RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 KIF1BO60333 1816 aa13.51□□□□□ -0.25
CSTF1-206ENST00000493039 TMEM2Q9UHN6 1383 aa13.51□□□□□ -0.25
CSTF1-206ENST00000493039 LTKP29376 864 aa13.51□□□□□ -0.25
CSTF1-206ENST00000493039 THEMISQ8N1K5 641 aaPredicted RBP13.51□□□□□ -0.25
CSTF1-206ENST00000493039 ZFYVE9O95405 1425 aa13.5□□□□□ -0.25
CSTF1-206ENST00000493039 MYO5BQ9ULV0 1848 aa13.5□□□□□ -0.25
CSTF1-206ENST00000493039 RPGRIP1LQ68CZ1 1315 aa13.5□□□□□ -0.25
CSTF1-206ENST00000493039 ADGRF5Q8IZF2 1346 aa13.5□□□□□ -0.25
CSTF1-206ENST00000493039 NBPF8Q3BBV2 869 aa13.49□□□□□ -0.25
CSTF1-206ENST00000493039 BCL11AQ9H165 835 aa13.49□□□□□ -0.25
CSTF1-206ENST00000493039 KDM5AP29375 1690 aaKnown RBP13.49□□□□□ -0.25
CSTF1-206ENST00000493039 NEXMIFQ5QGS0 1516 aa13.49□□□□□ -0.25
CSTF1-206ENST00000493039 EIF5BO60841 1220 aaKnown RBP13.49□□□□□ -0.25
CSTF1-206ENST00000493039 LMTK3Q96Q04 1460 aa13.49□□□□□ -0.25
CSTF1-206ENST00000493039 ARHGAP23Q9P227 1491 aa13.49□□□□□ -0.25
CSTF1-206ENST00000493039 ZNF142P52746 1687 aaPredicted RBP13.48□□□□□ -0.25
CSTF1-206ENST00000493039 RIMS2Q9UQ26 1411 aa13.48□□□□□ -0.25
CSTF1-206ENST00000493039 HSPA2P54652 639 aa13.48□□□□□ -0.25
CSTF1-206ENST00000493039 SLIT1O75093 1534 aa13.47□□□□□ -0.25
CSTF1-206ENST00000493039 TXNDC2Q86VQ3 553 aa13.45□□□□□ -0.26
CSTF1-206ENST00000493039 NRXN1Q9ULB1 1477 aa13.45□□□□□ -0.26
CSTF1-206ENST00000493039 VGFO15240 615 aaPredicted RBP13.45□□□□□ -0.26
CSTF1-206ENST00000493039 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
CSTF1-206ENST00000493039 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
CSTF1-206ENST00000493039 IFT172Q9UG01 1749 aa13.45□□□□□ -0.26
CSTF1-206ENST00000493039 PPLO60437 1756 aa13.44□□□□□ -0.26
CSTF1-206ENST00000493039 MYOM2P54296 1465 aa13.44□□□□□ -0.26
CSTF1-206ENST00000493039 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
CSTF1-206ENST00000493039 ZEB1P37275 1124 aaPredicted RBP13.44□□□□□ -0.26
CSTF1-206ENST00000493039 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.43□□□□□ -0.26
CSTF1-206ENST00000493039 PIK3C2GO75747 1445 aa13.42□□□□□ -0.26
CSTF1-206ENST00000493039 ANKLE2Q86XL3 938 aa13.42□□□□□ -0.26
CSTF1-206ENST00000493039 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
CSTF1-206ENST00000493039 NBPF1Q3BBV0 1214 aa13.41□□□□□ -0.26
CSTF1-206ENST00000493039 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
CSTF1-206ENST00000493039 HDGFP51858 240 aaKnown RBP13.41□□□□□ -0.26
CSTF1-206ENST00000493039 C14orf93Q9H972 538 aaKnown RBP13.41□□□□□ -0.26
CSTF1-206ENST00000493039 EID1Q9Y6B2 187 aa13.41□□□□□ -0.26
CSTF1-206ENST00000493039 SCAF11Q99590 1463 aaKnown RBP13.41□□□□□ -0.26
CSTF1-206ENST00000493039 PLEKHG1Q9ULL1 1385 aa13.4□□□□□ -0.27
CSTF1-206ENST00000493039 ADAMTS13Q76LX8 1427 aa13.39□□□□□ -0.27
CSTF1-206ENST00000493039 NRXN3Q9Y4C0 1643 aa13.38□□□□□ -0.27
CSTF1-206ENST00000493039 SLC26A8Q96RN1 970 aa13.37□□□□□ -0.27
CSTF1-206ENST00000493039 MED14O60244 1454 aa13.37□□□□□ -0.27
CSTF1-206ENST00000493039 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
CSTF1-206ENST00000493039 SETBP1Q9Y6X0 1596 aa13.36□□□□□ -0.27
CSTF1-206ENST00000493039 ALKQ9UM73 1620 aa13.35□□□□□ -0.27
CSTF1-206ENST00000493039 METP08581 1390 aa13.35□□□□□ -0.27
CSTF1-206ENST00000493039 RALGAPBQ86X10 1494 aa13.35□□□□□ -0.27
CSTF1-206ENST00000493039 GPRASP1Q5JY77 1395 aa13.35□□□□□ -0.27
CSTF1-206ENST00000493039 NPHP4O75161 1426 aaPredicted RBP13.35□□□□□ -0.27
CSTF1-206ENST00000493039 TBX22Q9Y458 520 aa13.35□□□□□ -0.27
CSTF1-206ENST00000493039 ADGRB1O14514 1584 aa13.34□□□□□ -0.27
CSTF1-206ENST00000493039 STRCQ7RTU9 1775 aa13.34□□□□□ -0.27
CSTF1-206ENST00000493039 AEBP2Q6ZN18 517 aaPredicted RBP13.34□□□□□ -0.27
CSTF1-206ENST00000493039 TRPM1Q7Z4N2 1603 aa13.34□□□□□ -0.27
CSTF1-206ENST00000493039 ASXL1Q8IXJ9 1541 aa13.34□□□□□ -0.27
CSTF1-206ENST00000493039 BCANQ96GW7 911 aa13.33□□□□□ -0.27
CSTF1-206ENST00000493039 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.27
CSTF1-206ENST00000493039 ROCK2O75116 1388 aaKnown RBP13.33□□□□□ -0.28
CSTF1-206ENST00000493039 IQGAP1P46940 1657 aa13.33□□□□□ -0.28
CSTF1-206ENST00000493039 SETD1AO15047 1707 aaKnown RBP13.32□□□□□ -0.28
CSTF1-206ENST00000493039 CARD11Q9BXL7 1154 aa13.31□□□□□ -0.28
CSTF1-206ENST00000493039 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
CSTF1-206ENST00000493039 POLR1AO95602 1720 aaPredicted RBP13.3□□□□□ -0.28
CSTF1-206ENST00000493039 KIAA1210Q9ULL0 1709 aa13.3□□□□□ -0.28
CSTF1-206ENST00000493039 ARXQ96QS3 562 aa13.28□□□□□ -0.28
CSTF1-206ENST00000493039 STK26Q9P289 416 aa13.28□□□□□ -0.28
CSTF1-206ENST00000493039 YTHDC2Q9H6S0 1430 aaKnown RBP13.28□□□□□ -0.28
CSTF1-206ENST00000493039 TRAK1Q9UPV9 953 aa13.27□□□□□ -0.28
CSTF1-206ENST00000493039 LAMC1P11047 1609 aa13.27□□□□□ -0.29
CSTF1-206ENST00000493039 LRPPRCP42704 1394 aaKnown RBP13.27□□□□□ -0.29
CSTF1-206ENST00000493039 ABCC11Q96J66 1382 aa13.26□□□□□ -0.29
CSTF1-206ENST00000493039 HIRIP3Q9BW71 556 aaPredicted RBP13.26□□□□□ -0.29
CSTF1-206ENST00000493039 AMOTL2Q9Y2J4 779 aa13.26□□□□□ -0.29
CSTF1-206ENST00000493039 DIP2AQ14689 1571 aa13.26□□□□□ -0.29
CSTF1-206ENST00000493039 PIK3R4Q99570 1358 aa13.26□□□□□ -0.29
CSTF1-206ENST00000493039 USP47Q96K76 1375 aa13.25□□□□□ -0.29
CSTF1-206ENST00000493039 HSPA5P11021 654 aaKnown RBP13.25□□□□□ -0.29
CSTF1-206ENST00000493039 KCNA6P17658 529 aa13.25□□□□□ -0.29
CSTF1-206ENST00000493039 ST20-MTHFSA0A0A6YYL1 179 aa13.24□□□□□ -0.29
CSTF1-206ENST00000493039 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
CSTF1-206ENST00000493039 TECPR2O15040 1411 aa13.24□□□□□ -0.29
CSTF1-206ENST00000493039 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
CSTF1-206ENST00000493039 EIF4G2P78344 907 aaKnown RBP eCLIP13.23□□□□□ -0.29
CSTF1-206ENST00000493039 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
CSTF1-206ENST00000493039 PLEKHH1Q9ULM0 1364 aa13.23□□□□□ -0.29
CSTF1-206ENST00000493039 SIRT1Q96EB6 747 aa13.22□□□□□ -0.29
CSTF1-206ENST00000493039 TESK2Q96S53 571 aa13.22□□□□□ -0.29
CSTF1-206ENST00000493039 ZNF335Q9H4Z2 1342 aaPredicted RBP13.22□□□□□ -0.29
CSTF1-206ENST00000493039 PRAM1Q96QH2 718 aa13.21□□□□□ -0.29
CSTF1-206ENST00000493039 CHD2O14647 1828 aaKnown RBP13.2□□□□□ -0.3
CSTF1-206ENST00000493039 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
CSTF1-206ENST00000493039 XRN1Q8IZH2 1706 aaKnown RBP13.2□□□□□ -0.3
CSTF1-206ENST00000493039 SAFB2Q14151 953 aaKnown RBP eCLIP13.2□□□□□ -0.3
CSTF1-206ENST00000493039 DLC1Q96QB1 1528 aa13.19□□□□□ -0.3
CSTF1-206ENST00000493039 FAM135BQ49AJ0 1406 aa13.19□□□□□ -0.3
CSTF1-206ENST00000493039 C11orf95C9JLR9 678 aaPredicted RBP13.19□□□□□ -0.3
CSTF1-206ENST00000493039 STRCP1A6NGW2 1772 aa13.19□□□□□ -0.3
CSTF1-206ENST00000493039 PTCH1Q13635 1447 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms