RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 PPP1R15AO75807 674 aaPredicted RBP28.03■■■□□ 2.08
SMIM4-205ENST00000491607 KCNA6P17658 529 aa28.01■■■□□ 2.07
SMIM4-205ENST00000491607 RIMS2Q9UQ26 1411 aa28.01■■■□□ 2.07
SMIM4-205ENST00000491607 TMEM131LA2VDJ0 1609 aa28■■■□□ 2.07
SMIM4-205ENST00000491607 HDGFP51858 240 aaKnown RBP28■■■□□ 2.07
SMIM4-205ENST00000491607 ZFYVE9O95405 1425 aa28■■■□□ 2.07
SMIM4-205ENST00000491607 MYO5BQ9ULV0 1848 aa27.99■■■□□ 2.07
SMIM4-205ENST00000491607 TMEM94Q12767 1356 aa27.99■■■□□ 2.07
SMIM4-205ENST00000491607 XIRP1Q702N8 1843 aaKnown RBP27.98■■■□□ 2.07
SMIM4-205ENST00000491607 PLEKHG1Q9ULL1 1385 aa27.97■■■□□ 2.07
SMIM4-205ENST00000491607 PROSER2Q86WR7 435 aaPredicted RBP27.96■■■□□ 2.07
SMIM4-205ENST00000491607 RBM33Q96EV2 1170 aaKnown RBP27.95■■■□□ 2.06
SMIM4-205ENST00000491607 RRBP1Q9P2E9 1410 aaKnown RBP27.94■■■□□ 2.06
SMIM4-205ENST00000491607 MED1Q15648 1581 aaPredicted RBP27.94■■■□□ 2.06
SMIM4-205ENST00000491607 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.93■■■□□ 2.06
SMIM4-205ENST00000491607 NWD1Q149M9 1564 aa27.92■■■□□ 2.06
SMIM4-205ENST00000491607 NKTRP30414 1462 aaKnown RBP27.92■■■□□ 2.06
SMIM4-205ENST00000491607 SOCS7O14512 581 aa27.92■■■□□ 2.06
SMIM4-205ENST00000491607 NUTM2DQ5VT03 806 aaPredicted RBP27.92■■■□□ 2.06
SMIM4-205ENST00000491607 TBX22Q9Y458 520 aa27.85■■■□□ 2.05
SMIM4-205ENST00000491607 MSH6P52701 1360 aa27.83■■■□□ 2.05
SMIM4-205ENST00000491607 NAIPQ13075 1403 aa27.83■■■□□ 2.05
SMIM4-205ENST00000491607 SPHKAPQ2M3C7 1700 aa27.82■■■□□ 2.04
SMIM4-205ENST00000491607 PHF23Q9BUL5 403 aaPredicted RBP27.82■■■□□ 2.04
SMIM4-205ENST00000491607 FAM135BQ49AJ0 1406 aa27.82■■■□□ 2.04
SMIM4-205ENST00000491607 CHD2O14647 1828 aaKnown RBP27.81■■■□□ 2.04
SMIM4-205ENST00000491607 ADAMTS13Q76LX8 1427 aa27.8■■■□□ 2.04
SMIM4-205ENST00000491607 DIP2AQ14689 1571 aa27.79■■■□□ 2.04
SMIM4-205ENST00000491607 ZNF326Q5BKZ1 582 aaKnown RBP27.78■■■□□ 2.04
SMIM4-205ENST00000491607 ROBO1Q9Y6N7 1651 aa27.77■■■□□ 2.04
SMIM4-205ENST00000491607 C14orf37Q86TY3 774 aa27.76■■■□□ 2.03
SMIM4-205ENST00000491607 TRIM52Q96A61 297 aa27.75■■■□□ 2.03
SMIM4-205ENST00000491607 PIK3R4Q99570 1358 aa27.73■■■□□ 2.03
SMIM4-205ENST00000491607 TRPM2O94759 1503 aa27.73■■■□□ 2.03
SMIM4-205ENST00000491607 HFM1A2PYH4 1435 aa27.73■■■□□ 2.03
SMIM4-205ENST00000491607 SLAIN2Q9P270 581 aa27.72■■■□□ 2.03
SMIM4-205ENST00000491607 CLTCL1P53675 1640 aa27.7■■■□□ 2.03
SMIM4-205ENST00000491607 NCOA3Q9Y6Q9 1424 aa27.69■■■□□ 2.02
SMIM4-205ENST00000491607 AMOTL2Q9Y2J4 779 aa27.69■■■□□ 2.02
SMIM4-205ENST00000491607 PTPRUQ92729 1446 aa27.66■■■□□ 2.02
SMIM4-205ENST00000491607 SETBP1Q9Y6X0 1596 aa27.65■■■□□ 2.02
SMIM4-205ENST00000491607 NRXN3Q9Y4C0 1643 aa27.65■■■□□ 2.02
SMIM4-205ENST00000491607 SLC4A1APQ9BWU0 796 aaKnown RBP27.64■■■□□ 2.02
SMIM4-205ENST00000491607 ATF3P18847 181 aa27.63■■■□□ 2.01
SMIM4-205ENST00000491607 C19orf44Q9H6X5 657 aa27.63■■■□□ 2.01
SMIM4-205ENST00000491607 NEXMIFQ5QGS0 1516 aa27.62■■■□□ 2.01
SMIM4-205ENST00000491607 CADPS2Q86UW7 1296 aa27.62■■■□□ 2.01
SMIM4-205ENST00000491607 KIF1BO60333 1816 aa27.6■■■□□ 2.01
SMIM4-205ENST00000491607 PHLPP1O60346 1717 aa27.6■■■□□ 2.01
SMIM4-205ENST00000491607 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.6■■■□□ 2.01
SMIM4-205ENST00000491607 METP08581 1390 aa27.59■■■□□ 2.01
SMIM4-205ENST00000491607 XRN1Q8IZH2 1706 aaKnown RBP27.57■■■□□ 2
SMIM4-205ENST00000491607 RGS17Q9UGC6 210 aaPredicted RBP27.53■■■□□ 2
SMIM4-205ENST00000491607 JCADQ9P266 1359 aa27.52■■■□□ 2
SMIM4-205ENST00000491607 VGFO15240 615 aaPredicted RBP27.52■■■□□ 2
SMIM4-205ENST00000491607 FOXD1Q16676 465 aa27.52■■■□□ 2
SMIM4-205ENST00000491607 COL16A1Q07092 1604 aaPredicted RBP27.5■■□□□ 1.99
SMIM4-205ENST00000491607 DCCP43146 1447 aa27.5■■□□□ 1.99
SMIM4-205ENST00000491607 RPGRIP1LQ68CZ1 1315 aa27.47■■□□□ 1.99
SMIM4-205ENST00000491607 BRINP3Q76B58 766 aa27.46■■□□□ 1.99
SMIM4-205ENST00000491607 AHDC1Q5TGY3 1603 aaPredicted RBP27.45■■□□□ 1.99
SMIM4-205ENST00000491607 CCDC144AA2RUR9 1427 aa27.43■■□□□ 1.98
SMIM4-205ENST00000491607 ADGRL3Q9HAR2 1447 aa27.43■■□□□ 1.98
SMIM4-205ENST00000491607 MPHOSPH9Q99550 1183 aa27.43■■□□□ 1.98
SMIM4-205ENST00000491607 MST1RQ04912 1400 aa27.42■■□□□ 1.98
SMIM4-205ENST00000491607 ASXL1Q8IXJ9 1541 aa27.41■■□□□ 1.98
SMIM4-205ENST00000491607 PPLO60437 1756 aa27.4■■□□□ 1.98
SMIM4-205ENST00000491607 POTEAQ6S8J7 498 aa27.4■■□□□ 1.98
SMIM4-205ENST00000491607 SETD1AO15047 1707 aaKnown RBP27.39■■□□□ 1.98
SMIM4-205ENST00000491607 NALCNQ8IZF0 1738 aa27.39■■□□□ 1.98
SMIM4-205ENST00000491607 SPATA31A6Q5VVP1 1343 aa27.39■■□□□ 1.97
SMIM4-205ENST00000491607 PTCH1Q13635 1447 aa27.38■■□□□ 1.97
SMIM4-205ENST00000491607 RGL3Q3MIN7 710 aa27.37■■□□□ 1.97
SMIM4-205ENST00000491607 MEX3CQ5U5Q3 659 aaKnown RBP27.37■■□□□ 1.97
SMIM4-205ENST00000491607 ROBO2Q9HCK4 1378 aa27.36■■□□□ 1.97
SMIM4-205ENST00000491607 LRP6O75581 1613 aa27.35■■□□□ 1.97
SMIM4-205ENST00000491607 SHPRHQ149N8 1683 aa27.34■■□□□ 1.97
SMIM4-205ENST00000491607 SETD5Q9C0A6 1442 aa27.33■■□□□ 1.96
SMIM4-205ENST00000491607 ADGRF5Q8IZF2 1346 aa27.32■■□□□ 1.96
SMIM4-205ENST00000491607 SPATA31E1Q6ZUB1 1445 aa27.32■■□□□ 1.96
SMIM4-205ENST00000491607 NHSL1Q5SYE7 1610 aa27.3■■□□□ 1.96
SMIM4-205ENST00000491607 ACIN1Q9UKV3 1341 aaKnown RBP27.3■■□□□ 1.96
SMIM4-205ENST00000491607 NUTM2BA6NNL0 878 aaPredicted RBP27.29■■□□□ 1.96
SMIM4-205ENST00000491607 NUTM2EB1AL46 878 aaPredicted RBP27.29■■□□□ 1.96
SMIM4-205ENST00000491607 NUTM2AQ8IVF1 878 aaPredicted RBP27.29■■□□□ 1.96
SMIM4-205ENST00000491607 DDX17Q92841 729 aaKnown RBP27.29■■□□□ 1.96
SMIM4-205ENST00000491607 PRAG1Q86YV5 1406 aa27.29■■□□□ 1.96
SMIM4-205ENST00000491607 C1orf167Q5SNV9 1468 aa27.28■■□□□ 1.96
SMIM4-205ENST00000491607 ANKRD30BQ9BXX2 1392 aa27.28■■□□□ 1.96
SMIM4-205ENST00000491607 LRRC59Q96AG4 307 aaKnown RBP27.27■■□□□ 1.96
SMIM4-205ENST00000491607 IFT172Q9UG01 1749 aa27.24■■□□□ 1.95
SMIM4-205ENST00000491607 STK26Q9P289 416 aa27.24■■□□□ 1.95
SMIM4-205ENST00000491607 ZNF772Q68DY9 489 aaPredicted RBP27.23■■□□□ 1.95
SMIM4-205ENST00000491607 RAB3GAP2Q9H2M9 1393 aa27.22■■□□□ 1.95
SMIM4-205ENST00000491607 ORAI2Q96SN7 254 aa27.22■■□□□ 1.95
SMIM4-205ENST00000491607 PIK3C2GO75747 1445 aa27.19■■□□□ 1.94
SMIM4-205ENST00000491607 TMEM132EQ6IEE7 984 aa27.19■■□□□ 1.94
SMIM4-205ENST00000491607 LRPPRCP42704 1394 aaKnown RBP27.18■■□□□ 1.94
SMIM4-205ENST00000491607 PNPLA6Q8IY17 1366 aa27.18■■□□□ 1.94
SMIM4-205ENST00000491607 WAPLQ7Z5K2 1190 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms