RNA–Protein interactions for RNA: ENST00000491974.1

SNHG28-202, Transcript of small nucleolar RNA host gene 28, humanhuman

TSL 2

Gene SNHG28, Length 1,064 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-202ENST00000491974 LTKP29376 864 aa23.99■■□□□ 1.43
SNHG28-202ENST00000491974 NCKAP5LQ9HCH0 1330 aa23.99■■□□□ 1.43
SNHG28-202ENST00000491974 SLIT1O75093 1534 aa23.99■■□□□ 1.43
SNHG28-202ENST00000491974 PPP1R15AO75807 674 aaPredicted RBP23.97■■□□□ 1.43
SNHG28-202ENST00000491974 NEURL4Q96JN8 1562 aa23.97■■□□□ 1.43
SNHG28-202ENST00000491974 ZFYVE9O95405 1425 aa23.96■■□□□ 1.43
SNHG28-202ENST00000491974 NUTM2DQ5VT03 806 aaPredicted RBP23.96■■□□□ 1.43
SNHG28-202ENST00000491974 VGFO15240 615 aaPredicted RBP23.95■■□□□ 1.42
SNHG28-202ENST00000491974 KIF1BO60333 1816 aa23.94■■□□□ 1.42
SNHG28-202ENST00000491974 SCAF11Q99590 1463 aaKnown RBP23.93■■□□□ 1.42
SNHG28-202ENST00000491974 DCAF11Q8TEB1 546 aa23.92■■□□□ 1.42
SNHG28-202ENST00000491974 STAC3Q96MF2 364 aa23.92■■□□□ 1.42
SNHG28-202ENST00000491974 L3MBTL2Q969R5 705 aa23.91■■□□□ 1.42
SNHG28-202ENST00000491974 PHF23Q9BUL5 403 aaPredicted RBP23.91■■□□□ 1.42
SNHG28-202ENST00000491974 DMRT2Q9Y5R5 561 aa23.91■■□□□ 1.42
SNHG28-202ENST00000491974 BCANQ96GW7 911 aa23.89■■□□□ 1.41
SNHG28-202ENST00000491974 KDM2AQ9Y2K7 1162 aa23.89■■□□□ 1.41
SNHG28-202ENST00000491974 NEXMIFQ5QGS0 1516 aa23.89■■□□□ 1.41
SNHG28-202ENST00000491974 TONSLQ96HA7 1378 aa23.88■■□□□ 1.41
SNHG28-202ENST00000491974 PLEKHG1Q9ULL1 1385 aa23.88■■□□□ 1.41
SNHG28-202ENST00000491974 NPHP4O75161 1426 aaPredicted RBP23.87■■□□□ 1.41
SNHG28-202ENST00000491974 MED14O60244 1454 aa23.87■■□□□ 1.41
SNHG28-202ENST00000491974 ADGRF5Q8IZF2 1346 aa23.86■■□□□ 1.41
SNHG28-202ENST00000491974 TIMELESSQ9UNS1 1208 aa23.86■■□□□ 1.41
SNHG28-202ENST00000491974 MYO5BQ9ULV0 1848 aa23.86■■□□□ 1.41
SNHG28-202ENST00000491974 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
SNHG28-202ENST00000491974 SLC26A8Q96RN1 970 aa23.81■■□□□ 1.4
SNHG28-202ENST00000491974 MYOM2P54296 1465 aa23.81■■□□□ 1.4
SNHG28-202ENST00000491974 TBX22Q9Y458 520 aa23.8■■□□□ 1.4
SNHG28-202ENST00000491974 STRCQ7RTU9 1775 aa23.8■■□□□ 1.4
SNHG28-202ENST00000491974 NRXN1Q9ULB1 1477 aa23.76■■□□□ 1.39
SNHG28-202ENST00000491974 PPLO60437 1756 aa23.76■■□□□ 1.39
SNHG28-202ENST00000491974 ADAMTS13Q76LX8 1427 aa23.76■■□□□ 1.39
SNHG28-202ENST00000491974 C14orf93Q9H972 538 aaKnown RBP23.75■■□□□ 1.39
SNHG28-202ENST00000491974 POLR1AO95602 1720 aaPredicted RBP23.75■■□□□ 1.39
SNHG28-202ENST00000491974 PIK3C2GO75747 1445 aa23.75■■□□□ 1.39
SNHG28-202ENST00000491974 CFAP70Q5T0N1 1121 aa23.73■■□□□ 1.39
SNHG28-202ENST00000491974 SETBP1Q9Y6X0 1596 aa23.73■■□□□ 1.39
SNHG28-202ENST00000491974 IFT172Q9UG01 1749 aa23.73■■□□□ 1.39
SNHG28-202ENST00000491974 IQGAP1P46940 1657 aa23.71■■□□□ 1.39
SNHG28-202ENST00000491974 PRAG1Q86YV5 1406 aa23.71■■□□□ 1.39
SNHG28-202ENST00000491974 NBPF8Q3BBV2 869 aa23.69■■□□□ 1.38
SNHG28-202ENST00000491974 METP08581 1390 aa23.67■■□□□ 1.38
SNHG28-202ENST00000491974 PIK3R4Q99570 1358 aa23.67■■□□□ 1.38
SNHG28-202ENST00000491974 ALKQ9UM73 1620 aa23.67■■□□□ 1.38
SNHG28-202ENST00000491974 DIP2AQ14689 1571 aa23.66■■□□□ 1.38
SNHG28-202ENST00000491974 KCNA6P17658 529 aa23.66■■□□□ 1.38
SNHG28-202ENST00000491974 TMEM132EQ6IEE7 984 aa23.66■■□□□ 1.38
SNHG28-202ENST00000491974 NRXN3Q9Y4C0 1643 aa23.66■■□□□ 1.38
SNHG28-202ENST00000491974 ZNF335Q9H4Z2 1342 aaPredicted RBP23.64■■□□□ 1.38
SNHG28-202ENST00000491974 AMOTL2Q9Y2J4 779 aa23.63■■□□□ 1.37
SNHG28-202ENST00000491974 NBPF1Q3BBV0 1214 aa23.62■■□□□ 1.37
SNHG28-202ENST00000491974 STK26Q9P289 416 aa23.6■■□□□ 1.37
SNHG28-202ENST00000491974 PTPRUQ92729 1446 aa23.59■■□□□ 1.37
SNHG28-202ENST00000491974 LRPPRCP42704 1394 aaKnown RBP23.58■■□□□ 1.37
SNHG28-202ENST00000491974 ROCK2O75116 1388 aaKnown RBP23.56■■□□□ 1.36
SNHG28-202ENST00000491974 ABCC11Q96J66 1382 aa23.56■■□□□ 1.36
SNHG28-202ENST00000491974 YTHDC2Q9H6S0 1430 aaKnown RBP23.56■■□□□ 1.36
SNHG28-202ENST00000491974 LAMC1P11047 1609 aa23.55■■□□□ 1.36
SNHG28-202ENST00000491974 ADGRB1O14514 1584 aa23.54■■□□□ 1.36
SNHG28-202ENST00000491974 PROSER2Q86WR7 435 aaPredicted RBP23.54■■□□□ 1.36
SNHG28-202ENST00000491974 ASXL1Q8IXJ9 1541 aa23.54■■□□□ 1.36
SNHG28-202ENST00000491974 SIRT1Q96EB6 747 aa23.53■■□□□ 1.36
SNHG28-202ENST00000491974 TRAK1Q9UPV9 953 aa23.53■■□□□ 1.36
SNHG28-202ENST00000491974 SETD1AO15047 1707 aaKnown RBP23.53■■□□□ 1.36
SNHG28-202ENST00000491974 RALGAPBQ86X10 1494 aa23.52■■□□□ 1.36
SNHG28-202ENST00000491974 CARD11Q9BXL7 1154 aa23.52■■□□□ 1.36
SNHG28-202ENST00000491974 GPRASP1Q5JY77 1395 aa23.52■■□□□ 1.36
SNHG28-202ENST00000491974 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
SNHG28-202ENST00000491974 KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
SNHG28-202ENST00000491974 NWD1Q149M9 1564 aa23.49■■□□□ 1.35
SNHG28-202ENST00000491974 ROBO2Q9HCK4 1378 aa23.49■■□□□ 1.35
SNHG28-202ENST00000491974 TECPR2O15040 1411 aa23.49■■□□□ 1.35
SNHG28-202ENST00000491974 NKTRP30414 1462 aaKnown RBP23.49■■□□□ 1.35
SNHG28-202ENST00000491974 CPS1P31327 1500 aa23.49■■□□□ 1.35
SNHG28-202ENST00000491974 TRPM1Q7Z4N2 1603 aa23.48■■□□□ 1.35
SNHG28-202ENST00000491974 PTCH1Q13635 1447 aa23.47■■□□□ 1.35
SNHG28-202ENST00000491974 LTBP4Q8N2S1 1624 aa23.47■■□□□ 1.35
SNHG28-202ENST00000491974 CHD2O14647 1828 aaKnown RBP23.47■■□□□ 1.35
SNHG28-202ENST00000491974 WAPLQ7Z5K2 1190 aa23.46■■□□□ 1.35
SNHG28-202ENST00000491974 RBM33Q96EV2 1170 aaKnown RBP23.46■■□□□ 1.35
SNHG28-202ENST00000491974 PRAM1Q96QH2 718 aa23.46■■□□□ 1.35
SNHG28-202ENST00000491974 POGKQ9P215 609 aa23.46■■□□□ 1.35
SNHG28-202ENST00000491974 TMEM94Q12767 1356 aa23.45■■□□□ 1.34
SNHG28-202ENST00000491974 LRRC7Q96NW7 1537 aa23.44■■□□□ 1.34
SNHG28-202ENST00000491974 FAM135BQ49AJ0 1406 aa23.44■■□□□ 1.34
SNHG28-202ENST00000491974 XRN1Q8IZH2 1706 aaKnown RBP23.44■■□□□ 1.34
SNHG28-202ENST00000491974 NCOA3Q9Y6Q9 1424 aa23.42■■□□□ 1.34
SNHG28-202ENST00000491974 C14orf37Q86TY3 774 aa23.42■■□□□ 1.34
SNHG28-202ENST00000491974 DLC1Q96QB1 1528 aa23.42■■□□□ 1.34
SNHG28-202ENST00000491974 CERKQ8TCT0 537 aa23.41■■□□□ 1.34
SNHG28-202ENST00000491974 STRCP1A6NGW2 1772 aa23.41■■□□□ 1.34
SNHG28-202ENST00000491974 PLEKHH1Q9ULM0 1364 aa23.4■■□□□ 1.34
SNHG28-202ENST00000491974 SAFB2Q14151 953 aaKnown RBP eCLIP23.4■■□□□ 1.34
SNHG28-202ENST00000491974 EIF3AQ14152 1382 aaKnown RBP23.39■■□□□ 1.33
SNHG28-202ENST00000491974 C19orf44Q9H6X5 657 aa23.38■■□□□ 1.33
SNHG28-202ENST00000491974 CENPJQ9HC77 1338 aaPredicted RBP23.37■■□□□ 1.33
SNHG28-202ENST00000491974 KNDC1Q76NI1 1749 aa23.35■■□□□ 1.33
SNHG28-202ENST00000491974 MSH6P52701 1360 aa23.34■■□□□ 1.33
SNHG28-202ENST00000491974 USP47Q96K76 1375 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms