RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 ZFYVE9O95405 1425 aa33.86■■■■□ 3.01
SCN5A-213ENST00000491944 LTKP29376 864 aa33.85■■■■□ 3.01
SCN5A-213ENST00000491944 NEURL4Q96JN8 1562 aa33.83■■■■□ 3.01
SCN5A-213ENST00000491944 HDGFP51858 240 aaKnown RBP33.83■■■■□ 3.01
SCN5A-213ENST00000491944 NUTM2DQ5VT03 806 aaPredicted RBP33.83■■■■□ 3.01
SCN5A-213ENST00000491944 PPP1R15AO75807 674 aaPredicted RBP33.82■■■■□ 3
SCN5A-213ENST00000491944 NEXMIFQ5QGS0 1516 aa33.81■■■■□ 3
SCN5A-213ENST00000491944 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.81■■■■□ 3
SCN5A-213ENST00000491944 SIN3AQ96ST3 1273 aa33.8■■■■□ 3
SCN5A-213ENST00000491944 PPLO60437 1756 aa33.78■■■■□ 3
SCN5A-213ENST00000491944 RPGRIP1LQ68CZ1 1315 aa33.77■■■■□ 3
SCN5A-213ENST00000491944 NEUROD1Q13562 356 aa33.77■■■■□ 3
SCN5A-213ENST00000491944 NPHP4O75161 1426 aaPredicted RBP33.77■■■■□ 3
SCN5A-213ENST00000491944 CCER1Q8TC90 406 aaPredicted RBP33.76■■■■□ 3
SCN5A-213ENST00000491944 IQGAP1P46940 1657 aa33.76■■■□□ 2.99
SCN5A-213ENST00000491944 MED14O60244 1454 aa33.75■■■□□ 2.99
SCN5A-213ENST00000491944 DMRT2Q9Y5R5 561 aa33.74■■■□□ 2.99
SCN5A-213ENST00000491944 IFT172Q9UG01 1749 aa33.74■■■□□ 2.99
SCN5A-213ENST00000491944 SENP3Q9H4L4 574 aaPredicted RBP33.73■■■□□ 2.99
SCN5A-213ENST00000491944 BCANQ96GW7 911 aa33.72■■■□□ 2.99
SCN5A-213ENST00000491944 PLEKHG1Q9ULL1 1385 aa33.7■■■□□ 2.98
SCN5A-213ENST00000491944 VGFO15240 615 aaPredicted RBP33.69■■■□□ 2.98
SCN5A-213ENST00000491944 CLSPNQ9HAW4 1339 aa33.66■■■□□ 2.98
SCN5A-213ENST00000491944 DCAF11Q8TEB1 546 aa33.62■■■□□ 2.97
SCN5A-213ENST00000491944 KDM2AQ9Y2K7 1162 aa33.6■■■□□ 2.97
SCN5A-213ENST00000491944 ADGRF5Q8IZF2 1346 aa33.6■■■□□ 2.97
SCN5A-213ENST00000491944 MYOM2P54296 1465 aa33.6■■■□□ 2.97
SCN5A-213ENST00000491944 SLC26A8Q96RN1 970 aa33.6■■■□□ 2.97
SCN5A-213ENST00000491944 SETBP1Q9Y6X0 1596 aa33.59■■■□□ 2.97
SCN5A-213ENST00000491944 NRXN3Q9Y4C0 1643 aa33.58■■■□□ 2.97
SCN5A-213ENST00000491944 L3MBTL2Q969R5 705 aa33.56■■■□□ 2.96
SCN5A-213ENST00000491944 ADAMTS13Q76LX8 1427 aa33.55■■■□□ 2.96
SCN5A-213ENST00000491944 TONSLQ96HA7 1378 aa33.55■■■□□ 2.96
SCN5A-213ENST00000491944 DIP2AQ14689 1571 aa33.55■■■□□ 2.96
SCN5A-213ENST00000491944 STAC3Q96MF2 364 aa33.52■■■□□ 2.96
SCN5A-213ENST00000491944 NRXN1Q9ULB1 1477 aa33.51■■■□□ 2.96
SCN5A-213ENST00000491944 PIK3C2GO75747 1445 aa33.51■■■□□ 2.95
SCN5A-213ENST00000491944 TBX22Q9Y458 520 aa33.49■■■□□ 2.95
SCN5A-213ENST00000491944 ALKQ9UM73 1620 aa33.49■■■□□ 2.95
SCN5A-213ENST00000491944 ZNF335Q9H4Z2 1342 aaPredicted RBP33.47■■■□□ 2.95
SCN5A-213ENST00000491944 SETD1AO15047 1707 aaKnown RBP33.45■■■□□ 2.95
SCN5A-213ENST00000491944 LAMC1P11047 1609 aa33.42■■■□□ 2.94
SCN5A-213ENST00000491944 METP08581 1390 aa33.4■■■□□ 2.94
SCN5A-213ENST00000491944 CHD2O14647 1828 aaKnown RBP33.4■■■□□ 2.94
SCN5A-213ENST00000491944 PRAG1Q86YV5 1406 aa33.39■■■□□ 2.94
SCN5A-213ENST00000491944 CFAP70Q5T0N1 1121 aa33.39■■■□□ 2.94
SCN5A-213ENST00000491944 STRCP1A6NGW2 1772 aa33.39■■■□□ 2.94
SCN5A-213ENST00000491944 C14orf93Q9H972 538 aaKnown RBP33.38■■■□□ 2.93
SCN5A-213ENST00000491944 PIK3R4Q99570 1358 aa33.38■■■□□ 2.93
SCN5A-213ENST00000491944 KCNA6P17658 529 aa33.35■■■□□ 2.93
SCN5A-213ENST00000491944 NWD1Q149M9 1564 aa33.35■■■□□ 2.93
SCN5A-213ENST00000491944 LTBP4Q8N2S1 1624 aa33.34■■■□□ 2.93
SCN5A-213ENST00000491944 PTPRUQ92729 1446 aa33.33■■■□□ 2.93
SCN5A-213ENST00000491944 TIMELESSQ9UNS1 1208 aa33.33■■■□□ 2.93
SCN5A-213ENST00000491944 ASXL1Q8IXJ9 1541 aa33.32■■■□□ 2.92
SCN5A-213ENST00000491944 TMEM132EQ6IEE7 984 aa33.32■■■□□ 2.92
SCN5A-213ENST00000491944 KIAA1210Q9ULL0 1709 aa33.31■■■□□ 2.92
SCN5A-213ENST00000491944 AMOTL2Q9Y2J4 779 aa33.31■■■□□ 2.92
SCN5A-213ENST00000491944 CPS1P31327 1500 aa33.31■■■□□ 2.92
SCN5A-213ENST00000491944 XRN1Q8IZH2 1706 aaKnown RBP33.3■■■□□ 2.92
SCN5A-213ENST00000491944 NKTRP30414 1462 aaKnown RBP33.27■■■□□ 2.92
SCN5A-213ENST00000491944 NBPF8Q3BBV2 869 aa33.26■■■□□ 2.92
SCN5A-213ENST00000491944 TRPM1Q7Z4N2 1603 aa33.26■■■□□ 2.91
SCN5A-213ENST00000491944 ADGRB1O14514 1584 aa33.25■■■□□ 2.91
SCN5A-213ENST00000491944 STK26Q9P289 416 aa33.24■■■□□ 2.91
SCN5A-213ENST00000491944 YTHDC2Q9H6S0 1430 aaKnown RBP33.23■■■□□ 2.91
SCN5A-213ENST00000491944 LRPPRCP42704 1394 aaKnown RBP33.22■■■□□ 2.91
SCN5A-213ENST00000491944 PROSER2Q86WR7 435 aaPredicted RBP33.21■■■□□ 2.91
SCN5A-213ENST00000491944 LRRC7Q96NW7 1537 aa33.2■■■□□ 2.91
SCN5A-213ENST00000491944 NBPF1Q3BBV0 1214 aa33.2■■■□□ 2.9
SCN5A-213ENST00000491944 KNDC1Q76NI1 1749 aa33.19■■■□□ 2.9
SCN5A-213ENST00000491944 ROCK2O75116 1388 aaKnown RBP33.16■■■□□ 2.9
SCN5A-213ENST00000491944 PTCH1Q13635 1447 aa33.16■■■□□ 2.9
SCN5A-213ENST00000491944 RBM33Q96EV2 1170 aaKnown RBP33.16■■■□□ 2.9
SCN5A-213ENST00000491944 ABCC11Q96J66 1382 aa33.16■■■□□ 2.9
SCN5A-213ENST00000491944 TMEM94Q12767 1356 aa33.15■■■□□ 2.9
SCN5A-213ENST00000491944 ROBO2Q9HCK4 1378 aa33.15■■■□□ 2.9
SCN5A-213ENST00000491944 TECPR2O15040 1411 aa33.15■■■□□ 2.9
SCN5A-213ENST00000491944 XIRP1Q702N8 1843 aaKnown RBP33.14■■■□□ 2.9
SCN5A-213ENST00000491944 CERKQ8TCT0 537 aa33.14■■■□□ 2.9
SCN5A-213ENST00000491944 RALGAPBQ86X10 1494 aa33.14■■■□□ 2.9
SCN5A-213ENST00000491944 TRAK1Q9UPV9 953 aa33.12■■■□□ 2.89
SCN5A-213ENST00000491944 C14orf37Q86TY3 774 aa33.08■■■□□ 2.89
SCN5A-213ENST00000491944 DLC1Q96QB1 1528 aa33.07■■■□□ 2.88
SCN5A-213ENST00000491944 ARHGEF28Q8N1W1 1705 aaKnown RBP33.06■■■□□ 2.88
SCN5A-213ENST00000491944 WAPLQ7Z5K2 1190 aa33.05■■■□□ 2.88
SCN5A-213ENST00000491944 IQSEC2Q5JU85 1478 aa33.05■■■□□ 2.88
SCN5A-213ENST00000491944 FAM135BQ49AJ0 1406 aa33.05■■■□□ 2.88
SCN5A-213ENST00000491944 GPRASP1Q5JY77 1395 aa33.04■■■□□ 2.88
SCN5A-213ENST00000491944 CARD11Q9BXL7 1154 aa33.04■■■□□ 2.88
SCN5A-213ENST00000491944 PRAM1Q96QH2 718 aa33.03■■■□□ 2.88
SCN5A-213ENST00000491944 NCOA3Q9Y6Q9 1424 aa33.03■■■□□ 2.88
SCN5A-213ENST00000491944 PLEKHH1Q9ULM0 1364 aa33.03■■■□□ 2.88
SCN5A-213ENST00000491944 SIRT1Q96EB6 747 aa33.02■■■□□ 2.88
SCN5A-213ENST00000491944 POGKQ9P215 609 aa33.02■■■□□ 2.88
SCN5A-213ENST00000491944 NALCNQ8IZF0 1738 aa33.01■■■□□ 2.87
SCN5A-213ENST00000491944 SAFB2Q14151 953 aaKnown RBP eCLIP33■■■□□ 2.87
SCN5A-213ENST00000491944 MSH6P52701 1360 aa32.99■■■□□ 2.87
SCN5A-213ENST00000491944 ADGRL3Q9HAR2 1447 aa32.98■■■□□ 2.87
SCN5A-213ENST00000491944 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms