RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-223ENST00000491295 TMEM94Q12767 1356 aa27.4■■□□□ 1.98
GGA1-223ENST00000491295 PLEKHG1Q9ULL1 1385 aa27.4■■□□□ 1.98
GGA1-223ENST00000491295 PROSER2Q86WR7 435 aaPredicted RBP27.4■■□□□ 1.98
GGA1-223ENST00000491295 TMEM131LA2VDJ0 1609 aa27.38■■□□□ 1.97
GGA1-223ENST00000491295 IQGAP3Q86VI3 1631 aa27.38■■□□□ 1.97
GGA1-223ENST00000491295 PPP1R15AO75807 674 aaPredicted RBP27.38■■□□□ 1.97
GGA1-223ENST00000491295 FAM135BQ49AJ0 1406 aa27.38■■□□□ 1.97
GGA1-223ENST00000491295 RIMS2Q9UQ26 1411 aa27.38■■□□□ 1.97
GGA1-223ENST00000491295 NKTRP30414 1462 aaKnown RBP27.38■■□□□ 1.97
GGA1-223ENST00000491295 NUP155O75694 1391 aa27.37■■□□□ 1.97
GGA1-223ENST00000491295 ITGAEP38570 1179 aa27.36■■□□□ 1.97
GGA1-223ENST00000491295 E9PCH4 1651 aa27.36■■□□□ 1.97
GGA1-223ENST00000491295 TBX22Q9Y458 520 aa27.35■■□□□ 1.97
GGA1-223ENST00000491295 NWD1Q149M9 1564 aa27.35■■□□□ 1.97
GGA1-223ENST00000491295 CHGAP10645 457 aaKnown RBP27.33■■□□□ 1.97
GGA1-223ENST00000491295 MYO5BQ9ULV0 1848 aa27.32■■□□□ 1.96
GGA1-223ENST00000491295 PHF23Q9BUL5 403 aaPredicted RBP27.31■■□□□ 1.96
GGA1-223ENST00000491295 PPARGC1BQ86YN6 1023 aaKnown RBP27.3■■□□□ 1.96
GGA1-223ENST00000491295 MSH6P52701 1360 aa27.28■■□□□ 1.96
GGA1-223ENST00000491295 SENP3Q9H4L4 574 aaPredicted RBP27.28■■□□□ 1.96
GGA1-223ENST00000491295 CHD2O14647 1828 aaKnown RBP27.27■■□□□ 1.96
GGA1-223ENST00000491295 NCOA3Q9Y6Q9 1424 aa27.26■■□□□ 1.95
GGA1-223ENST00000491295 PIK3R4Q99570 1358 aa27.26■■□□□ 1.95
GGA1-223ENST00000491295 RBM33Q96EV2 1170 aaKnown RBP27.24■■□□□ 1.95
GGA1-223ENST00000491295 RRBP1Q9P2E9 1410 aaKnown RBP27.23■■□□□ 1.95
GGA1-223ENST00000491295 DIP2AQ14689 1571 aa27.22■■□□□ 1.95
GGA1-223ENST00000491295 SLAIN2Q9P270 581 aa27.22■■□□□ 1.95
GGA1-223ENST00000491295 ADAMTS13Q76LX8 1427 aa27.21■■□□□ 1.95
GGA1-223ENST00000491295 ROBO1Q9Y6N7 1651 aa27.18■■□□□ 1.94
GGA1-223ENST00000491295 NUTM2DQ5VT03 806 aaPredicted RBP27.18■■□□□ 1.94
GGA1-223ENST00000491295 SPHKAPQ2M3C7 1700 aa27.15■■□□□ 1.94
GGA1-223ENST00000491295 C19orf44Q9H6X5 657 aa27.14■■□□□ 1.94
GGA1-223ENST00000491295 TRPM2O94759 1503 aa27.13■■□□□ 1.93
GGA1-223ENST00000491295 CADPS2Q86UW7 1296 aa27.13■■□□□ 1.93
GGA1-223ENST00000491295 C14orf37Q86TY3 774 aa27.12■■□□□ 1.93
GGA1-223ENST00000491295 NAIPQ13075 1403 aa27.12■■□□□ 1.93
GGA1-223ENST00000491295 AMOTL2Q9Y2J4 779 aa27.11■■□□□ 1.93
GGA1-223ENST00000491295 ZNF326Q5BKZ1 582 aaKnown RBP27.1■■□□□ 1.93
GGA1-223ENST00000491295 ATF3P18847 181 aa27.09■■□□□ 1.93
GGA1-223ENST00000491295 SETBP1Q9Y6X0 1596 aa27.06■■□□□ 1.92
GGA1-223ENST00000491295 RGS17Q9UGC6 210 aaPredicted RBP27.06■■□□□ 1.92
GGA1-223ENST00000491295 JCADQ9P266 1359 aa27.04■■□□□ 1.92
GGA1-223ENST00000491295 HFM1A2PYH4 1435 aa27.04■■□□□ 1.92
GGA1-223ENST00000491295 PTPRUQ92729 1446 aa27.03■■□□□ 1.92
GGA1-223ENST00000491295 PHLPP1O60346 1717 aa27.02■■□□□ 1.92
GGA1-223ENST00000491295 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.02■■□□□ 1.92
GGA1-223ENST00000491295 TRIM52Q96A61 297 aa27.01■■□□□ 1.91
GGA1-223ENST00000491295 DCCP43146 1447 aa27■■□□□ 1.91
GGA1-223ENST00000491295 NRXN3Q9Y4C0 1643 aa27■■□□□ 1.91
GGA1-223ENST00000491295 CLTCL1P53675 1640 aa26.99■■□□□ 1.91
GGA1-223ENST00000491295 KIF1BO60333 1816 aa26.97■■□□□ 1.91
GGA1-223ENST00000491295 VGFO15240 615 aaPredicted RBP26.97■■□□□ 1.91
GGA1-223ENST00000491295 XRN1Q8IZH2 1706 aaKnown RBP26.96■■□□□ 1.91
GGA1-223ENST00000491295 NEXMIFQ5QGS0 1516 aa26.96■■□□□ 1.91
GGA1-223ENST00000491295 SLC4A1APQ9BWU0 796 aaKnown RBP26.96■■□□□ 1.91
GGA1-223ENST00000491295 METP08581 1390 aa26.96■■□□□ 1.91
GGA1-223ENST00000491295 RPGRIP1LQ68CZ1 1315 aa26.95■■□□□ 1.91
GGA1-223ENST00000491295 COL16A1Q07092 1604 aaPredicted RBP26.94■■□□□ 1.9
GGA1-223ENST00000491295 SPATA31A6Q5VVP1 1343 aa26.94■■□□□ 1.9
GGA1-223ENST00000491295 AHDC1Q5TGY3 1603 aaPredicted RBP26.93■■□□□ 1.9
GGA1-223ENST00000491295 BRINP3Q76B58 766 aa26.91■■□□□ 1.9
GGA1-223ENST00000491295 POTEAQ6S8J7 498 aa26.9■■□□□ 1.9
GGA1-223ENST00000491295 ACIN1Q9UKV3 1341 aaKnown RBP26.86■■□□□ 1.89
GGA1-223ENST00000491295 ADGRL3Q9HAR2 1447 aa26.85■■□□□ 1.89
GGA1-223ENST00000491295 MST1RQ04912 1400 aa26.84■■□□□ 1.89
GGA1-223ENST00000491295 SHPRHQ149N8 1683 aa26.82■■□□□ 1.88
GGA1-223ENST00000491295 ASXL1Q8IXJ9 1541 aa26.81■■□□□ 1.88
GGA1-223ENST00000491295 PTCH1Q13635 1447 aa26.81■■□□□ 1.88
GGA1-223ENST00000491295 MEX3CQ5U5Q3 659 aaKnown RBP26.8■■□□□ 1.88
GGA1-223ENST00000491295 LRRC59Q96AG4 307 aaKnown RBP26.8■■□□□ 1.88
GGA1-223ENST00000491295 PRAG1Q86YV5 1406 aa26.8■■□□□ 1.88
GGA1-223ENST00000491295 SETD5Q9C0A6 1442 aa26.8■■□□□ 1.88
GGA1-223ENST00000491295 ZNF772Q68DY9 489 aaPredicted RBP26.79■■□□□ 1.88
GGA1-223ENST00000491295 LRP6O75581 1613 aa26.76■■□□□ 1.87
GGA1-223ENST00000491295 MPHOSPH9Q99550 1183 aa26.76■■□□□ 1.87
GGA1-223ENST00000491295 SETD1AO15047 1707 aaKnown RBP26.76■■□□□ 1.87
GGA1-223ENST00000491295 CCDC144AA2RUR9 1427 aa26.75■■□□□ 1.87
GGA1-223ENST00000491295 PPLO60437 1756 aa26.75■■□□□ 1.87
GGA1-223ENST00000491295 NHSL1Q5SYE7 1610 aa26.75■■□□□ 1.87
GGA1-223ENST00000491295 NALCNQ8IZF0 1738 aa26.74■■□□□ 1.87
GGA1-223ENST00000491295 ROBO2Q9HCK4 1378 aa26.73■■□□□ 1.87
GGA1-223ENST00000491295 FOXD1Q16676 465 aa26.73■■□□□ 1.87
GGA1-223ENST00000491295 ANKRD30BQ9BXX2 1392 aa26.71■■□□□ 1.87
GGA1-223ENST00000491295 C1orf167Q5SNV9 1468 aa26.7■■□□□ 1.87
GGA1-223ENST00000491295 SPATA31E1Q6ZUB1 1445 aa26.68■■□□□ 1.86
GGA1-223ENST00000491295 NUTM2BA6NNL0 878 aaPredicted RBP26.68■■□□□ 1.86
GGA1-223ENST00000491295 NUTM2EB1AL46 878 aaPredicted RBP26.68■■□□□ 1.86
GGA1-223ENST00000491295 NUTM2AQ8IVF1 878 aaPredicted RBP26.68■■□□□ 1.86
GGA1-223ENST00000491295 RGL3Q3MIN7 710 aa26.67■■□□□ 1.86
GGA1-223ENST00000491295 ADGRF5Q8IZF2 1346 aa26.65■■□□□ 1.86
GGA1-223ENST00000491295 LAMC1P11047 1609 aa26.64■■□□□ 1.85
GGA1-223ENST00000491295 PNPLA6Q8IY17 1366 aa26.63■■□□□ 1.85
GGA1-223ENST00000491295 DDX17Q92841 729 aaKnown RBP26.63■■□□□ 1.85
GGA1-223ENST00000491295 SOS2Q07890 1332 aaPredicted RBP26.63■■□□□ 1.85
GGA1-223ENST00000491295 RXRBP28702 533 aa26.62■■□□□ 1.85
GGA1-223ENST00000491295 ORAI2Q96SN7 254 aa26.62■■□□□ 1.85
GGA1-223ENST00000491295 LRPPRCP42704 1394 aaKnown RBP26.59■■□□□ 1.85
GGA1-223ENST00000491295 ABCC11Q96J66 1382 aa26.59■■□□□ 1.85
GGA1-223ENST00000491295 TECPR2O15040 1411 aa26.59■■□□□ 1.85
GGA1-223ENST00000491295 AFF2P51816 1311 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms