RNA–Protein interactions for RNA: ENST00000492367.1

NUCB1-212, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 1,515 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-212ENST00000492367 EIF4G2P78344 907 aaKnown RBP eCLIP26.93■■□□□ 1.9
NUCB1-212ENST00000492367 ROCK2O75116 1388 aaKnown RBP26.92■■□□□ 1.9
NUCB1-212ENST00000492367 NRXN1Q9ULB1 1477 aa26.92■■□□□ 1.9
NUCB1-212ENST00000492367 A2ML1A8K2U0 1454 aa26.89■■□□□ 1.9
NUCB1-212ENST00000492367 VGFO15240 615 aaPredicted RBP26.89■■□□□ 1.89
NUCB1-212ENST00000492367 GPRASP1Q5JY77 1395 aa26.89■■□□□ 1.89
NUCB1-212ENST00000492367 ZFYVE9O95405 1425 aa26.89■■□□□ 1.89
NUCB1-212ENST00000492367 CARD11Q9BXL7 1154 aa26.88■■□□□ 1.89
NUCB1-212ENST00000492367 CEBPAP49715 358 aaPredicted RBP26.87■■□□□ 1.89
NUCB1-212ENST00000492367 UBR1Q8IWV7 1749 aa26.86■■□□□ 1.89
NUCB1-212ENST00000492367 MYO3AQ8NEV4 1616 aa26.84■■□□□ 1.89
NUCB1-212ENST00000492367 PIK3C2GO75747 1445 aa26.84■■□□□ 1.89
NUCB1-212ENST00000492367 USP47Q96K76 1375 aa26.84■■□□□ 1.89
NUCB1-212ENST00000492367 ADGRF5Q8IZF2 1346 aa26.84■■□□□ 1.89
NUCB1-212ENST00000492367 HSPA5P11021 654 aaKnown RBP26.84■■□□□ 1.89
NUCB1-212ENST00000492367 HDGFP51858 240 aaKnown RBP26.8■■□□□ 1.88
NUCB1-212ENST00000492367 RIMS2Q9UQ26 1411 aa26.8■■□□□ 1.88
NUCB1-212ENST00000492367 PLPPR3Q6T4P5 718 aa26.8■■□□□ 1.88
NUCB1-212ENST00000492367 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.8■■□□□ 1.88
NUCB1-212ENST00000492367 SETBP1Q9Y6X0 1596 aa26.8■■□□□ 1.88
NUCB1-212ENST00000492367 NBPF1Q3BBV0 1214 aa26.77■■□□□ 1.88
NUCB1-212ENST00000492367 IQGAP1P46940 1657 aa26.76■■□□□ 1.87
NUCB1-212ENST00000492367 PTPRMP28827 1452 aa26.75■■□□□ 1.87
NUCB1-212ENST00000492367 ZNF142P52746 1687 aaPredicted RBP26.75■■□□□ 1.87
NUCB1-212ENST00000492367 CEP170BQ9Y4F5 1589 aaPredicted RBP26.75■■□□□ 1.87
NUCB1-212ENST00000492367 SETD1BQ9UPS6 1966 aaKnown RBP26.74■■□□□ 1.87
NUCB1-212ENST00000492367 SCAF11Q99590 1463 aaKnown RBP26.73■■□□□ 1.87
NUCB1-212ENST00000492367 HIRIP3Q9BW71 556 aaPredicted RBP26.73■■□□□ 1.87
NUCB1-212ENST00000492367 C14orf93Q9H972 538 aaKnown RBP26.73■■□□□ 1.87
NUCB1-212ENST00000492367 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
NUCB1-212ENST00000492367 TMEM2Q9UHN6 1383 aa26.72■■□□□ 1.87
NUCB1-212ENST00000492367 CFAP70Q5T0N1 1121 aa26.72■■□□□ 1.87
NUCB1-212ENST00000492367 EIF3AQ14152 1382 aaKnown RBP26.72■■□□□ 1.87
NUCB1-212ENST00000492367 NUTM2DQ5VT03 806 aaPredicted RBP26.7■■□□□ 1.87
NUCB1-212ENST00000492367 SLIT1O75093 1534 aa26.7■■□□□ 1.86
NUCB1-212ENST00000492367 THEMISQ8N1K5 641 aaPredicted RBP26.69■■□□□ 1.86
NUCB1-212ENST00000492367 ARHGAP23Q9P227 1491 aa26.67■■□□□ 1.86
NUCB1-212ENST00000492367 ADGRB1O14514 1584 aa26.66■■□□□ 1.86
NUCB1-212ENST00000492367 DIEXFQ68CQ4 756 aaKnown RBP26.65■■□□□ 1.86
NUCB1-212ENST00000492367 EID1Q9Y6B2 187 aa26.65■■□□□ 1.86
NUCB1-212ENST00000492367 ALKQ9UM73 1620 aa26.64■■□□□ 1.86
NUCB1-212ENST00000492367 ST20-MTHFSA0A0A6YYL1 179 aa26.63■■□□□ 1.85
NUCB1-212ENST00000492367 PLEKHG1Q9ULL1 1385 aa26.59■■□□□ 1.85
NUCB1-212ENST00000492367 NRXN3Q9Y4C0 1643 aa26.59■■□□□ 1.85
NUCB1-212ENST00000492367 SETD1AO15047 1707 aaKnown RBP26.58■■□□□ 1.85
NUCB1-212ENST00000492367 SLC24A1O60721 1099 aa26.58■■□□□ 1.85
NUCB1-212ENST00000492367 TXNDC2Q86VQ3 553 aa26.57■■□□□ 1.84
NUCB1-212ENST00000492367 ASXL1Q8IXJ9 1541 aa26.57■■□□□ 1.84
NUCB1-212ENST00000492367 CCDC7Q96M83 1385 aa26.57■■□□□ 1.84
NUCB1-212ENST00000492367 WASHC2AQ641Q2 1341 aa26.54■■□□□ 1.84
NUCB1-212ENST00000492367 ARHGEF28Q8N1W1 1705 aaKnown RBP26.53■■□□□ 1.84
NUCB1-212ENST00000492367 TMEM132EQ6IEE7 984 aa26.53■■□□□ 1.84
NUCB1-212ENST00000492367 BCANQ96GW7 911 aa26.53■■□□□ 1.84
NUCB1-212ENST00000492367 DIP2AQ14689 1571 aa26.52■■□□□ 1.84
NUCB1-212ENST00000492367 YTHDC2Q9H6S0 1430 aaKnown RBP26.51■■□□□ 1.83
NUCB1-212ENST00000492367 KIF7Q2M1P5 1343 aa26.51■■□□□ 1.83
NUCB1-212ENST00000492367 LTKP29376 864 aa26.5■■□□□ 1.83
NUCB1-212ENST00000492367 TMF1P82094 1093 aa26.5■■□□□ 1.83
NUCB1-212ENST00000492367 SBNO2Q9Y2G9 1366 aa26.5■■□□□ 1.83
NUCB1-212ENST00000492367 TESK2Q96S53 571 aa26.49■■□□□ 1.83
NUCB1-212ENST00000492367 QRICH2Q9H0J4 1663 aa26.49■■□□□ 1.83
NUCB1-212ENST00000492367 DDX10Q13206 875 aaKnown RBP26.49■■□□□ 1.83
NUCB1-212ENST00000492367 TRAK1Q9UPV9 953 aa26.49■■□□□ 1.83
NUCB1-212ENST00000492367 CENPJQ9HC77 1338 aaPredicted RBP26.48■■□□□ 1.83
NUCB1-212ENST00000492367 DLC1Q96QB1 1528 aa26.47■■□□□ 1.83
NUCB1-212ENST00000492367 C11orf95C9JLR9 678 aaPredicted RBP26.47■■□□□ 1.83
NUCB1-212ENST00000492367 ANKLE2Q86XL3 938 aa26.47■■□□□ 1.83
NUCB1-212ENST00000492367 LRPPRCP42704 1394 aaKnown RBP26.47■■□□□ 1.83
NUCB1-212ENST00000492367 KNDC1Q76NI1 1749 aa26.47■■□□□ 1.83
NUCB1-212ENST00000492367 ADAMTS13Q76LX8 1427 aa26.47■■□□□ 1.83
NUCB1-212ENST00000492367 KDM4FA0A1W2PPD8 638 aa26.46■■□□□ 1.83
NUCB1-212ENST00000492367 CDCA8Q53HL2 280 aa26.46■■□□□ 1.83
NUCB1-212ENST00000492367 SENP3Q9H4L4 574 aaPredicted RBP26.46■■□□□ 1.83
NUCB1-212ENST00000492367 MED14O60244 1454 aa26.44■■□□□ 1.82
NUCB1-212ENST00000492367 ABCC11Q96J66 1382 aa26.41■■□□□ 1.82
NUCB1-212ENST00000492367 STK26Q9P289 416 aa26.41■■□□□ 1.82
NUCB1-212ENST00000492367 DISP3Q9P2K9 1392 aa26.41■■□□□ 1.82
NUCB1-212ENST00000492367 POLR3GLQ9BT43 218 aa26.4■■□□□ 1.82
NUCB1-212ENST00000492367 TBX22Q9Y458 520 aa26.4■■□□□ 1.82
NUCB1-212ENST00000492367 METP08581 1390 aa26.4■■□□□ 1.82
NUCB1-212ENST00000492367 TECPR2O15040 1411 aa26.38■■□□□ 1.81
NUCB1-212ENST00000492367 CPS1P31327 1500 aa26.38■■□□□ 1.81
NUCB1-212ENST00000492367 POGKQ9P215 609 aa26.36■■□□□ 1.81
NUCB1-212ENST00000492367 PIK3R4Q99570 1358 aa26.36■■□□□ 1.81
NUCB1-212ENST00000492367 FAM135BQ49AJ0 1406 aa26.35■■□□□ 1.81
NUCB1-212ENST00000492367 SIRT1Q96EB6 747 aa26.34■■□□□ 1.81
NUCB1-212ENST00000492367 NPHP4O75161 1426 aaPredicted RBP26.33■■□□□ 1.81
NUCB1-212ENST00000492367 SLC26A8Q96RN1 970 aa26.33■■□□□ 1.81
NUCB1-212ENST00000492367 PRAM1Q96QH2 718 aa26.32■■□□□ 1.8
NUCB1-212ENST00000492367 EVC2Q86UK5 1308 aa26.31■■□□□ 1.8
NUCB1-212ENST00000492367 PUS7Q96PZ0 661 aaKnown RBP26.29■■□□□ 1.8
NUCB1-212ENST00000492367 XRN1Q8IZH2 1706 aaKnown RBP26.28■■□□□ 1.8
NUCB1-212ENST00000492367 PTCH1Q13635 1447 aa26.26■■□□□ 1.8
NUCB1-212ENST00000492367 TULP4Q9NRJ4 1543 aa26.26■■□□□ 1.79
NUCB1-212ENST00000492367 LMTK3Q96Q04 1460 aa26.26■■□□□ 1.79
NUCB1-212ENST00000492367 ANP32CO43423 234 aa26.25■■□□□ 1.79
NUCB1-212ENST00000492367 PTPRUQ92729 1446 aa26.25■■□□□ 1.79
NUCB1-212ENST00000492367 MYOM1P52179 1685 aa26.25■■□□□ 1.79
NUCB1-212ENST00000492367 SAFB2Q14151 953 aaKnown RBP eCLIP26.24■■□□□ 1.79
NUCB1-212ENST00000492367 CHD2O14647 1828 aaKnown RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms