RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 SLC26A8Q96RN1 970 aa16.3■□□□□ 0.2
PCYT1A-216ENST00000491544 TRPC5Q9UL62 973 aaPredicted RBP16.3■□□□□ 0.2
PCYT1A-216ENST00000491544 ATRNO75882 1429 aa16.29■□□□□ 0.2
PCYT1A-216ENST00000491544 TET3O43151 1660 aa16.29■□□□□ 0.2
PCYT1A-216ENST00000491544 C1QTNF8P60827 252 aa16.28■□□□□ 0.2
PCYT1A-216ENST00000491544 USP21Q9UK80 565 aa16.28■□□□□ 0.2
PCYT1A-216ENST00000491544 TMEM2Q9UHN6 1383 aa16.26■□□□□ 0.19
PCYT1A-216ENST00000491544 GPATCH8Q9UKJ3 1502 aaKnown RBP16.26■□□□□ 0.19
PCYT1A-216ENST00000491544 BRINP3Q76B58 766 aa16.26■□□□□ 0.19
PCYT1A-216ENST00000491544 ZNF784Q8NCA9 323 aaPredicted RBP16.26■□□□□ 0.19
PCYT1A-216ENST00000491544 PNPLA6Q8IY17 1366 aa16.26■□□□□ 0.19
PCYT1A-216ENST00000491544 ADAMTS2O95450 1211 aa16.25■□□□□ 0.19
PCYT1A-216ENST00000491544 RTEL1-TNFRSF6BF6WH68 1400 aa16.25■□□□□ 0.19
PCYT1A-216ENST00000491544 CAMSAP2Q08AD1 1489 aa16.24■□□□□ 0.19
PCYT1A-216ENST00000491544 CCDC18Q5T9S5 1454 aa16.23■□□□□ 0.19
PCYT1A-216ENST00000491544 SF3B2Q13435 895 aaKnown RBP16.23■□□□□ 0.19
PCYT1A-216ENST00000491544 CADPS2Q86UW7 1296 aa16.22■□□□□ 0.19
PCYT1A-216ENST00000491544 UTRNP46939 3433 aa16.22■□□□□ 0.19
PCYT1A-216ENST00000491544 NCOA3Q9Y6Q9 1424 aa16.21■□□□□ 0.19
PCYT1A-216ENST00000491544 ASXL1Q8IXJ9 1541 aa16.21■□□□□ 0.19
PCYT1A-216ENST00000491544 MROH1Q8NDA8 1641 aa16.2■□□□□ 0.18
PCYT1A-216ENST00000491544 LRRC59Q96AG4 307 aaKnown RBP16.2■□□□□ 0.18
PCYT1A-216ENST00000491544 UNC13BO14795 1591 aa16.2■□□□□ 0.18
PCYT1A-216ENST00000491544 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
PCYT1A-216ENST00000491544 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
PCYT1A-216ENST00000491544 ATF3P18847 181 aa16.18■□□□□ 0.18
PCYT1A-216ENST00000491544 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
PCYT1A-216ENST00000491544 R3HDM1Q15032 1099 aaKnown RBP16.17■□□□□ 0.18
PCYT1A-216ENST00000491544 MBD5Q9P267 1494 aa16.16■□□□□ 0.18
PCYT1A-216ENST00000491544 APLP2Q06481 763 aa16.16■□□□□ 0.18
PCYT1A-216ENST00000491544 CFDP1Q9UEE9 299 aaPredicted RBP16.16■□□□□ 0.18
PCYT1A-216ENST00000491544 PIK3C2BO00750 1634 aa16.15■□□□□ 0.18
PCYT1A-216ENST00000491544 C19orf44Q9H6X5 657 aa16.14■□□□□ 0.17
PCYT1A-216ENST00000491544 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
PCYT1A-216ENST00000491544 EFCAB6Q5THR3 1501 aa16.12■□□□□ 0.17
PCYT1A-216ENST00000491544 EHBP1L1Q8N3D4 1523 aa16.12■□□□□ 0.17
PCYT1A-216ENST00000491544 ZNF644Q9H582 1327 aaPredicted RBP16.11■□□□□ 0.17
PCYT1A-216ENST00000491544 MTUS2Q5JR59 1369 aa16.11■□□□□ 0.17
PCYT1A-216ENST00000491544 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
PCYT1A-216ENST00000491544 CHD2O14647 1828 aaKnown RBP16.1■□□□□ 0.17
PCYT1A-216ENST00000491544 PPARGC1BQ86YN6 1023 aaKnown RBP16.1■□□□□ 0.17
PCYT1A-216ENST00000491544 GJD4Q96KN9 370 aaPredicted RBP16.1■□□□□ 0.17
PCYT1A-216ENST00000491544 SPHKAPQ2M3C7 1700 aa16.09■□□□□ 0.17
PCYT1A-216ENST00000491544 BAG6P46379 1132 aa16.09■□□□□ 0.17
PCYT1A-216ENST00000491544 DDX17Q92841 729 aaKnown RBP16.09■□□□□ 0.17
PCYT1A-216ENST00000491544 KANK4Q5T7N3 995 aaPredicted RBP16.08■□□□□ 0.16
PCYT1A-216ENST00000491544 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
PCYT1A-216ENST00000491544 BCANQ96GW7 911 aa16.07■□□□□ 0.16
PCYT1A-216ENST00000491544 CCNB3Q8WWL7 1395 aa16.06■□□□□ 0.16
PCYT1A-216ENST00000491544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.165e-9■■■□□ 18.9
PCYT1A-216ENST00000491544 MST1RQ04912 1400 aa16.05■□□□□ 0.16
PCYT1A-216ENST00000491544 SLC34A2O95436 690 aa16.05■□□□□ 0.16
PCYT1A-216ENST00000491544 CAMTA1Q9Y6Y1 1673 aa16.05■□□□□ 0.16
PCYT1A-216ENST00000491544 GLI3P10071 1580 aa16.04■□□□□ 0.16
PCYT1A-216ENST00000491544 RALGAPBQ86X10 1494 aa16.04■□□□□ 0.16
PCYT1A-216ENST00000491544 DCCP43146 1447 aa16.04■□□□□ 0.16
PCYT1A-216ENST00000491544 NINLQ9Y2I6 1382 aa16.04■□□□□ 0.16
PCYT1A-216ENST00000491544 CEP152O94986 1710 aa16.04■□□□□ 0.16
PCYT1A-216ENST00000491544 CFAP65Q6ZU64 1925 aaKnown RBP16.04■□□□□ 0.16
PCYT1A-216ENST00000491544 BRWD3Q6RI45 1802 aa16.03■□□□□ 0.16
PCYT1A-216ENST00000491544 CCDC141Q6ZP82 1450 aa16.02■□□□□ 0.15
PCYT1A-216ENST00000491544 ARHGAP31Q2M1Z3 1444 aa16.02■□□□□ 0.15
PCYT1A-216ENST00000491544 EN1Q05925 392 aaPredicted RBP16.01■□□□□ 0.15
PCYT1A-216ENST00000491544 PLEKHG1Q9ULL1 1385 aa16■□□□□ 0.15
PCYT1A-216ENST00000491544 PPP1R1BQ9UD71 204 aaPredicted RBP15.99■□□□□ 0.15
PCYT1A-216ENST00000491544 SEPT12Q8IYM1 358 aa15.98■□□□□ 0.15
PCYT1A-216ENST00000491544 IDI1Q13907 227 aa15.97■□□□□ 0.15
PCYT1A-216ENST00000491544 ADGRB3O60242 1522 aa15.96■□□□□ 0.15
PCYT1A-216ENST00000491544 MYOM2P54296 1465 aa15.96■□□□□ 0.14
PCYT1A-216ENST00000491544 COL22A1Q8NFW1 1626 aaPredicted RBP15.95■□□□□ 0.14
PCYT1A-216ENST00000491544 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.95■□□□□ 0.14
PCYT1A-216ENST00000491544 GIGYF1O75420 1035 aaPredicted RBP15.95■□□□□ 0.14
PCYT1A-216ENST00000491544 PPP1R15AO75807 674 aaPredicted RBP15.95■□□□□ 0.14
PCYT1A-216ENST00000491544 TBX22Q9Y458 520 aa15.95■□□□□ 0.14
PCYT1A-216ENST00000491544 KRT27Q7Z3Y8 459 aa15.94■□□□□ 0.14
PCYT1A-216ENST00000491544 EIF2AK4Q9P2K8 1649 aaKnown RBP15.94■□□□□ 0.14
PCYT1A-216ENST00000491544 DISP2A7MBM2 1401 aa15.93■□□□□ 0.14
PCYT1A-216ENST00000491544 ZFYVE9O95405 1425 aa15.93■□□□□ 0.14
PCYT1A-216ENST00000491544 SOS2Q07890 1332 aaPredicted RBP15.92■□□□□ 0.14
PCYT1A-216ENST00000491544 LAMC1P11047 1609 aa15.91■□□□□ 0.14
PCYT1A-216ENST00000491544 UNC5CLQ8IV45 518 aa15.91■□□□□ 0.14
PCYT1A-216ENST00000491544 MYOM3Q5VTT5 1437 aa15.9■□□□□ 0.14
PCYT1A-216ENST00000491544 TRPM2O94759 1503 aa15.89■□□□□ 0.13
PCYT1A-216ENST00000491544 ADAMTS13Q76LX8 1427 aa15.89■□□□□ 0.13
PCYT1A-216ENST00000491544 EZH2Q15910 746 aaKnown RBP15.89■□□□□ 0.13
PCYT1A-216ENST00000491544 SPON1Q9HCB6 807 aa15.89■□□□□ 0.13
PCYT1A-216ENST00000491544 PIK3R4Q99570 1358 aa15.88■□□□□ 0.13
PCYT1A-216ENST00000491544 SLIT2O94813 1529 aa15.88■□□□□ 0.13
PCYT1A-216ENST00000491544 RGPD1P0DJD0 1748 aa15.88■□□□□ 0.13
PCYT1A-216ENST00000491544 MARF1Q9Y4F3 1742 aaKnown RBP15.88■□□□□ 0.13
PCYT1A-216ENST00000491544 CAPN15O75808 1086 aa15.87■□□□□ 0.13
PCYT1A-216ENST00000491544 PTPN23Q9H3S7 1636 aa15.86■□□□□ 0.13
PCYT1A-216ENST00000491544 ONECUT3O60422 494 aaPredicted RBP15.86■□□□□ 0.13
PCYT1A-216ENST00000491544 PTPRUQ92729 1446 aa15.85■□□□□ 0.13
PCYT1A-216ENST00000491544 AMOTL2Q9Y2J4 779 aa15.85■□□□□ 0.13
PCYT1A-216ENST00000491544 RIMS2Q9UQ26 1411 aa15.85■□□□□ 0.13
PCYT1A-216ENST00000491544 KCNQ2O43526 872 aa15.84■□□□□ 0.13
PCYT1A-216ENST00000491544 RSPH4AQ5TD94 716 aa15.84■□□□□ 0.13
PCYT1A-216ENST00000491544 TNS1Q9HBL0 1735 aaKnown RBP15.83■□□□□ 0.13
PCYT1A-216ENST00000491544 PCDH10Q9P2E7 1040 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms