RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 CHIC2Q9UKJ5 165 aa17.21■□□□□ 0.35
SND1-215ENST00000492772 MSH6P52701 1360 aa17.2■□□□□ 0.34
SND1-215ENST00000492772 MYO5BQ9ULV0 1848 aa17.2■□□□□ 0.34
SND1-215ENST00000492772 PHLPP1O60346 1717 aa17.2■□□□□ 0.34
SND1-215ENST00000492772 ZFYVE9O95405 1425 aa17.19■□□□□ 0.34
SND1-215ENST00000492772 CHD2O14647 1828 aaKnown RBP17.19■□□□□ 0.34
SND1-215ENST00000492772 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
SND1-215ENST00000492772 TMEM131LA2VDJ0 1609 aa17.17■□□□□ 0.34
SND1-215ENST00000492772 ANKRD50Q9ULJ7 1429 aa17.16■□□□□ 0.34
SND1-215ENST00000492772 UNC13BO14795 1591 aa17.15■□□□□ 0.34
SND1-215ENST00000492772 BCANQ96GW7 911 aa17.15■□□□□ 0.34
SND1-215ENST00000492772 DIP2AQ14689 1571 aa17.15■□□□□ 0.34
SND1-215ENST00000492772 RIMS2Q9UQ26 1411 aa17.14■□□□□ 0.33
SND1-215ENST00000492772 RBM33Q96EV2 1170 aaKnown RBP17.14■□□□□ 0.33
SND1-215ENST00000492772 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
SND1-215ENST00000492772 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
SND1-215ENST00000492772 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
SND1-215ENST00000492772 POTEAQ6S8J7 498 aa17.13■□□□□ 0.33
SND1-215ENST00000492772 JCADQ9P266 1359 aa17.13■□□□□ 0.33
SND1-215ENST00000492772 NCOA3Q9Y6Q9 1424 aa17.13■□□□□ 0.33
SND1-215ENST00000492772 SLAIN2Q9P270 581 aa17.12■□□□□ 0.33
SND1-215ENST00000492772 E9PCH4 1651 aa17.1■□□□□ 0.33
SND1-215ENST00000492772 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
SND1-215ENST00000492772 FAM50AQ14320 339 aaKnown RBP17.09■□□□□ 0.33
SND1-215ENST00000492772 IQGAP3Q86VI3 1631 aa17.09■□□□□ 0.33
SND1-215ENST00000492772 AHDC1Q5TGY3 1603 aaPredicted RBP17.08■□□□□ 0.32
SND1-215ENST00000492772 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.08■□□□□ 0.32
SND1-215ENST00000492772 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.07■□□□□ 0.32
SND1-215ENST00000492772 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
SND1-215ENST00000492772 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
SND1-215ENST00000492772 TBX22Q9Y458 520 aa17.07■□□□□ 0.32
SND1-215ENST00000492772 TRPM2O94759 1503 aa17.06■□□□□ 0.32
SND1-215ENST00000492772 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
SND1-215ENST00000492772 SPATA31A6Q5VVP1 1343 aa17.04■□□□□ 0.32
SND1-215ENST00000492772 C14orf37Q86TY3 774 aa17.04■□□□□ 0.32
SND1-215ENST00000492772 LRP6O75581 1613 aa17.03■□□□□ 0.32
SND1-215ENST00000492772 ROCK1Q13464 1354 aa17.02■□□□□ 0.32
SND1-215ENST00000492772 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.32
SND1-215ENST00000492772 CADPS2Q86UW7 1296 aa17.02■□□□□ 0.32
SND1-215ENST00000492772 ATF3P18847 181 aa17■□□□□ 0.31
SND1-215ENST00000492772 DCCP43146 1447 aa17■□□□□ 0.31
SND1-215ENST00000492772 XRN1Q8IZH2 1706 aaKnown RBP17■□□□□ 0.31
SND1-215ENST00000492772 C19orf44Q9H6X5 657 aa17■□□□□ 0.31
SND1-215ENST00000492772 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
SND1-215ENST00000492772 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
SND1-215ENST00000492772 SPHKAPQ2M3C7 1700 aa16.98■□□□□ 0.31
SND1-215ENST00000492772 SETBP1Q9Y6X0 1596 aa16.98■□□□□ 0.31
SND1-215ENST00000492772 NRXN3Q9Y4C0 1643 aa16.97■□□□□ 0.31
SND1-215ENST00000492772 NUTM2DQ5VT03 806 aaPredicted RBP16.96■□□□□ 0.31
SND1-215ENST00000492772 NHSL1Q5SYE7 1610 aa16.96■□□□□ 0.3
SND1-215ENST00000492772 ASXL1Q8IXJ9 1541 aa16.96■□□□□ 0.3
SND1-215ENST00000492772 PTPRUQ92729 1446 aa16.96■□□□□ 0.3
SND1-215ENST00000492772 NUP155O75694 1391 aa16.95■□□□□ 0.3
SND1-215ENST00000492772 AMOTL2Q9Y2J4 779 aa16.94■□□□□ 0.3
SND1-215ENST00000492772 BRINP3Q76B58 766 aa16.93■□□□□ 0.3
SND1-215ENST00000492772 CDK12Q9NYV4 1490 aaPredicted RBP16.93■□□□□ 0.3
SND1-215ENST00000492772 MST1RQ04912 1400 aa16.91■□□□□ 0.3
SND1-215ENST00000492772 SETD5Q9C0A6 1442 aa16.91■□□□□ 0.3
SND1-215ENST00000492772 TRIM52Q96A61 297 aa16.89■□□□□ 0.29
SND1-215ENST00000492772 NALCNQ8IZF0 1738 aa16.89■□□□□ 0.29
SND1-215ENST00000492772 ADGRL3Q9HAR2 1447 aa16.88■□□□□ 0.29
SND1-215ENST00000492772 UPF1Q92900 1129 aaKnown RBP eCLIP16.88■□□□□ 0.29
SND1-215ENST00000492772 NEXMIFQ5QGS0 1516 aa16.87■□□□□ 0.29
SND1-215ENST00000492772 RXRBP28702 533 aa16.87■□□□□ 0.29
SND1-215ENST00000492772 CLTCL1P53675 1640 aa16.87■□□□□ 0.29
SND1-215ENST00000492772 NUTM2BA6NNL0 878 aaPredicted RBP16.86■□□□□ 0.29
SND1-215ENST00000492772 NUTM2EB1AL46 878 aaPredicted RBP16.86■□□□□ 0.29
SND1-215ENST00000492772 NUTM2AQ8IVF1 878 aaPredicted RBP16.86■□□□□ 0.29
SND1-215ENST00000492772 KIF1BO60333 1816 aa16.85■□□□□ 0.29
SND1-215ENST00000492772 ZNF326Q5BKZ1 582 aaKnown RBP16.85■□□□□ 0.29
SND1-215ENST00000492772 METP08581 1390 aa16.85■□□□□ 0.29
SND1-215ENST00000492772 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
SND1-215ENST00000492772 AFF2P51816 1311 aa16.84■□□□□ 0.29
SND1-215ENST00000492772 LAMC1P11047 1609 aa16.84■□□□□ 0.29
SND1-215ENST00000492772 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.28
SND1-215ENST00000492772 ITGAEP38570 1179 aa16.82■□□□□ 0.28
SND1-215ENST00000492772 PTCH1Q13635 1447 aa16.81■□□□□ 0.28
SND1-215ENST00000492772 RGS12O14924 1447 aa16.8■□□□□ 0.28
SND1-215ENST00000492772 C1orf167Q5SNV9 1468 aa16.79■□□□□ 0.28
SND1-215ENST00000492772 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
SND1-215ENST00000492772 C8orf37Q96NL8 207 aa16.78■□□□□ 0.28
SND1-215ENST00000492772 RBM6P78332 1123 aaKnown RBP16.76■□□□□ 0.27
SND1-215ENST00000492772 DDX17Q92841 729 aaKnown RBP16.75■□□□□ 0.27
SND1-215ENST00000492772 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
SND1-215ENST00000492772 QTRT2Q9H974 415 aaKnown RBP16.74■□□□□ 0.27
SND1-215ENST00000492772 PPLO60437 1756 aa16.73■□□□□ 0.27
SND1-215ENST00000492772 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
SND1-215ENST00000492772 VGFO15240 615 aaPredicted RBP16.72■□□□□ 0.27
SND1-215ENST00000492772 NGLY1Q96IV0 654 aa16.72■□□□□ 0.27
SND1-215ENST00000492772 ROBO2Q9HCK4 1378 aa16.72■□□□□ 0.27
SND1-215ENST00000492772 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
SND1-215ENST00000492772 SOS2Q07890 1332 aaPredicted RBP16.71■□□□□ 0.27
SND1-215ENST00000492772 NAIPQ13075 1403 aa16.71■□□□□ 0.27
SND1-215ENST00000492772 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
SND1-215ENST00000492772 ATAD2Q6PL18 1390 aa16.7■□□□□ 0.26
SND1-215ENST00000492772 ADAMTS2O95450 1211 aa16.7■□□□□ 0.26
SND1-215ENST00000492772 RPGRIP1LQ68CZ1 1315 aa16.69■□□□□ 0.26
SND1-215ENST00000492772 MARF1Q9Y4F3 1742 aaKnown RBP16.68■□□□□ 0.26
SND1-215ENST00000492772 ORAI2Q96SN7 254 aa16.67■□□□□ 0.26
SND1-215ENST00000492772 MYOM2P54296 1465 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms