RNA–Protein interactions for RNA: ENST00000491896.1

C3orf49-202, Transcript of chromosome 3 open reading frame 49, humanhuman

TSL 2

Gene C3orf49, Length 736 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-202ENST00000491896 ZFYVE9O95405 1425 aa17.92■□□□□ 0.46
C3orf49-202ENST00000491896 HRCP23327 699 aa17.92■□□□□ 0.46
C3orf49-202ENST00000491896 CPS1P31327 1500 aa17.91■□□□□ 0.46
C3orf49-202ENST00000491896 EID1Q9Y6B2 187 aa17.9■□□□□ 0.46
C3orf49-202ENST00000491896 NCKAP5LQ9HCH0 1330 aa17.9■□□□□ 0.46
C3orf49-202ENST00000491896 STAG3Q9UJ98 1225 aa17.89■□□□□ 0.45
C3orf49-202ENST00000491896 CLTCL1P53675 1640 aa17.89■□□□□ 0.45
C3orf49-202ENST00000491896 DIP2AQ14689 1571 aa17.88■□□□□ 0.45
C3orf49-202ENST00000491896 MYO5BQ9ULV0 1848 aa17.87■□□□□ 0.45
C3orf49-202ENST00000491896 HDGFP51858 240 aaKnown RBP17.87■□□□□ 0.45
C3orf49-202ENST00000491896 RAB3GAP2Q9H2M9 1393 aa17.87■□□□□ 0.45
C3orf49-202ENST00000491896 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
C3orf49-202ENST00000491896 KIF1BO60333 1816 aa17.86■□□□□ 0.45
C3orf49-202ENST00000491896 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
C3orf49-202ENST00000491896 PLEKHG1Q9ULL1 1385 aa17.85■□□□□ 0.45
C3orf49-202ENST00000491896 RIMS2Q9UQ26 1411 aa17.84■□□□□ 0.45
C3orf49-202ENST00000491896 TRIM52Q96A61 297 aa17.84■□□□□ 0.45
C3orf49-202ENST00000491896 TXNDC2Q86VQ3 553 aa17.83■□□□□ 0.44
C3orf49-202ENST00000491896 LTKP29376 864 aa17.82■□□□□ 0.44
C3orf49-202ENST00000491896 NWD1Q149M9 1564 aa17.82■□□□□ 0.44
C3orf49-202ENST00000491896 CERKQ8TCT0 537 aa17.81■□□□□ 0.44
C3orf49-202ENST00000491896 SETBP1Q9Y6X0 1596 aa17.81■□□□□ 0.44
C3orf49-202ENST00000491896 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
C3orf49-202ENST00000491896 NKTRP30414 1462 aaKnown RBP17.8■□□□□ 0.44
C3orf49-202ENST00000491896 ZNF335Q9H4Z2 1342 aaPredicted RBP17.79■□□□□ 0.44
C3orf49-202ENST00000491896 NEXMIFQ5QGS0 1516 aa17.79■□□□□ 0.44
C3orf49-202ENST00000491896 MPHOSPH9Q99550 1183 aa17.79■□□□□ 0.44
C3orf49-202ENST00000491896 FBXO41Q8TF61 875 aa17.78■□□□□ 0.44
C3orf49-202ENST00000491896 PIK3R4Q99570 1358 aa17.78■□□□□ 0.44
C3orf49-202ENST00000491896 RPGRIP1LQ68CZ1 1315 aa17.75■□□□□ 0.43
C3orf49-202ENST00000491896 STRCP1A6NGW2 1772 aa17.74■□□□□ 0.43
C3orf49-202ENST00000491896 SPATA31E1Q6ZUB1 1445 aa17.73■□□□□ 0.43
C3orf49-202ENST00000491896 NRXN3Q9Y4C0 1643 aa17.73■□□□□ 0.43
C3orf49-202ENST00000491896 PPP1R15AO75807 674 aaPredicted RBP17.73■□□□□ 0.43
C3orf49-202ENST00000491896 PPLO60437 1756 aa17.73■□□□□ 0.43
C3orf49-202ENST00000491896 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
C3orf49-202ENST00000491896 IFT172Q9UG01 1749 aa17.72■□□□□ 0.43
C3orf49-202ENST00000491896 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
C3orf49-202ENST00000491896 CHD2O14647 1828 aaKnown RBP17.71■□□□□ 0.43
C3orf49-202ENST00000491896 TBX22Q9Y458 520 aa17.71■□□□□ 0.43
C3orf49-202ENST00000491896 LRRC7Q96NW7 1537 aa17.71■□□□□ 0.43
C3orf49-202ENST00000491896 PRAG1Q86YV5 1406 aa17.71■□□□□ 0.43
C3orf49-202ENST00000491896 CHGAP10645 457 aaKnown RBP17.7■□□□□ 0.42
C3orf49-202ENST00000491896 ANKRD30BQ9BXX2 1392 aa17.69■□□□□ 0.42
C3orf49-202ENST00000491896 NCOA3Q9Y6Q9 1424 aa17.69■□□□□ 0.42
C3orf49-202ENST00000491896 XRN1Q8IZH2 1706 aaKnown RBP17.67■□□□□ 0.42
C3orf49-202ENST00000491896 VGFO15240 615 aaPredicted RBP17.67■□□□□ 0.42
C3orf49-202ENST00000491896 KCNA6P17658 529 aa17.67■□□□□ 0.42
C3orf49-202ENST00000491896 MYOM2P54296 1465 aa17.67■□□□□ 0.42
C3orf49-202ENST00000491896 SETD1AO15047 1707 aaKnown RBP17.66■□□□□ 0.42
C3orf49-202ENST00000491896 LAMC1P11047 1609 aa17.65■□□□□ 0.42
C3orf49-202ENST00000491896 ZNF326Q5BKZ1 582 aaKnown RBP17.65■□□□□ 0.42
C3orf49-202ENST00000491896 NRXN1Q9ULB1 1477 aa17.63■□□□□ 0.41
C3orf49-202ENST00000491896 XIRP1Q702N8 1843 aaKnown RBP17.63■□□□□ 0.41
C3orf49-202ENST00000491896 ILDR1Q86SU0 546 aaPredicted RBP17.62■□□□□ 0.41
C3orf49-202ENST00000491896 STAC3Q96MF2 364 aa17.62■□□□□ 0.41
C3orf49-202ENST00000491896 SLC26A8Q96RN1 970 aa17.62■□□□□ 0.41
C3orf49-202ENST00000491896 TRIM26Q12899 539 aaPredicted RBP17.61■□□□□ 0.41
C3orf49-202ENST00000491896 PIK3C2GO75747 1445 aa17.61■□□□□ 0.41
C3orf49-202ENST00000491896 PTCH1Q13635 1447 aa17.61■□□□□ 0.41
C3orf49-202ENST00000491896 ALKQ9UM73 1620 aa17.6■□□□□ 0.41
C3orf49-202ENST00000491896 DCCP43146 1447 aa17.59■□□□□ 0.41
C3orf49-202ENST00000491896 BCANQ96GW7 911 aa17.59■□□□□ 0.41
C3orf49-202ENST00000491896 TMEM94Q12767 1356 aa17.57■□□□□ 0.4
C3orf49-202ENST00000491896 TOM1O60784 492 aa17.57■□□□□ 0.4
C3orf49-202ENST00000491896 KNDC1Q76NI1 1749 aa17.55■□□□□ 0.4
C3orf49-202ENST00000491896 TECPR2O15040 1411 aa17.55■□□□□ 0.4
C3orf49-202ENST00000491896 PTPRUQ92729 1446 aa17.55■□□□□ 0.4
C3orf49-202ENST00000491896 METP08581 1390 aa17.53■□□□□ 0.4
C3orf49-202ENST00000491896 MSH6P52701 1360 aa17.53■□□□□ 0.4
C3orf49-202ENST00000491896 UBAP1LF5GYI3 381 aa17.53■□□□□ 0.4
C3orf49-202ENST00000491896 NUTM2DQ5VT03 806 aaPredicted RBP17.53■□□□□ 0.4
C3orf49-202ENST00000491896 PROSER2Q86WR7 435 aaPredicted RBP17.51■□□□□ 0.39
C3orf49-202ENST00000491896 AMOTL2Q9Y2J4 779 aa17.5■□□□□ 0.39
C3orf49-202ENST00000491896 ASXL1Q8IXJ9 1541 aa17.5■□□□□ 0.39
C3orf49-202ENST00000491896 ADGRL3Q9HAR2 1447 aa17.49■□□□□ 0.39
C3orf49-202ENST00000491896 ADGRF5Q8IZF2 1346 aa17.48■□□□□ 0.39
C3orf49-202ENST00000491896 FAM135BQ49AJ0 1406 aa17.48■□□□□ 0.39
C3orf49-202ENST00000491896 KIAA1210Q9ULL0 1709 aa17.48■□□□□ 0.39
C3orf49-202ENST00000491896 RGL3Q3MIN7 710 aa17.48■□□□□ 0.39
C3orf49-202ENST00000491896 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.47■□□□□ 0.39
C3orf49-202ENST00000491896 LRPPRCP42704 1394 aaKnown RBP17.47■□□□□ 0.39
C3orf49-202ENST00000491896 DHX57Q6P158 1386 aaKnown RBP17.46■□□□□ 0.39
C3orf49-202ENST00000491896 ABCC11Q96J66 1382 aa17.46■□□□□ 0.39
C3orf49-202ENST00000491896 NALCNQ8IZF0 1738 aa17.46■□□□□ 0.39
C3orf49-202ENST00000491896 DLC1Q96QB1 1528 aa17.46■□□□□ 0.39
C3orf49-202ENST00000491896 CDC42BPGQ6DT37 1551 aa17.45■□□□□ 0.38
C3orf49-202ENST00000491896 C19orf44Q9H6X5 657 aa17.45■□□□□ 0.38
C3orf49-202ENST00000491896 ADGRB1O14514 1584 aa17.45■□□□□ 0.38
C3orf49-202ENST00000491896 CADPS2Q86UW7 1296 aa17.44■□□□□ 0.38
C3orf49-202ENST00000491896 C14orf93Q9H972 538 aaKnown RBP17.44■□□□□ 0.38
C3orf49-202ENST00000491896 YTHDC2Q9H6S0 1430 aaKnown RBP17.43■□□□□ 0.38
C3orf49-202ENST00000491896 ROBO1Q9Y6N7 1651 aa17.42■□□□□ 0.38
C3orf49-202ENST00000491896 SIRT1Q96EB6 747 aa17.42■□□□□ 0.38
C3orf49-202ENST00000491896 ROBO2Q9HCK4 1378 aa17.41■□□□□ 0.38
C3orf49-202ENST00000491896 AHDC1Q5TGY3 1603 aaPredicted RBP17.39■□□□□ 0.37
C3orf49-202ENST00000491896 ADGRB2O60241 1585 aa17.38■□□□□ 0.37
C3orf49-202ENST00000491896 ATF3P18847 181 aa17.37■□□□□ 0.37
C3orf49-202ENST00000491896 DCAF11Q8TEB1 546 aa17.37■□□□□ 0.37
C3orf49-202ENST00000491896 MST1RQ04912 1400 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms