RNA–Protein interactions for RNA: ENST00000493051.1

NPHP1-210, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-210ENST00000493051 E9PCH4 1651 aa13.63□□□□□ -0.23
NPHP1-210ENST00000493051 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
NPHP1-210ENST00000493051 NEURL4Q96JN8 1562 aa13.62□□□□□ -0.23
NPHP1-210ENST00000493051 LTBP4Q8N2S1 1624 aa13.62□□□□□ -0.23
NPHP1-210ENST00000493051 ADGRB3O60242 1522 aa13.61□□□□□ -0.23
NPHP1-210ENST00000493051 HRCP23327 699 aa13.61□□□□□ -0.23
NPHP1-210ENST00000493051 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
NPHP1-210ENST00000493051 RIMS2Q9UQ26 1411 aa13.6□□□□□ -0.23
NPHP1-210ENST00000493051 POLR1AO95602 1720 aaPredicted RBP13.59□□□□□ -0.23
NPHP1-210ENST00000493051 ZNF326Q5BKZ1 582 aaKnown RBP13.59□□□□□ -0.23
NPHP1-210ENST00000493051 IQSEC2Q5JU85 1478 aa13.59□□□□□ -0.23
NPHP1-210ENST00000493051 ZFYVE9O95405 1425 aa13.58□□□□□ -0.24
NPHP1-210ENST00000493051 TBX22Q9Y458 520 aa13.58□□□□□ -0.24
NPHP1-210ENST00000493051 RAB3GAP2Q9H2M9 1393 aa13.58□□□□□ -0.24
NPHP1-210ENST00000493051 IQGAP1P46940 1657 aa13.57□□□□□ -0.24
NPHP1-210ENST00000493051 CPS1P31327 1500 aa13.57□□□□□ -0.24
NPHP1-210ENST00000493051 TMEM131LA2VDJ0 1609 aa13.57□□□□□ -0.24
NPHP1-210ENST00000493051 PLEKHG1Q9ULL1 1385 aa13.57□□□□□ -0.24
NPHP1-210ENST00000493051 KCNA6P17658 529 aa13.56□□□□□ -0.24
NPHP1-210ENST00000493051 NUTM2DQ5VT03 806 aaPredicted RBP13.56□□□□□ -0.24
NPHP1-210ENST00000493051 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
NPHP1-210ENST00000493051 VGFO15240 615 aaPredicted RBP13.54□□□□□ -0.24
NPHP1-210ENST00000493051 TOM1O60784 492 aa13.54□□□□□ -0.24
NPHP1-210ENST00000493051 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
NPHP1-210ENST00000493051 TRPM2O94759 1503 aa13.54□□□□□ -0.24
NPHP1-210ENST00000493051 PROSER2Q86WR7 435 aaPredicted RBP13.52□□□□□ -0.25
NPHP1-210ENST00000493051 SPHKAPQ2M3C7 1700 aa13.51□□□□□ -0.25
NPHP1-210ENST00000493051 CCDC144AA2RUR9 1427 aa13.51□□□□□ -0.25
NPHP1-210ENST00000493051 PIK3R4Q99570 1358 aa13.49□□□□□ -0.25
NPHP1-210ENST00000493051 RGL3Q3MIN7 710 aa13.49□□□□□ -0.25
NPHP1-210ENST00000493051 LRRC7Q96NW7 1537 aa13.49□□□□□ -0.25
NPHP1-210ENST00000493051 CLTCL1P53675 1640 aa13.47□□□□□ -0.25
NPHP1-210ENST00000493051 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
NPHP1-210ENST00000493051 AMOTL2Q9Y2J4 779 aa13.46□□□□□ -0.25
NPHP1-210ENST00000493051 TMEM94Q12767 1356 aa13.45□□□□□ -0.26
NPHP1-210ENST00000493051 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
NPHP1-210ENST00000493051 PIP4K2BP78356 416 aa13.45□□□□□ -0.26
NPHP1-210ENST00000493051 MYO5BQ9ULV0 1848 aa13.45□□□□□ -0.26
NPHP1-210ENST00000493051 ANKRD30BQ9BXX2 1392 aa13.44□□□□□ -0.26
NPHP1-210ENST00000493051 NKTRP30414 1462 aaKnown RBP13.43□□□□□ -0.26
NPHP1-210ENST00000493051 SPATA31E1Q6ZUB1 1445 aa13.43□□□□□ -0.26
NPHP1-210ENST00000493051 NEXMIFQ5QGS0 1516 aa13.43□□□□□ -0.26
NPHP1-210ENST00000493051 DIP2AQ14689 1571 aa13.42□□□□□ -0.26
NPHP1-210ENST00000493051 NCOA3Q9Y6Q9 1424 aa13.42□□□□□ -0.26
NPHP1-210ENST00000493051 TRIM26Q12899 539 aaPredicted RBP13.42□□□□□ -0.26
NPHP1-210ENST00000493051 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
NPHP1-210ENST00000493051 KIF1BO60333 1816 aa13.41□□□□□ -0.26
NPHP1-210ENST00000493051 STRCP1A6NGW2 1772 aa13.41□□□□□ -0.26
NPHP1-210ENST00000493051 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
NPHP1-210ENST00000493051 C19orf44Q9H6X5 657 aa13.41□□□□□ -0.26
NPHP1-210ENST00000493051 METP08581 1390 aa13.41□□□□□ -0.26
NPHP1-210ENST00000493051 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
NPHP1-210ENST00000493051 STAC3Q96MF2 364 aa13.4□□□□□ -0.26
NPHP1-210ENST00000493051 MSH6P52701 1360 aa13.4□□□□□ -0.26
NPHP1-210ENST00000493051 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
NPHP1-210ENST00000493051 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
NPHP1-210ENST00000493051 NWD1Q149M9 1564 aa13.38□□□□□ -0.27
NPHP1-210ENST00000493051 SLAIN2Q9P270 581 aa13.38□□□□□ -0.27
NPHP1-210ENST00000493051 ATF3P18847 181 aa13.37□□□□□ -0.27
NPHP1-210ENST00000493051 CADPS2Q86UW7 1296 aa13.37□□□□□ -0.27
NPHP1-210ENST00000493051 CHD2O14647 1828 aaKnown RBP13.36□□□□□ -0.27
NPHP1-210ENST00000493051 HSPA1LP34931 641 aa13.36□□□□□ -0.27
NPHP1-210ENST00000493051 DCAF11Q8TEB1 546 aa13.35□□□□□ -0.27
NPHP1-210ENST00000493051 C14orf93Q9H972 538 aaKnown RBP13.35□□□□□ -0.27
NPHP1-210ENST00000493051 FAM135BQ49AJ0 1406 aa13.35□□□□□ -0.27
NPHP1-210ENST00000493051 NRXN3Q9Y4C0 1643 aa13.35□□□□□ -0.27
NPHP1-210ENST00000493051 KDM2AQ9Y2K7 1162 aa13.34□□□□□ -0.27
NPHP1-210ENST00000493051 ALKQ9UM73 1620 aa13.33□□□□□ -0.28
NPHP1-210ENST00000493051 TMEM132EQ6IEE7 984 aa13.32□□□□□ -0.28
NPHP1-210ENST00000493051 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
NPHP1-210ENST00000493051 PIK3C2GO75747 1445 aa13.31□□□□□ -0.28
NPHP1-210ENST00000493051 CFAP70Q5T0N1 1121 aa13.31□□□□□ -0.28
NPHP1-210ENST00000493051 STK26Q9P289 416 aa13.31□□□□□ -0.28
NPHP1-210ENST00000493051 PPLO60437 1756 aa13.3□□□□□ -0.28
NPHP1-210ENST00000493051 SIRT1Q96EB6 747 aa13.3□□□□□ -0.28
NPHP1-210ENST00000493051 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
NPHP1-210ENST00000493051 ABCC11Q96J66 1382 aa13.3□□□□□ -0.28
NPHP1-210ENST00000493051 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
NPHP1-210ENST00000493051 HOXD11P31277 338 aaPredicted RBP13.29□□□□□ -0.28
NPHP1-210ENST00000493051 LRPPRCP42704 1394 aaKnown RBP13.29□□□□□ -0.28
NPHP1-210ENST00000493051 ROBO2Q9HCK4 1378 aa13.29□□□□□ -0.28
NPHP1-210ENST00000493051 DCCP43146 1447 aa13.29□□□□□ -0.28
NPHP1-210ENST00000493051 PTCH1Q13635 1447 aa13.29□□□□□ -0.28
NPHP1-210ENST00000493051 PRAG1Q86YV5 1406 aa13.29□□□□□ -0.28
NPHP1-210ENST00000493051 MYOM2P54296 1465 aa13.29□□□□□ -0.28
NPHP1-210ENST00000493051 NRXN1Q9ULB1 1477 aa13.29□□□□□ -0.28
NPHP1-210ENST00000493051 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.28
NPHP1-210ENST00000493051 ADGRL3Q9HAR2 1447 aa13.27□□□□□ -0.29
NPHP1-210ENST00000493051 WAPLQ7Z5K2 1190 aa13.26□□□□□ -0.29
NPHP1-210ENST00000493051 TECPR2O15040 1411 aa13.25□□□□□ -0.29
NPHP1-210ENST00000493051 YTHDC2Q9H6S0 1430 aaKnown RBP13.25□□□□□ -0.29
NPHP1-210ENST00000493051 SIN3AQ96ST3 1273 aa13.25□□□□□ -0.29
NPHP1-210ENST00000493051 NEUROD1Q13562 356 aa13.24□□□□□ -0.29
NPHP1-210ENST00000493051 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
NPHP1-210ENST00000493051 BRINP3Q76B58 766 aa13.24□□□□□ -0.29
NPHP1-210ENST00000493051 IFT172Q9UG01 1749 aa13.24□□□□□ -0.29
NPHP1-210ENST00000493051 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.23□□□□□ -0.29
NPHP1-210ENST00000493051 L3MBTL2Q969R5 705 aa13.23□□□□□ -0.29
NPHP1-210ENST00000493051 POGKQ9P215 609 aa13.23□□□□□ -0.29
NPHP1-210ENST00000493051 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms