RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 TMEM94Q12767 1356 aa22.76■■□□□ 1.23
CDC42SE1-205ENST00000491825 TMEM131LA2VDJ0 1609 aa22.76■■□□□ 1.23
CDC42SE1-205ENST00000491825 KCNA6P17658 529 aa22.76■■□□□ 1.23
CDC42SE1-205ENST00000491825 E9PCH4 1651 aa22.75■■□□□ 1.23
CDC42SE1-205ENST00000491825 PLEKHG1Q9ULL1 1385 aa22.75■■□□□ 1.23
CDC42SE1-205ENST00000491825 NKTRP30414 1462 aaKnown RBP22.74■■□□□ 1.23
CDC42SE1-205ENST00000491825 RIMS2Q9UQ26 1411 aa22.74■■□□□ 1.23
CDC42SE1-205ENST00000491825 NUP155O75694 1391 aa22.7■■□□□ 1.22
CDC42SE1-205ENST00000491825 FAM135BQ49AJ0 1406 aa22.69■■□□□ 1.22
CDC42SE1-205ENST00000491825 MYO5BQ9ULV0 1848 aa22.68■■□□□ 1.22
CDC42SE1-205ENST00000491825 ITGAEP38570 1179 aa22.68■■□□□ 1.22
CDC42SE1-205ENST00000491825 PROSER2Q86WR7 435 aaPredicted RBP22.66■■□□□ 1.22
CDC42SE1-205ENST00000491825 RBM33Q96EV2 1170 aaKnown RBP22.66■■□□□ 1.22
CDC42SE1-205ENST00000491825 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
CDC42SE1-205ENST00000491825 ADAMTS13Q76LX8 1427 aa22.65■■□□□ 1.22
CDC42SE1-205ENST00000491825 PPP1R15AO75807 674 aaPredicted RBP22.64■■□□□ 1.21
CDC42SE1-205ENST00000491825 HDGFP51858 240 aaKnown RBP22.63■■□□□ 1.21
CDC42SE1-205ENST00000491825 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.63■■□□□ 1.21
CDC42SE1-205ENST00000491825 BCANQ96GW7 911 aa22.63■■□□□ 1.21
CDC42SE1-205ENST00000491825 TBX22Q9Y458 520 aa22.63■■□□□ 1.21
CDC42SE1-205ENST00000491825 HFM1A2PYH4 1435 aa22.62■■□□□ 1.21
CDC42SE1-205ENST00000491825 CHGAP10645 457 aaKnown RBP22.61■■□□□ 1.21
CDC42SE1-205ENST00000491825 DIP2AQ14689 1571 aa22.6■■□□□ 1.21
CDC42SE1-205ENST00000491825 CHD2O14647 1828 aaKnown RBP22.6■■□□□ 1.21
CDC42SE1-205ENST00000491825 NAIPQ13075 1403 aa22.59■■□□□ 1.21
CDC42SE1-205ENST00000491825 MSH6P52701 1360 aa22.59■■□□□ 1.21
CDC42SE1-205ENST00000491825 ROBO1Q9Y6N7 1651 aa22.58■■□□□ 1.21
CDC42SE1-205ENST00000491825 NUTM2DQ5VT03 806 aaPredicted RBP22.58■■□□□ 1.21
CDC42SE1-205ENST00000491825 PIK3R4Q99570 1358 aa22.57■■□□□ 1.2
CDC42SE1-205ENST00000491825 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
CDC42SE1-205ENST00000491825 NCOA3Q9Y6Q9 1424 aa22.56■■□□□ 1.2
CDC42SE1-205ENST00000491825 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
CDC42SE1-205ENST00000491825 PTPRUQ92729 1446 aa22.52■■□□□ 1.2
CDC42SE1-205ENST00000491825 TRPM2O94759 1503 aa22.52■■□□□ 1.19
CDC42SE1-205ENST00000491825 NRXN3Q9Y4C0 1643 aa22.51■■□□□ 1.19
CDC42SE1-205ENST00000491825 SLAIN2Q9P270 581 aa22.51■■□□□ 1.19
CDC42SE1-205ENST00000491825 SETBP1Q9Y6X0 1596 aa22.5■■□□□ 1.19
CDC42SE1-205ENST00000491825 RGS17Q9UGC6 210 aaPredicted RBP22.5■■□□□ 1.19
CDC42SE1-205ENST00000491825 CLTCL1P53675 1640 aa22.48■■□□□ 1.19
CDC42SE1-205ENST00000491825 XRN1Q8IZH2 1706 aaKnown RBP22.45■■□□□ 1.19
CDC42SE1-205ENST00000491825 AMOTL2Q9Y2J4 779 aa22.45■■□□□ 1.18
CDC42SE1-205ENST00000491825 NEXMIFQ5QGS0 1516 aa22.45■■□□□ 1.18
CDC42SE1-205ENST00000491825 C19orf44Q9H6X5 657 aa22.44■■□□□ 1.18
CDC42SE1-205ENST00000491825 COL16A1Q07092 1604 aaPredicted RBP22.43■■□□□ 1.18
CDC42SE1-205ENST00000491825 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.43■■□□□ 1.18
CDC42SE1-205ENST00000491825 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
CDC42SE1-205ENST00000491825 METP08581 1390 aa22.42■■□□□ 1.18
CDC42SE1-205ENST00000491825 PHLPP1O60346 1717 aa22.41■■□□□ 1.18
CDC42SE1-205ENST00000491825 ZNF326Q5BKZ1 582 aaKnown RBP22.41■■□□□ 1.18
CDC42SE1-205ENST00000491825 C14orf37Q86TY3 774 aa22.41■■□□□ 1.18
CDC42SE1-205ENST00000491825 CADPS2Q86UW7 1296 aa22.41■■□□□ 1.18
CDC42SE1-205ENST00000491825 DCCP43146 1447 aa22.4■■□□□ 1.18
CDC42SE1-205ENST00000491825 JCADQ9P266 1359 aa22.4■■□□□ 1.18
CDC42SE1-205ENST00000491825 AHDC1Q5TGY3 1603 aaPredicted RBP22.39■■□□□ 1.18
CDC42SE1-205ENST00000491825 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.17
CDC42SE1-205ENST00000491825 ACIN1Q9UKV3 1341 aaKnown RBP22.37■■□□□ 1.17
CDC42SE1-205ENST00000491825 ATF3P18847 181 aa22.37■■□□□ 1.17
CDC42SE1-205ENST00000491825 RAB3GAP2Q9H2M9 1393 aa22.35■■□□□ 1.17
CDC42SE1-205ENST00000491825 POTEAQ6S8J7 498 aa22.34■■□□□ 1.17
CDC42SE1-205ENST00000491825 BRINP3Q76B58 766 aa22.33■■□□□ 1.17
CDC42SE1-205ENST00000491825 TRIM52Q96A61 297 aa22.33■■□□□ 1.17
CDC42SE1-205ENST00000491825 MST1RQ04912 1400 aa22.32■■□□□ 1.16
CDC42SE1-205ENST00000491825 LRP6O75581 1613 aa22.32■■□□□ 1.16
CDC42SE1-205ENST00000491825 SLC4A1APQ9BWU0 796 aaKnown RBP22.32■■□□□ 1.16
CDC42SE1-205ENST00000491825 ADGRL3Q9HAR2 1447 aa22.31■■□□□ 1.16
CDC42SE1-205ENST00000491825 KIF1BO60333 1816 aa22.31■■□□□ 1.16
CDC42SE1-205ENST00000491825 HRCP23327 699 aa22.3■■□□□ 1.16
CDC42SE1-205ENST00000491825 ASXL1Q8IXJ9 1541 aa22.3■■□□□ 1.16
CDC42SE1-205ENST00000491825 PRAG1Q86YV5 1406 aa22.3■■□□□ 1.16
CDC42SE1-205ENST00000491825 SETD1AO15047 1707 aaKnown RBP22.29■■□□□ 1.16
CDC42SE1-205ENST00000491825 PTCH1Q13635 1447 aa22.29■■□□□ 1.16
CDC42SE1-205ENST00000491825 SPATA31A6Q5VVP1 1343 aa22.29■■□□□ 1.16
CDC42SE1-205ENST00000491825 VGFO15240 615 aaPredicted RBP22.27■■□□□ 1.16
CDC42SE1-205ENST00000491825 RPGRIP1LQ68CZ1 1315 aa22.27■■□□□ 1.16
CDC42SE1-205ENST00000491825 SHPRHQ149N8 1683 aa22.26■■□□□ 1.15
CDC42SE1-205ENST00000491825 NALCNQ8IZF0 1738 aa22.26■■□□□ 1.15
CDC42SE1-205ENST00000491825 ROBO2Q9HCK4 1378 aa22.25■■□□□ 1.15
CDC42SE1-205ENST00000491825 NHSL1Q5SYE7 1610 aa22.24■■□□□ 1.15
CDC42SE1-205ENST00000491825 FOXD1Q16676 465 aa22.23■■□□□ 1.15
CDC42SE1-205ENST00000491825 PPLO60437 1756 aa22.22■■□□□ 1.15
CDC42SE1-205ENST00000491825 SPATA31E1Q6ZUB1 1445 aa22.21■■□□□ 1.15
CDC42SE1-205ENST00000491825 CCDC144AA2RUR9 1427 aa22.19■■□□□ 1.14
CDC42SE1-205ENST00000491825 C1orf167Q5SNV9 1468 aa22.19■■□□□ 1.14
CDC42SE1-205ENST00000491825 MPHOSPH9Q99550 1183 aa22.16■■□□□ 1.14
CDC42SE1-205ENST00000491825 ADGRF5Q8IZF2 1346 aa22.15■■□□□ 1.14
CDC42SE1-205ENST00000491825 DDX17Q92841 729 aaKnown RBP22.15■■□□□ 1.14
CDC42SE1-205ENST00000491825 LAMC1P11047 1609 aa22.15■■□□□ 1.14
CDC42SE1-205ENST00000491825 MEX3CQ5U5Q3 659 aaKnown RBP22.14■■□□□ 1.13
CDC42SE1-205ENST00000491825 LRRC59Q96AG4 307 aaKnown RBP22.13■■□□□ 1.13
CDC42SE1-205ENST00000491825 PNPLA6Q8IY17 1366 aa22.12■■□□□ 1.13
CDC42SE1-205ENST00000491825 ZNF772Q68DY9 489 aaPredicted RBP22.12■■□□□ 1.13
CDC42SE1-205ENST00000491825 TECPR2O15040 1411 aa22.12■■□□□ 1.13
CDC42SE1-205ENST00000491825 ANKRD30BQ9BXX2 1392 aa22.12■■□□□ 1.13
CDC42SE1-205ENST00000491825 IFT172Q9UG01 1749 aa22.11■■□□□ 1.13
CDC42SE1-205ENST00000491825 PIK3C2GO75747 1445 aa22.1■■□□□ 1.13
CDC42SE1-205ENST00000491825 CDC42BPGQ6DT37 1551 aa22.09■■□□□ 1.13
CDC42SE1-205ENST00000491825 NUTM2BA6NNL0 878 aaPredicted RBP22.09■■□□□ 1.13
CDC42SE1-205ENST00000491825 NUTM2EB1AL46 878 aaPredicted RBP22.09■■□□□ 1.13
CDC42SE1-205ENST00000491825 RGL3Q3MIN7 710 aa22.09■■□□□ 1.13
CDC42SE1-205ENST00000491825 NUTM2AQ8IVF1 878 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms