RNA–Protein interactions for RNA: ENST00000491680.6

LCLAT1-211, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-211ENST00000491680 KDM5AP29375 1690 aaKnown RBP16.41■□□□□ 0.22
LCLAT1-211ENST00000491680 SLC4A1APQ9BWU0 796 aaKnown RBP16.41■□□□□ 0.22
LCLAT1-211ENST00000491680 NEURL4Q96JN8 1562 aa16.4■□□□□ 0.22
LCLAT1-211ENST00000491680 IDI1Q13907 227 aa16.39■□□□□ 0.21
LCLAT1-211ENST00000491680 SLC52A1Q9NWF4 448 aa16.39■□□□□ 0.21
LCLAT1-211ENST00000491680 ANKRD30BQ9BXX2 1392 aa16.38■□□□□ 0.21
LCLAT1-211ENST00000491680 ADGRB3O60242 1522 aa16.38■□□□□ 0.21
LCLAT1-211ENST00000491680 SPHKAPQ2M3C7 1700 aa16.37■□□□□ 0.21
LCLAT1-211ENST00000491680 IQGAP1P46940 1657 aa16.37■□□□□ 0.21
LCLAT1-211ENST00000491680 TIMELESSQ9UNS1 1208 aa16.37■□□□□ 0.21
LCLAT1-211ENST00000491680 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
LCLAT1-211ENST00000491680 MYO5BQ9ULV0 1848 aa16.36■□□□□ 0.21
LCLAT1-211ENST00000491680 SLIT1O75093 1534 aa16.36■□□□□ 0.21
LCLAT1-211ENST00000491680 EID1Q9Y6B2 187 aa16.35■□□□□ 0.21
LCLAT1-211ENST00000491680 MED14O60244 1454 aa16.35■□□□□ 0.21
LCLAT1-211ENST00000491680 SCAF11Q99590 1463 aaKnown RBP16.35■□□□□ 0.21
LCLAT1-211ENST00000491680 ARHGAP23Q9P227 1491 aa16.35■□□□□ 0.21
LCLAT1-211ENST00000491680 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
LCLAT1-211ENST00000491680 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
LCLAT1-211ENST00000491680 TMEM2Q9UHN6 1383 aa16.33■□□□□ 0.21
LCLAT1-211ENST00000491680 ZNF335Q9H4Z2 1342 aaPredicted RBP16.32■□□□□ 0.2
LCLAT1-211ENST00000491680 TMEM131LA2VDJ0 1609 aa16.32■□□□□ 0.2
LCLAT1-211ENST00000491680 LTBP4Q8N2S1 1624 aa16.32■□□□□ 0.2
LCLAT1-211ENST00000491680 LTKP29376 864 aa16.3■□□□□ 0.2
LCLAT1-211ENST00000491680 TRPM2O94759 1503 aa16.28■□□□□ 0.2
LCLAT1-211ENST00000491680 HDGFP51858 240 aaKnown RBP16.27■□□□□ 0.2
LCLAT1-211ENST00000491680 KIF1BO60333 1816 aa16.27■□□□□ 0.2
LCLAT1-211ENST00000491680 PPP1R15AO75807 674 aaPredicted RBP16.27■□□□□ 0.19
LCLAT1-211ENST00000491680 CLTCL1P53675 1640 aa16.26■□□□□ 0.19
LCLAT1-211ENST00000491680 RIMS2Q9UQ26 1411 aa16.26■□□□□ 0.19
LCLAT1-211ENST00000491680 BCANQ96GW7 911 aa16.26■□□□□ 0.19
LCLAT1-211ENST00000491680 TONSLQ96HA7 1378 aa16.25■□□□□ 0.19
LCLAT1-211ENST00000491680 CPS1P31327 1500 aa16.24■□□□□ 0.19
LCLAT1-211ENST00000491680 MYT1Q01538 1121 aa16.24■□□□□ 0.19
LCLAT1-211ENST00000491680 ZFYVE9O95405 1425 aa16.24■□□□□ 0.19
LCLAT1-211ENST00000491680 IQSEC2Q5JU85 1478 aa16.24■□□□□ 0.19
LCLAT1-211ENST00000491680 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
LCLAT1-211ENST00000491680 ZNF326Q5BKZ1 582 aaKnown RBP16.23■□□□□ 0.19
LCLAT1-211ENST00000491680 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
LCLAT1-211ENST00000491680 STRCP1A6NGW2 1772 aa16.21■□□□□ 0.19
LCLAT1-211ENST00000491680 NUTM2DQ5VT03 806 aaPredicted RBP16.2■□□□□ 0.18
LCLAT1-211ENST00000491680 PLEKHG1Q9ULL1 1385 aa16.2■□□□□ 0.18
LCLAT1-211ENST00000491680 SLC26A8Q96RN1 970 aa16.19■□□□□ 0.18
LCLAT1-211ENST00000491680 L3MBTL2Q969R5 705 aa16.19■□□□□ 0.18
LCLAT1-211ENST00000491680 CCDC144AA2RUR9 1427 aa16.17■□□□□ 0.18
LCLAT1-211ENST00000491680 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
LCLAT1-211ENST00000491680 NEXMIFQ5QGS0 1516 aa16.14■□□□□ 0.17
LCLAT1-211ENST00000491680 UBAP1LF5GYI3 381 aa16.14■□□□□ 0.17
LCLAT1-211ENST00000491680 DIP2AQ14689 1571 aa16.14■□□□□ 0.17
LCLAT1-211ENST00000491680 LRRC7Q96NW7 1537 aa16.14■□□□□ 0.17
LCLAT1-211ENST00000491680 CHD2O14647 1828 aaKnown RBP16.13■□□□□ 0.17
LCLAT1-211ENST00000491680 KCNA6P17658 529 aa16.12■□□□□ 0.17
LCLAT1-211ENST00000491680 TBX22Q9Y458 520 aa16.12■□□□□ 0.17
LCLAT1-211ENST00000491680 NWD1Q149M9 1564 aa16.11■□□□□ 0.17
LCLAT1-211ENST00000491680 PPLO60437 1756 aa16.11■□□□□ 0.17
LCLAT1-211ENST00000491680 ADAMTS13Q76LX8 1427 aa16.1■□□□□ 0.17
LCLAT1-211ENST00000491680 XIRP1Q702N8 1843 aaKnown RBP16.1■□□□□ 0.17
LCLAT1-211ENST00000491680 SETBP1Q9Y6X0 1596 aa16.1■□□□□ 0.17
LCLAT1-211ENST00000491680 NRXN3Q9Y4C0 1643 aa16.09■□□□□ 0.17
LCLAT1-211ENST00000491680 RPGRIP1LQ68CZ1 1315 aa16.09■□□□□ 0.17
LCLAT1-211ENST00000491680 NKTRP30414 1462 aaKnown RBP16.09■□□□□ 0.17
LCLAT1-211ENST00000491680 VGFO15240 615 aaPredicted RBP16.08■□□□□ 0.17
LCLAT1-211ENST00000491680 TOM1O60784 492 aa16.08■□□□□ 0.17
LCLAT1-211ENST00000491680 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.17
LCLAT1-211ENST00000491680 PROSER2Q86WR7 435 aaPredicted RBP16.08■□□□□ 0.17
LCLAT1-211ENST00000491680 SPATA31E1Q6ZUB1 1445 aa16.08■□□□□ 0.17
LCLAT1-211ENST00000491680 RGL3Q3MIN7 710 aa16.08■□□□□ 0.16
LCLAT1-211ENST00000491680 PIK3R4Q99570 1358 aa16.06■□□□□ 0.16
LCLAT1-211ENST00000491680 PIP4K2BP78356 416 aa16.05■□□□□ 0.16
LCLAT1-211ENST00000491680 IFT172Q9UG01 1749 aa16.05■□□□□ 0.16
LCLAT1-211ENST00000491680 TMEM94Q12767 1356 aa16.05■□□□□ 0.16
LCLAT1-211ENST00000491680 RBM33Q96EV2 1170 aaKnown RBP16.03■□□□□ 0.16
LCLAT1-211ENST00000491680 AMOTL2Q9Y2J4 779 aa16.02■□□□□ 0.16
LCLAT1-211ENST00000491680 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
LCLAT1-211ENST00000491680 SETD1AO15047 1707 aaKnown RBP16.01■□□□□ 0.15
LCLAT1-211ENST00000491680 C14orf37Q86TY3 774 aa16.01■□□□□ 0.15
LCLAT1-211ENST00000491680 XRN1Q8IZH2 1706 aaKnown RBP16.01■□□□□ 0.15
LCLAT1-211ENST00000491680 DCAF11Q8TEB1 546 aa16.01■□□□□ 0.15
LCLAT1-211ENST00000491680 ALKQ9UM73 1620 aa16.01■□□□□ 0.15
LCLAT1-211ENST00000491680 PTPRUQ92729 1446 aa16■□□□□ 0.15
LCLAT1-211ENST00000491680 METP08581 1390 aa16■□□□□ 0.15
LCLAT1-211ENST00000491680 MSH6P52701 1360 aa16■□□□□ 0.15
LCLAT1-211ENST00000491680 PRAG1Q86YV5 1406 aa15.99■□□□□ 0.15
LCLAT1-211ENST00000491680 ADGRF5Q8IZF2 1346 aa15.98■□□□□ 0.15
LCLAT1-211ENST00000491680 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
LCLAT1-211ENST00000491680 RALGAPBQ86X10 1494 aa15.97■□□□□ 0.15
LCLAT1-211ENST00000491680 NCOA3Q9Y6Q9 1424 aa15.96■□□□□ 0.15
LCLAT1-211ENST00000491680 SUPT16HQ9Y5B9 1047 aaKnown RBP15.95■□□□□ 0.14
LCLAT1-211ENST00000491680 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.94■□□□□ 0.14
LCLAT1-211ENST00000491680 MYOM2P54296 1465 aa15.94■□□□□ 0.14
LCLAT1-211ENST00000491680 MED1Q15648 1581 aaPredicted RBP15.94■□□□□ 0.14
LCLAT1-211ENST00000491680 PIK3C2GO75747 1445 aa15.94■□□□□ 0.14
LCLAT1-211ENST00000491680 LAMC1P11047 1609 aa15.93■□□□□ 0.14
LCLAT1-211ENST00000491680 HSPA5P11021 654 aaKnown RBP15.92■□□□□ 0.14
LCLAT1-211ENST00000491680 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
LCLAT1-211ENST00000491680 HIRIP3Q9BW71 556 aaPredicted RBP15.92■□□□□ 0.14
LCLAT1-211ENST00000491680 ATF3P18847 181 aa15.91■□□□□ 0.14
LCLAT1-211ENST00000491680 HSPA1LP34931 641 aa15.91■□□□□ 0.14
LCLAT1-211ENST00000491680 STAC3Q96MF2 364 aa15.91■□□□□ 0.14
LCLAT1-211ENST00000491680 C19orf44Q9H6X5 657 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms