RNA–Protein interactions for RNA: ENST00000491990.5

NUP188-209, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 381 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-209ENST00000491990 ZFYVE9O95405 1425 aa35.18■■■■□ 3.22
NUP188-209ENST00000491990 KCNA6P17658 529 aa35.17■■■■□ 3.22
NUP188-209ENST00000491990 BCANQ96GW7 911 aa35.17■■■■□ 3.22
NUP188-209ENST00000491990 XIRP1Q702N8 1843 aaKnown RBP35.17■■■■□ 3.22
NUP188-209ENST00000491990 RIMS2Q9UQ26 1411 aa35.16■■■■□ 3.22
NUP188-209ENST00000491990 CHGAP10645 457 aaKnown RBP35.14■■■■□ 3.22
NUP188-209ENST00000491990 PPP1R15AO75807 674 aaPredicted RBP35.13■■■■□ 3.21
NUP188-209ENST00000491990 ILDR2Q71H61 639 aa35.13■■■■□ 3.21
NUP188-209ENST00000491990 PLEKHG1Q9ULL1 1385 aa35.13■■■■□ 3.21
NUP188-209ENST00000491990 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.1■■■■□ 3.21
NUP188-209ENST00000491990 TMEM94Q12767 1356 aa35.08■■■■□ 3.21
NUP188-209ENST00000491990 NWD1Q149M9 1564 aa35.08■■■■□ 3.21
NUP188-209ENST00000491990 NKTRP30414 1462 aaKnown RBP35.07■■■■□ 3.2
NUP188-209ENST00000491990 PROSER2Q86WR7 435 aaPredicted RBP35.06■■■■□ 3.2
NUP188-209ENST00000491990 SENP3Q9H4L4 574 aaPredicted RBP35.04■■■■□ 3.2
NUP188-209ENST00000491990 SPHKAPQ2M3C7 1700 aa35.01■■■■□ 3.2
NUP188-209ENST00000491990 NAIPQ13075 1403 aa35.01■■■■□ 3.2
NUP188-209ENST00000491990 CHD2O14647 1828 aaKnown RBP34.99■■■■□ 3.19
NUP188-209ENST00000491990 TBX22Q9Y458 520 aa34.99■■■■□ 3.19
NUP188-209ENST00000491990 MED1Q15648 1581 aaPredicted RBP34.99■■■■□ 3.19
NUP188-209ENST00000491990 NUTM2DQ5VT03 806 aaPredicted RBP34.96■■■■□ 3.19
NUP188-209ENST00000491990 RBM33Q96EV2 1170 aaKnown RBP34.95■■■■□ 3.19
NUP188-209ENST00000491990 DIP2AQ14689 1571 aa34.94■■■■□ 3.18
NUP188-209ENST00000491990 FAM135BQ49AJ0 1406 aa34.93■■■■□ 3.18
NUP188-209ENST00000491990 ADAMTS13Q76LX8 1427 aa34.92■■■■□ 3.18
NUP188-209ENST00000491990 SOCS7O14512 581 aa34.92■■■■□ 3.18
NUP188-209ENST00000491990 HFM1A2PYH4 1435 aa34.9■■■■□ 3.18
NUP188-209ENST00000491990 MSH6P52701 1360 aa34.9■■■■□ 3.18
NUP188-209ENST00000491990 PIK3R4Q99570 1358 aa34.88■■■■□ 3.17
NUP188-209ENST00000491990 TRPM2O94759 1503 aa34.85■■■■□ 3.17
NUP188-209ENST00000491990 ZNF326Q5BKZ1 582 aaKnown RBP34.84■■■■□ 3.17
NUP188-209ENST00000491990 TRIM52Q96A61 297 aa34.83■■■■□ 3.17
NUP188-209ENST00000491990 ROBO1Q9Y6N7 1651 aa34.82■■■■□ 3.17
NUP188-209ENST00000491990 NCOA3Q9Y6Q9 1424 aa34.82■■■■□ 3.17
NUP188-209ENST00000491990 CLTCL1P53675 1640 aa34.82■■■■□ 3.16
NUP188-209ENST00000491990 PHF23Q9BUL5 403 aaPredicted RBP34.78■■■■□ 3.16
NUP188-209ENST00000491990 KIF1BO60333 1816 aa34.78■■■■□ 3.16
NUP188-209ENST00000491990 SLAIN2Q9P270 581 aa34.77■■■■□ 3.16
NUP188-209ENST00000491990 SETBP1Q9Y6X0 1596 aa34.77■■■■□ 3.16
NUP188-209ENST00000491990 C14orf37Q86TY3 774 aa34.76■■■■□ 3.16
NUP188-209ENST00000491990 NRXN3Q9Y4C0 1643 aa34.75■■■■□ 3.15
NUP188-209ENST00000491990 AMOTL2Q9Y2J4 779 aa34.74■■■■□ 3.15
NUP188-209ENST00000491990 SLC4A1APQ9BWU0 796 aaKnown RBP34.73■■■■□ 3.15
NUP188-209ENST00000491990 PTPRUQ92729 1446 aa34.72■■■■□ 3.15
NUP188-209ENST00000491990 NEXMIFQ5QGS0 1516 aa34.71■■■■□ 3.15
NUP188-209ENST00000491990 C19orf44Q9H6X5 657 aa34.68■■■■□ 3.14
NUP188-209ENST00000491990 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.67■■■■□ 3.14
NUP188-209ENST00000491990 CADPS2Q86UW7 1296 aa34.66■■■■□ 3.14
NUP188-209ENST00000491990 XRN1Q8IZH2 1706 aaKnown RBP34.66■■■■□ 3.14
NUP188-209ENST00000491990 ATF3P18847 181 aa34.64■■■■□ 3.14
NUP188-209ENST00000491990 PHLPP1O60346 1717 aa34.62■■■■□ 3.13
NUP188-209ENST00000491990 METP08581 1390 aa34.62■■■■□ 3.13
NUP188-209ENST00000491990 VGFO15240 615 aaPredicted RBP34.58■■■■□ 3.13
NUP188-209ENST00000491990 RPGRIP1LQ68CZ1 1315 aa34.57■■■■□ 3.13
NUP188-209ENST00000491990 DCCP43146 1447 aa34.55■■■■□ 3.12
NUP188-209ENST00000491990 FOXD1Q16676 465 aa34.52■■■■□ 3.12
NUP188-209ENST00000491990 JCADQ9P266 1359 aa34.51■■■■□ 3.12
NUP188-209ENST00000491990 COL16A1Q07092 1604 aaPredicted RBP34.51■■■■□ 3.11
NUP188-209ENST00000491990 PPLO60437 1756 aa34.49■■■■□ 3.11
NUP188-209ENST00000491990 MPHOSPH9Q99550 1183 aa34.49■■■■□ 3.11
NUP188-209ENST00000491990 RGS17Q9UGC6 210 aaPredicted RBP34.48■■■■□ 3.11
NUP188-209ENST00000491990 AHDC1Q5TGY3 1603 aaPredicted RBP34.48■■■■□ 3.11
NUP188-209ENST00000491990 CCDC144AA2RUR9 1427 aa34.47■■■■□ 3.11
NUP188-209ENST00000491990 ACIN1Q9UKV3 1341 aaKnown RBP34.47■■■■□ 3.11
NUP188-209ENST00000491990 SETD1AO15047 1707 aaKnown RBP34.47■■■■□ 3.11
NUP188-209ENST00000491990 ADGRL3Q9HAR2 1447 aa34.45■■■■□ 3.11
NUP188-209ENST00000491990 BRINP3Q76B58 766 aa34.44■■■■□ 3.1
NUP188-209ENST00000491990 MST1RQ04912 1400 aa34.41■■■■□ 3.1
NUP188-209ENST00000491990 PTCH1Q13635 1447 aa34.41■■■■□ 3.1
NUP188-209ENST00000491990 NALCNQ8IZF0 1738 aa34.4■■■■□ 3.1
NUP188-209ENST00000491990 SETD5Q9C0A6 1442 aa34.38■■■■□ 3.09
NUP188-209ENST00000491990 ASXL1Q8IXJ9 1541 aa34.37■■■■□ 3.09
NUP188-209ENST00000491990 SPATA31E1Q6ZUB1 1445 aa34.36■■■■□ 3.09
NUP188-209ENST00000491990 PRAG1Q86YV5 1406 aa34.36■■■■□ 3.09
NUP188-209ENST00000491990 SPATA31A6Q5VVP1 1343 aa34.35■■■■□ 3.09
NUP188-209ENST00000491990 RGL3Q3MIN7 710 aa34.34■■■■□ 3.09
NUP188-209ENST00000491990 SHPRHQ149N8 1683 aa34.34■■■■□ 3.09
NUP188-209ENST00000491990 ROBO2Q9HCK4 1378 aa34.34■■■■□ 3.09
NUP188-209ENST00000491990 ANKRD30BQ9BXX2 1392 aa34.32■■■■□ 3.08
NUP188-209ENST00000491990 ADGRF5Q8IZF2 1346 aa34.3■■■■□ 3.08
NUP188-209ENST00000491990 NHSL1Q5SYE7 1610 aa34.3■■■■□ 3.08
NUP188-209ENST00000491990 IFT172Q9UG01 1749 aa34.3■■■■□ 3.08
NUP188-209ENST00000491990 POTEAQ6S8J7 498 aa34.3■■■■□ 3.08
NUP188-209ENST00000491990 LRP6O75581 1613 aa34.26■■■■□ 3.07
NUP188-209ENST00000491990 RAB3GAP2Q9H2M9 1393 aa34.24■■■■□ 3.07
NUP188-209ENST00000491990 MEX3CQ5U5Q3 659 aaKnown RBP34.24■■■■□ 3.07
NUP188-209ENST00000491990 C1orf167Q5SNV9 1468 aa34.24■■■■□ 3.07
NUP188-209ENST00000491990 LRRC59Q96AG4 307 aaKnown RBP34.21■■■■□ 3.07
NUP188-209ENST00000491990 PIK3C2GO75747 1445 aa34.19■■■■□ 3.06
NUP188-209ENST00000491990 DDX17Q92841 729 aaKnown RBP34.16■■■■□ 3.06
NUP188-209ENST00000491990 TECPR2O15040 1411 aa34.15■■■■□ 3.06
NUP188-209ENST00000491990 LRPPRCP42704 1394 aaKnown RBP34.15■■■■□ 3.06
NUP188-209ENST00000491990 STK26Q9P289 416 aa34.15■■■■□ 3.06
NUP188-209ENST00000491990 NUTM2BA6NNL0 878 aaPredicted RBP34.14■■■■□ 3.06
NUP188-209ENST00000491990 NUTM2EB1AL46 878 aaPredicted RBP34.14■■■■□ 3.06
NUP188-209ENST00000491990 NUTM2AQ8IVF1 878 aaPredicted RBP34.14■■■■□ 3.06
NUP188-209ENST00000491990 LAMC1P11047 1609 aa34.13■■■■□ 3.05
NUP188-209ENST00000491990 ZNF772Q68DY9 489 aaPredicted RBP34.13■■■■□ 3.05
NUP188-209ENST00000491990 CDC42BPGQ6DT37 1551 aa34.12■■■■□ 3.05
NUP188-209ENST00000491990 ORAI2Q96SN7 254 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms