RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 DISP3Q9P2K9 1392 aa20.46■□□□□ 0.87
CDK9-204ENST00000491521 TMEM131LA2VDJ0 1609 aa20.45■□□□□ 0.87
CDK9-204ENST00000491521 NUTM2DQ5VT03 806 aaPredicted RBP20.45■□□□□ 0.86
CDK9-204ENST00000491521 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
CDK9-204ENST00000491521 PCGF6Q9BYE7 350 aa20.44■□□□□ 0.86
CDK9-204ENST00000491521 HSPA1LP34931 641 aa20.42■□□□□ 0.86
CDK9-204ENST00000491521 NAIPQ13075 1403 aa20.42■□□□□ 0.86
CDK9-204ENST00000491521 ZFYVE9O95405 1425 aa20.41■□□□□ 0.86
CDK9-204ENST00000491521 XIRP1Q702N8 1843 aaKnown RBP20.4■□□□□ 0.86
CDK9-204ENST00000491521 TRIM52Q96A61 297 aa20.4■□□□□ 0.86
CDK9-204ENST00000491521 RBM33Q96EV2 1170 aaKnown RBP20.4■□□□□ 0.86
CDK9-204ENST00000491521 ALKQ9UM73 1620 aa20.4■□□□□ 0.86
CDK9-204ENST00000491521 SPHKAPQ2M3C7 1700 aa20.39■□□□□ 0.86
CDK9-204ENST00000491521 HDGFP51858 240 aaKnown RBP20.39■□□□□ 0.85
CDK9-204ENST00000491521 KCNA6P17658 529 aa20.38■□□□□ 0.85
CDK9-204ENST00000491521 PLEKHG1Q9ULL1 1385 aa20.37■□□□□ 0.85
CDK9-204ENST00000491521 PROSER2Q86WR7 435 aaPredicted RBP20.37■□□□□ 0.85
CDK9-204ENST00000491521 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.36■□□□□ 0.85
CDK9-204ENST00000491521 TMEM94Q12767 1356 aa20.35■□□□□ 0.85
CDK9-204ENST00000491521 ZNF326Q5BKZ1 582 aaKnown RBP20.34■□□□□ 0.85
CDK9-204ENST00000491521 HFM1A2PYH4 1435 aa20.34■□□□□ 0.85
CDK9-204ENST00000491521 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
CDK9-204ENST00000491521 CLTCL1P53675 1640 aa20.3■□□□□ 0.84
CDK9-204ENST00000491521 CHD2O14647 1828 aaKnown RBP20.3■□□□□ 0.84
CDK9-204ENST00000491521 ILDR2Q71H61 639 aa20.29■□□□□ 0.84
CDK9-204ENST00000491521 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
CDK9-204ENST00000491521 SLC4A1APQ9BWU0 796 aaKnown RBP20.28■□□□□ 0.84
CDK9-204ENST00000491521 TBX22Q9Y458 520 aa20.28■□□□□ 0.84
CDK9-204ENST00000491521 TRPM2O94759 1503 aa20.27■□□□□ 0.83
CDK9-204ENST00000491521 ADAMTS13Q76LX8 1427 aa20.27■□□□□ 0.83
CDK9-204ENST00000491521 KIF1BO60333 1816 aa20.25■□□□□ 0.83
CDK9-204ENST00000491521 C14orf37Q86TY3 774 aa20.25■□□□□ 0.83
CDK9-204ENST00000491521 DIP2AQ14689 1571 aa20.25■□□□□ 0.83
CDK9-204ENST00000491521 MSH6P52701 1360 aa20.24■□□□□ 0.83
CDK9-204ENST00000491521 MED1Q15648 1581 aaPredicted RBP20.23■□□□□ 0.83
CDK9-204ENST00000491521 FOXD1Q16676 465 aa20.23■□□□□ 0.83
CDK9-204ENST00000491521 ROBO1Q9Y6N7 1651 aa20.2■□□□□ 0.82
CDK9-204ENST00000491521 NRXN3Q9Y4C0 1643 aa20.2■□□□□ 0.82
CDK9-204ENST00000491521 NEXMIFQ5QGS0 1516 aa20.19■□□□□ 0.82
CDK9-204ENST00000491521 AMOTL2Q9Y2J4 779 aa20.19■□□□□ 0.82
CDK9-204ENST00000491521 PTPRUQ92729 1446 aa20.19■□□□□ 0.82
CDK9-204ENST00000491521 FAM135BQ49AJ0 1406 aa20.18■□□□□ 0.82
CDK9-204ENST00000491521 SETBP1Q9Y6X0 1596 aa20.17■□□□□ 0.82
CDK9-204ENST00000491521 PIK3R4Q99570 1358 aa20.17■□□□□ 0.82
CDK9-204ENST00000491521 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
CDK9-204ENST00000491521 SLAIN2Q9P270 581 aa20.16■□□□□ 0.82
CDK9-204ENST00000491521 METP08581 1390 aa20.14■□□□□ 0.81
CDK9-204ENST00000491521 MPHOSPH9Q99550 1183 aa20.13■□□□□ 0.81
CDK9-204ENST00000491521 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.13■□□□□ 0.81
CDK9-204ENST00000491521 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
CDK9-204ENST00000491521 ATF3P18847 181 aa20.12■□□□□ 0.81
CDK9-204ENST00000491521 XRN1Q8IZH2 1706 aaKnown RBP20.11■□□□□ 0.81
CDK9-204ENST00000491521 C19orf44Q9H6X5 657 aa20.1■□□□□ 0.81
CDK9-204ENST00000491521 PHLPP1O60346 1717 aa20.1■□□□□ 0.81
CDK9-204ENST00000491521 NCOA3Q9Y6Q9 1424 aa20.1■□□□□ 0.81
CDK9-204ENST00000491521 VGFO15240 615 aaPredicted RBP20.09■□□□□ 0.81
CDK9-204ENST00000491521 RGL3Q3MIN7 710 aa20.09■□□□□ 0.81
CDK9-204ENST00000491521 CCDC144AA2RUR9 1427 aa20.09■□□□□ 0.81
CDK9-204ENST00000491521 PPLO60437 1756 aa20.08■□□□□ 0.81
CDK9-204ENST00000491521 SOCS7O14512 581 aa20.08■□□□□ 0.81
CDK9-204ENST00000491521 CADPS2Q86UW7 1296 aa20.08■□□□□ 0.81
CDK9-204ENST00000491521 RPGRIP1LQ68CZ1 1315 aa20.06■□□□□ 0.8
CDK9-204ENST00000491521 RAB3GAP2Q9H2M9 1393 aa20.06■□□□□ 0.8
CDK9-204ENST00000491521 SETD1AO15047 1707 aaKnown RBP20.03■□□□□ 0.8
CDK9-204ENST00000491521 ADGRF5Q8IZF2 1346 aa20.01■□□□□ 0.79
CDK9-204ENST00000491521 NALCNQ8IZF0 1738 aa20■□□□□ 0.79
CDK9-204ENST00000491521 HRCP23327 699 aa20■□□□□ 0.79
CDK9-204ENST00000491521 SPATA31E1Q6ZUB1 1445 aa19.99■□□□□ 0.79
CDK9-204ENST00000491521 COL16A1Q07092 1604 aaPredicted RBP19.98■□□□□ 0.79
CDK9-204ENST00000491521 ROBO2Q9HCK4 1378 aa19.98■□□□□ 0.79
CDK9-204ENST00000491521 BRINP3Q76B58 766 aa19.98■□□□□ 0.79
CDK9-204ENST00000491521 DCCP43146 1447 aa19.98■□□□□ 0.79
CDK9-204ENST00000491521 ADGRL3Q9HAR2 1447 aa19.98■□□□□ 0.79
CDK9-204ENST00000491521 JCADQ9P266 1359 aa19.97■□□□□ 0.79
CDK9-204ENST00000491521 ACIN1Q9UKV3 1341 aaKnown RBP19.97■□□□□ 0.79
CDK9-204ENST00000491521 IFT172Q9UG01 1749 aa19.96■□□□□ 0.79
CDK9-204ENST00000491521 MST1RQ04912 1400 aa19.96■□□□□ 0.79
CDK9-204ENST00000491521 STK26Q9P289 416 aa19.96■□□□□ 0.79
CDK9-204ENST00000491521 PTCH1Q13635 1447 aa19.95■□□□□ 0.78
CDK9-204ENST00000491521 AHDC1Q5TGY3 1603 aaPredicted RBP19.94■□□□□ 0.78
CDK9-204ENST00000491521 ASXL1Q8IXJ9 1541 aa19.94■□□□□ 0.78
CDK9-204ENST00000491521 ANKRD30BQ9BXX2 1392 aa19.94■□□□□ 0.78
CDK9-204ENST00000491521 RGS17Q9UGC6 210 aaPredicted RBP19.93■□□□□ 0.78
CDK9-204ENST00000491521 TMEM132EQ6IEE7 984 aa19.92■□□□□ 0.78
CDK9-204ENST00000491521 DDX17Q92841 729 aaKnown RBP19.92■□□□□ 0.78
CDK9-204ENST00000491521 MEX3CQ5U5Q3 659 aaKnown RBP19.91■□□□□ 0.78
CDK9-204ENST00000491521 PIK3C2GO75747 1445 aa19.88■□□□□ 0.77
CDK9-204ENST00000491521 NUTM2BA6NNL0 878 aaPredicted RBP19.88■□□□□ 0.77
CDK9-204ENST00000491521 NUTM2EB1AL46 878 aaPredicted RBP19.88■□□□□ 0.77
CDK9-204ENST00000491521 NUTM2AQ8IVF1 878 aaPredicted RBP19.88■□□□□ 0.77
CDK9-204ENST00000491521 CCER1Q8TC90 406 aaPredicted RBP19.88■□□□□ 0.77
CDK9-204ENST00000491521 SHPRHQ149N8 1683 aa19.87■□□□□ 0.77
CDK9-204ENST00000491521 NHSL1Q5SYE7 1610 aa19.87■□□□□ 0.77
CDK9-204ENST00000491521 C1orf167Q5SNV9 1468 aa19.87■□□□□ 0.77
CDK9-204ENST00000491521 WAPLQ7Z5K2 1190 aa19.87■□□□□ 0.77
CDK9-204ENST00000491521 LRP6O75581 1613 aa19.87■□□□□ 0.77
CDK9-204ENST00000491521 POTEAQ6S8J7 498 aa19.86■□□□□ 0.77
CDK9-204ENST00000491521 PRAG1Q86YV5 1406 aa19.85■□□□□ 0.77
CDK9-204ENST00000491521 LRPPRCP42704 1394 aaKnown RBP19.85■□□□□ 0.77
CDK9-204ENST00000491521 SPATA31A6Q5VVP1 1343 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms