 SETD1AO15047 1707 aaKnown RBP24.44■■□□□ 1.5
RER1-208ENST00000493207 CHD2O14647 1828 aaKnown RBP24.44■■□□□ 1.5
RER1-208ENST00000493207 ALKQ9UM73 1620 aa24.43■■□□□ 1.5
RER1-208ENST00000493207 KDM2AQ9Y2K7 1162 aa24.43■■□□□ 1.5
RER1-208ENST00000493207 NRXN1Q9ULB1 1477 aa24.42■■□□□ 1.5
RER1-208ENST00000493207 PIK3C2GO75747 1445 aa24.42■■□□□ 1.5
RER1-208ENST00000493207 NWD1Q149M9 1564 aa24.41■■□□□ 1.5
RER1-208ENST00000493207 CPS1P31327 1500 aa24.4■■□□□ 1.5
RER1-208ENST00000493207 METP08581 1390 aa24.39■■□□□ 1.49
RER1-208ENST00000493207 KCNA6P17658 529 aa24.38■■□□□ 1.49
RER1-208ENST00000493207 CCER1Q8TC90 406 aaPredicted RBP24.37■■□□□ 1.49
RER1-208ENST00000493207 PIK3R4Q99570 1358 aa24.37■■□□□ 1.49
RER1-208ENST00000493207 LAMC1P11047 1609 aa24.36■■□□□ 1.49
RER1-208ENST00000493207 L3MBTL2Q969R5 705 aa24.36■■□□□ 1.49
RER1-208ENST00000493207 STAC3Q96MF2 364 aa24.36■■□□□ 1.49
RER1-208ENST00000493207 PTPRUQ92729 1446 aa24.35■■□□□ 1.49
RER1-208ENST00000493207 CERKQ8TCT0 537 aa24.34■■□□□ 1.49
RER1-208ENST00000493207 NKTRP30414 1462 aaKnown RBP24.33■■□□□ 1.49
RER1-208ENST00000493207 XRN1Q8IZH2 1706 aaKnown RBP24.33■■□□□ 1.49
RER1-208ENST00000493207 LRRC7Q96NW7 1537 aa24.33■■□□□ 1.49
RER1-208ENST00000493207 CLSPNQ9HAW4 1339 aa24.33■■□□□ 1.48
RER1-208ENST00000493207 TONSLQ96HA7 1378 aa24.32■■□□□ 1.48
RER1-208ENST00000493207 AMOTL2Q9Y2J4 779 aa24.32■■□□□ 1.48
RER1-208ENST00000493207 XIRP1Q702N8 1843 aaKnown RBP24.31■■□□□ 1.48
RER1-208ENST00000493207 CFAP70Q5T0N1 1121 aa24.31■■□□□ 1.48
RER1-208ENST00000493207 ASXL1Q8IXJ9 1541 aa24.3■■□□□ 1.48
RER1-208ENST00000493207 C14orf93Q9H972 538 aaKnown RBP24.3■■□□□ 1.48
RER1-208ENST00000493207 PRAG1Q86YV5 1406 aa24.28■■□□□ 1.48
RER1-208ENST00000493207 PROSER2Q86WR7 435 aaPredicted RBP24.28■■□□□ 1.48
RER1-208ENST00000493207 TMEM132EQ6IEE7 984 aa24.27■■□□□ 1.48
RER1-208ENST00000493207 IQSEC2Q5JU85 1478 aa24.26■■□□□ 1.47
RER1-208ENST00000493207 RBM33Q96EV2 1170 aaKnown RBP24.26■■□□□ 1.47
RER1-208ENST00000493207 KIAA1210Q9ULL0 1709 aa24.25■■□□□ 1.47
RER1-208ENST00000493207 TMEM94Q12767 1356 aa24.24■■□□□ 1.47
RER1-208ENST00000493207 ADGRB1O14514 1584 aa24.23■■□□□ 1.47
RER1-208ENST00000493207 KNDC1Q76NI1 1749 aa24.23■■□□□ 1.47
RER1-208ENST00000493207 YTHDC2Q9H6S0 1430 aaKnown RBP24.22■■□□□ 1.47
RER1-208ENST00000493207 STK26Q9P289 416 aa24.22■■□□□ 1.47
RER1-208ENST00000493207 LRPPRCP42704 1394 aaKnown RBP24.21■■□□□ 1.47
RER1-208ENST00000493207 PTCH1Q13635 1447 aa24.2■■□□□ 1.46
RER1-208ENST00000493207 TRPM1Q7Z4N2 1603 aa24.2■■□□□ 1.46
RER1-208ENST00000493207 ROBO2Q9HCK4 1378 aa24.19■■□□□ 1.46
RER1-208ENST00000493207 TECPR2O15040 1411 aa24.18■■□□□ 1.46
RER1-208ENST00000493207 ABCC11Q96J66 1382 aa24.16■■□□□ 1.46
RER1-208ENST00000493207 NBPF1Q3BBV0 1214 aa24.15■■□□□ 1.46
RER1-208ENST00000493207 NBPF8Q3BBV2 869 aa24.15■■□□□ 1.46
RER1-208ENST00000493207 C14orf37Q86TY3 774 aa24.15■■□□□ 1.46
RER1-208ENST00000493207 NCOA3Q9Y6Q9 1424 aa24.15■■□□□ 1.46
RER1-208ENST00000493207 NALCNQ8IZF0 1738 aa24.15■■□□□ 1.46
RER1-208ENST00000493207 MSH6P52701 1360 aa24.13■■□□□ 1.45
RER1-208ENST00000493207 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.13■■□□□ 1.45
RER1-208ENST00000493207 TIMELESSQ9UNS1 1208 aa24.12■■□□□ 1.45
RER1-208ENST00000493207 DLC1Q96QB1 1528 aa24.11■■□□□ 1.45
RER1-208ENST00000493207 ARHGEF28Q8N1W1 1705 aaKnown RBP24.11■■□□□ 1.45
RER1-208ENST00000493207 UBAP1LF5GYI3 381 aa24.11■■□□□ 1.45
RER1-208ENST00000493207 TRAK1Q9UPV9 953 aa24.11■■□□□ 1.45
RER1-208ENST00000493207 WAPLQ7Z5K2 1190 aa24.1■■□□□ 1.45
RER1-208ENST00000493207 ROCK2O75116 1388 aaKnown RBP24.09■■□□□ 1.45
RER1-208ENST00000493207 PLEKHH1Q9ULM0 1364 aa24.09■■□□□ 1.45
RER1-208ENST00000493207 FAM135BQ49AJ0 1406 aa24.09■■□□□ 1.45
RER1-208ENST00000493207 ADGRL3Q9HAR2 1447 aa24.09■■□□□ 1.45
RER1-208ENST00000493207 TOM1O60784 492 aa24.07■■□□□ 1.44
RER1-208ENST00000493207 FBXO41Q8TF61 875 aa24.07■■□□□ 1.44
RER1-208ENST00000493207 C19orf44Q9H6X5 657 aa24.07■■□□□ 1.44
RER1-208ENST00000493207 RALGAPBQ86X10 1494 aa24.07■■□□□ 1.44
RER1-208ENST00000493207 SIRT1Q96EB6 747 aa24.06■■□□□ 1.44
RER1-208ENST00000493207 PRAM1Q96QH2 718 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms