RNA–Protein interactions for RNA: ENST00000491446.1

TRIM2-208, Transcript of tripartite motif containing 2, humanhuman

TSL 2

Gene TRIM2, Length 513 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-208ENST00000491446 STAG3Q9UJ98 1225 aa17.45■□□□□ 0.38
TRIM2-208ENST00000491446 SLC52A1Q9NWF4 448 aa17.43■□□□□ 0.38
TRIM2-208ENST00000491446 UNC13BO14795 1591 aa17.43■□□□□ 0.38
TRIM2-208ENST00000491446 MYO5BQ9ULV0 1848 aa17.42■□□□□ 0.38
TRIM2-208ENST00000491446 GCC2Q8IWJ2 1684 aa17.42■□□□□ 0.38
TRIM2-208ENST00000491446 ROCK1Q13464 1354 aa17.39■□□□□ 0.37
TRIM2-208ENST00000491446 ZFYVE9O95405 1425 aa17.38■□□□□ 0.37
TRIM2-208ENST00000491446 NWD1Q149M9 1564 aa17.38■□□□□ 0.37
TRIM2-208ENST00000491446 KCNA6P17658 529 aa17.38■□□□□ 0.37
TRIM2-208ENST00000491446 SLC26A8Q96RN1 970 aa17.38■□□□□ 0.37
TRIM2-208ENST00000491446 TMEM131LA2VDJ0 1609 aa17.38■□□□□ 0.37
TRIM2-208ENST00000491446 E9PCH4 1651 aa17.38■□□□□ 0.37
TRIM2-208ENST00000491446 TMEM94Q12767 1356 aa17.37■□□□□ 0.37
TRIM2-208ENST00000491446 IQGAP3Q86VI3 1631 aa17.36■□□□□ 0.37
TRIM2-208ENST00000491446 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
TRIM2-208ENST00000491446 NKTRP30414 1462 aaKnown RBP17.35■□□□□ 0.37
TRIM2-208ENST00000491446 CHD2O14647 1828 aaKnown RBP17.33■□□□□ 0.37
TRIM2-208ENST00000491446 FAM135BQ49AJ0 1406 aa17.33■□□□□ 0.36
TRIM2-208ENST00000491446 PLEKHG1Q9ULL1 1385 aa17.33■□□□□ 0.36
TRIM2-208ENST00000491446 RIMS2Q9UQ26 1411 aa17.32■□□□□ 0.36
TRIM2-208ENST00000491446 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
TRIM2-208ENST00000491446 ROBO1Q9Y6N7 1651 aa17.3■□□□□ 0.36
TRIM2-208ENST00000491446 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
TRIM2-208ENST00000491446 HDGFP51858 240 aaKnown RBP17.28■□□□□ 0.36
TRIM2-208ENST00000491446 BCANQ96GW7 911 aa17.28■□□□□ 0.36
TRIM2-208ENST00000491446 NUP155O75694 1391 aa17.27■□□□□ 0.35
TRIM2-208ENST00000491446 PPP1R15AO75807 674 aaPredicted RBP17.26■□□□□ 0.35
TRIM2-208ENST00000491446 TBX22Q9Y458 520 aa17.26■□□□□ 0.35
TRIM2-208ENST00000491446 ADAMTS13Q76LX8 1427 aa17.26■□□□□ 0.35
TRIM2-208ENST00000491446 ITGAEP38570 1179 aa17.25■□□□□ 0.35
TRIM2-208ENST00000491446 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRIM2-208ENST00000491446 DIP2AQ14689 1571 aa17.24■□□□□ 0.35
TRIM2-208ENST00000491446 CHGAP10645 457 aaKnown RBP17.24■□□□□ 0.35
TRIM2-208ENST00000491446 PPARGC1BQ86YN6 1023 aaKnown RBP17.24■□□□□ 0.35
TRIM2-208ENST00000491446 MSH6P52701 1360 aa17.24■□□□□ 0.35
TRIM2-208ENST00000491446 SPHKAPQ2M3C7 1700 aa17.23■□□□□ 0.35
TRIM2-208ENST00000491446 RGS17Q9UGC6 210 aaPredicted RBP17.22■□□□□ 0.35
TRIM2-208ENST00000491446 NCOA3Q9Y6Q9 1424 aa17.21■□□□□ 0.35
TRIM2-208ENST00000491446 PIK3R4Q99570 1358 aa17.21■□□□□ 0.35
TRIM2-208ENST00000491446 NUTM2DQ5VT03 806 aaPredicted RBP17.21■□□□□ 0.35
TRIM2-208ENST00000491446 SLAIN2Q9P270 581 aa17.21■□□□□ 0.35
TRIM2-208ENST00000491446 RNF216Q9NWF9 866 aaPredicted RBP17.2■□□□□ 0.34
TRIM2-208ENST00000491446 PHLPP1O60346 1717 aa17.19■□□□□ 0.34
TRIM2-208ENST00000491446 RRBP1Q9P2E9 1410 aaKnown RBP17.19■□□□□ 0.34
TRIM2-208ENST00000491446 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.18■□□□□ 0.34
TRIM2-208ENST00000491446 NRXN3Q9Y4C0 1643 aa17.18■□□□□ 0.34
TRIM2-208ENST00000491446 TRPM2O94759 1503 aa17.18■□□□□ 0.34
TRIM2-208ENST00000491446 PTPRUQ92729 1446 aa17.17■□□□□ 0.34
TRIM2-208ENST00000491446 SETBP1Q9Y6X0 1596 aa17.16■□□□□ 0.34
TRIM2-208ENST00000491446 COL16A1Q07092 1604 aaPredicted RBP17.15■□□□□ 0.34
TRIM2-208ENST00000491446 XRN1Q8IZH2 1706 aaKnown RBP17.15■□□□□ 0.34
TRIM2-208ENST00000491446 CLTCL1P53675 1640 aa17.14■□□□□ 0.33
TRIM2-208ENST00000491446 NAIPQ13075 1403 aa17.14■□□□□ 0.33
TRIM2-208ENST00000491446 AMOTL2Q9Y2J4 779 aa17.13■□□□□ 0.33
TRIM2-208ENST00000491446 C19orf44Q9H6X5 657 aa17.12■□□□□ 0.33
TRIM2-208ENST00000491446 JCADQ9P266 1359 aa17.12■□□□□ 0.33
TRIM2-208ENST00000491446 AHDC1Q5TGY3 1603 aaPredicted RBP17.11■□□□□ 0.33
TRIM2-208ENST00000491446 C14orf37Q86TY3 774 aa17.11■□□□□ 0.33
TRIM2-208ENST00000491446 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
TRIM2-208ENST00000491446 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
TRIM2-208ENST00000491446 KIF1BO60333 1816 aa17.1■□□□□ 0.33
TRIM2-208ENST00000491446 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
TRIM2-208ENST00000491446 POTEAQ6S8J7 498 aa17.1■□□□□ 0.33
TRIM2-208ENST00000491446 DCCP43146 1447 aa17.08■□□□□ 0.32
TRIM2-208ENST00000491446 ATF3P18847 181 aa17.08■□□□□ 0.32
TRIM2-208ENST00000491446 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.32
TRIM2-208ENST00000491446 METP08581 1390 aa17.07■□□□□ 0.32
TRIM2-208ENST00000491446 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
TRIM2-208ENST00000491446 HFM1A2PYH4 1435 aa17.06■□□□□ 0.32
TRIM2-208ENST00000491446 LRP6O75581 1613 aa17.05■□□□□ 0.32
TRIM2-208ENST00000491446 BRINP3Q76B58 766 aa17.04■□□□□ 0.32
TRIM2-208ENST00000491446 SETD1AO15047 1707 aaKnown RBP17.04■□□□□ 0.32
TRIM2-208ENST00000491446 SPATA31A6Q5VVP1 1343 aa17.03■□□□□ 0.32
TRIM2-208ENST00000491446 NALCNQ8IZF0 1738 aa17.03■□□□□ 0.32
TRIM2-208ENST00000491446 MST1RQ04912 1400 aa17.03■□□□□ 0.32
TRIM2-208ENST00000491446 ASXL1Q8IXJ9 1541 aa17.02■□□□□ 0.32
TRIM2-208ENST00000491446 NHSL1Q5SYE7 1610 aa17.02■□□□□ 0.31
TRIM2-208ENST00000491446 ADGRL3Q9HAR2 1447 aa17.01■□□□□ 0.31
TRIM2-208ENST00000491446 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
TRIM2-208ENST00000491446 PPLO60437 1756 aa16.99■□□□□ 0.31
TRIM2-208ENST00000491446 PRAG1Q86YV5 1406 aa16.97■□□□□ 0.31
TRIM2-208ENST00000491446 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
TRIM2-208ENST00000491446 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
TRIM2-208ENST00000491446 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
TRIM2-208ENST00000491446 PTCH1Q13635 1447 aa16.96■□□□□ 0.31
TRIM2-208ENST00000491446 RPGRIP1LQ68CZ1 1315 aa16.96■□□□□ 0.3
TRIM2-208ENST00000491446 LAMC1P11047 1609 aa16.94■□□□□ 0.3
TRIM2-208ENST00000491446 ROBO2Q9HCK4 1378 aa16.93■□□□□ 0.3
TRIM2-208ENST00000491446 MEX3CQ5U5Q3 659 aaKnown RBP16.93■□□□□ 0.3
TRIM2-208ENST00000491446 ZNF772Q68DY9 489 aaPredicted RBP16.92■□□□□ 0.3
TRIM2-208ENST00000491446 C1orf167Q5SNV9 1468 aa16.92■□□□□ 0.3
TRIM2-208ENST00000491446 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
TRIM2-208ENST00000491446 LRRC59Q96AG4 307 aaKnown RBP16.91■□□□□ 0.3
TRIM2-208ENST00000491446 IFT172Q9UG01 1749 aa16.9■□□□□ 0.3
TRIM2-208ENST00000491446 PNPLA6Q8IY17 1366 aa16.89■□□□□ 0.3
TRIM2-208ENST00000491446 NUTM2BA6NNL0 878 aaPredicted RBP16.89■□□□□ 0.29
TRIM2-208ENST00000491446 NUTM2EB1AL46 878 aaPredicted RBP16.89■□□□□ 0.29
TRIM2-208ENST00000491446 NUTM2AQ8IVF1 878 aaPredicted RBP16.89■□□□□ 0.29
TRIM2-208ENST00000491446 SPATA31E1Q6ZUB1 1445 aa16.88■□□□□ 0.29
TRIM2-208ENST00000491446 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms