RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 PTPRMP28827 1452 aa19.58■□□□□ 0.72
PTPRE-210ENST00000492479 LAMC1P11047 1609 aa19.58■□□□□ 0.72
PTPRE-210ENST00000492479 RGL3Q3MIN7 710 aa19.56■□□□□ 0.72
PTPRE-210ENST00000492479 GPRASP1Q5JY77 1395 aa19.56■□□□□ 0.72
PTPRE-210ENST00000492479 CEBPAP49715 358 aaPredicted RBP19.54■□□□□ 0.72
PTPRE-210ENST00000492479 PIK3C2GO75747 1445 aa19.53■□□□□ 0.72
PTPRE-210ENST00000492479 CEP170BQ9Y4F5 1589 aaPredicted RBP19.53■□□□□ 0.72
PTPRE-210ENST00000492479 SLIT1O75093 1534 aa19.52■□□□□ 0.72
PTPRE-210ENST00000492479 ARHGAP23Q9P227 1491 aa19.52■□□□□ 0.72
PTPRE-210ENST00000492479 SETBP1Q9Y6X0 1596 aa19.49■□□□□ 0.71
PTPRE-210ENST00000492479 VGFO15240 615 aaPredicted RBP19.49■□□□□ 0.71
PTPRE-210ENST00000492479 TMEM2Q9UHN6 1383 aa19.48■□□□□ 0.71
PTPRE-210ENST00000492479 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
PTPRE-210ENST00000492479 RIMS2Q9UQ26 1411 aa19.48■□□□□ 0.71
PTPRE-210ENST00000492479 CHGAP10645 457 aaKnown RBP19.47■□□□□ 0.71
PTPRE-210ENST00000492479 ZNF326Q5BKZ1 582 aaKnown RBP19.47■□□□□ 0.71
PTPRE-210ENST00000492479 ADGRF5Q8IZF2 1346 aa19.47■□□□□ 0.71
PTPRE-210ENST00000492479 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.44■□□□□ 0.7
PTPRE-210ENST00000492479 STAG3Q9UJ98 1225 aa19.44■□□□□ 0.7
PTPRE-210ENST00000492479 ADGRB1O14514 1584 aa19.44■□□□□ 0.7
PTPRE-210ENST00000492479 IQGAP1P46940 1657 aa19.43■□□□□ 0.7
PTPRE-210ENST00000492479 ROCK2O75116 1388 aaKnown RBP19.43■□□□□ 0.7
PTPRE-210ENST00000492479 KDM4FA0A1W2PPD8 638 aa19.42■□□□□ 0.7
PTPRE-210ENST00000492479 HDGFP51858 240 aaKnown RBP19.42■□□□□ 0.7
PTPRE-210ENST00000492479 C14orf93Q9H972 538 aaKnown RBP19.42■□□□□ 0.7
PTPRE-210ENST00000492479 NRXN3Q9Y4C0 1643 aa19.42■□□□□ 0.7
PTPRE-210ENST00000492479 SETD1AO15047 1707 aaKnown RBP19.42■□□□□ 0.7
PTPRE-210ENST00000492479 THEMISQ8N1K5 641 aaPredicted RBP19.41■□□□□ 0.7
PTPRE-210ENST00000492479 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
PTPRE-210ENST00000492479 EIF4G2P78344 907 aaKnown RBP eCLIP19.38■□□□□ 0.69
PTPRE-210ENST00000492479 USP47Q96K76 1375 aa19.38■□□□□ 0.69
PTPRE-210ENST00000492479 PLEKHG1Q9ULL1 1385 aa19.38■□□□□ 0.69
PTPRE-210ENST00000492479 ALKQ9UM73 1620 aa19.37■□□□□ 0.69
PTPRE-210ENST00000492479 SCAF11Q99590 1463 aaKnown RBP19.37■□□□□ 0.69
PTPRE-210ENST00000492479 NBPF1Q3BBV0 1214 aa19.37■□□□□ 0.69
PTPRE-210ENST00000492479 ASXL1Q8IXJ9 1541 aa19.36■□□□□ 0.69
PTPRE-210ENST00000492479 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
PTPRE-210ENST00000492479 MED14O60244 1454 aa19.35■□□□□ 0.69
PTPRE-210ENST00000492479 CFAP70Q5T0N1 1121 aa19.35■□□□□ 0.69
PTPRE-210ENST00000492479 DIP2AQ14689 1571 aa19.35■□□□□ 0.69
PTPRE-210ENST00000492479 HSPA5P11021 654 aaKnown RBP19.33■□□□□ 0.68
PTPRE-210ENST00000492479 POLR1AO95602 1720 aaPredicted RBP19.33■□□□□ 0.68
PTPRE-210ENST00000492479 ADAMTS13Q76LX8 1427 aa19.32■□□□□ 0.68
PTPRE-210ENST00000492479 LTKP29376 864 aa19.31■□□□□ 0.68
PTPRE-210ENST00000492479 EID1Q9Y6B2 187 aa19.31■□□□□ 0.68
PTPRE-210ENST00000492479 KNDC1Q76NI1 1749 aa19.29■□□□□ 0.68
PTPRE-210ENST00000492479 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
PTPRE-210ENST00000492479 DLC1Q96QB1 1528 aa19.29■□□□□ 0.68
PTPRE-210ENST00000492479 EIF3AQ14152 1382 aaKnown RBP19.29■□□□□ 0.68
PTPRE-210ENST00000492479 SBNO2Q9Y2G9 1366 aa19.29■□□□□ 0.68
PTPRE-210ENST00000492479 ARHGEF28Q8N1W1 1705 aaKnown RBP19.28■□□□□ 0.68
PTPRE-210ENST00000492479 NUTM2DQ5VT03 806 aaPredicted RBP19.28■□□□□ 0.68
PTPRE-210ENST00000492479 TXNDC2Q86VQ3 553 aa19.28■□□□□ 0.68
PTPRE-210ENST00000492479 TECPR2O15040 1411 aa19.27■□□□□ 0.68
PTPRE-210ENST00000492479 LMTK3Q96Q04 1460 aa19.26■□□□□ 0.67
PTPRE-210ENST00000492479 YTHDC2Q9H6S0 1430 aaKnown RBP19.25■□□□□ 0.67
PTPRE-210ENST00000492479 LRPPRCP42704 1394 aaKnown RBP19.25■□□□□ 0.67
PTPRE-210ENST00000492479 ABCC11Q96J66 1382 aa19.24■□□□□ 0.67
PTPRE-210ENST00000492479 PIK3R4Q99570 1358 aa19.24■□□□□ 0.67
PTPRE-210ENST00000492479 ANKLE2Q86XL3 938 aa19.24■□□□□ 0.67
PTPRE-210ENST00000492479 TBX22Q9Y458 520 aa19.24■□□□□ 0.67
PTPRE-210ENST00000492479 ST20-MTHFSA0A0A6YYL1 179 aa19.23■□□□□ 0.67
PTPRE-210ENST00000492479 SLC24A1O60721 1099 aa19.23■□□□□ 0.67
PTPRE-210ENST00000492479 TESK2Q96S53 571 aa19.23■□□□□ 0.67
PTPRE-210ENST00000492479 CPS1P31327 1500 aa19.23■□□□□ 0.67
PTPRE-210ENST00000492479 METP08581 1390 aa19.21■□□□□ 0.67
PTPRE-210ENST00000492479 SIRT1Q96EB6 747 aa19.21■□□□□ 0.67
PTPRE-210ENST00000492479 XRN1Q8IZH2 1706 aaKnown RBP19.2■□□□□ 0.66
PTPRE-210ENST00000492479 NPHP4O75161 1426 aaPredicted RBP19.19■□□□□ 0.66
PTPRE-210ENST00000492479 FAM135BQ49AJ0 1406 aa19.19■□□□□ 0.66
PTPRE-210ENST00000492479 TMEM132EQ6IEE7 984 aa19.19■□□□□ 0.66
PTPRE-210ENST00000492479 QRICH2Q9H0J4 1663 aa19.19■□□□□ 0.66
PTPRE-210ENST00000492479 CCDC7Q96M83 1385 aa19.18■□□□□ 0.66
PTPRE-210ENST00000492479 PTCH1Q13635 1447 aa19.17■□□□□ 0.66
PTPRE-210ENST00000492479 HIRIP3Q9BW71 556 aaPredicted RBP19.16■□□□□ 0.66
PTPRE-210ENST00000492479 WASHC2AQ641Q2 1341 aa19.16■□□□□ 0.66
PTPRE-210ENST00000492479 CENPJQ9HC77 1338 aaPredicted RBP19.16■□□□□ 0.66
PTPRE-210ENST00000492479 CHD2O14647 1828 aaKnown RBP19.16■□□□□ 0.66
PTPRE-210ENST00000492479 C11orf95C9JLR9 678 aaPredicted RBP19.14■□□□□ 0.65
PTPRE-210ENST00000492479 PTPRUQ92729 1446 aa19.14■□□□□ 0.65
PTPRE-210ENST00000492479 NWD1Q149M9 1564 aa19.14■□□□□ 0.65
PTPRE-210ENST00000492479 TRAK1Q9UPV9 953 aa19.13■□□□□ 0.65
PTPRE-210ENST00000492479 KIF7Q2M1P5 1343 aa19.13■□□□□ 0.65
PTPRE-210ENST00000492479 STRCQ7RTU9 1775 aa19.13■□□□□ 0.65
PTPRE-210ENST00000492479 PUS7Q96PZ0 661 aaKnown RBP19.11■□□□□ 0.65
PTPRE-210ENST00000492479 ADGRB2O60241 1585 aa19.1■□□□□ 0.65
PTPRE-210ENST00000492479 DISP3Q9P2K9 1392 aa19.1■□□□□ 0.65
PTPRE-210ENST00000492479 TMF1P82094 1093 aa19.1■□□□□ 0.65
PTPRE-210ENST00000492479 SLC26A8Q96RN1 970 aa19.09■□□□□ 0.65
PTPRE-210ENST00000492479 CDCA8Q53HL2 280 aa19.08■□□□□ 0.64
PTPRE-210ENST00000492479 BCANQ96GW7 911 aa19.08■□□□□ 0.64
PTPRE-210ENST00000492479 TULP4Q9NRJ4 1543 aa19.08■□□□□ 0.64
PTPRE-210ENST00000492479 ROBO2Q9HCK4 1378 aa19.07■□□□□ 0.64
PTPRE-210ENST00000492479 NCKAP5LQ9HCH0 1330 aa19.07■□□□□ 0.64
PTPRE-210ENST00000492479 PRAM1Q96QH2 718 aa19.05■□□□□ 0.64
PTPRE-210ENST00000492479 STK26Q9P289 416 aa19.05■□□□□ 0.64
PTPRE-210ENST00000492479 MYOM1P52179 1685 aa19.05■□□□□ 0.64
PTPRE-210ENST00000492479 NKTRP30414 1462 aaKnown RBP19.04■□□□□ 0.64
PTPRE-210ENST00000492479 AMOTL2Q9Y2J4 779 aa19.04■□□□□ 0.64
PTPRE-210ENST00000492479 HSPA2P54652 639 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms