RNA–Protein interactions for RNA: ENST00000491066.1

PLXNA3-206, Transcript of plexin A3, humanhuman

TSL 2

Gene PLXNA3, Length 604 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-206ENST00000491066 BCANQ96GW7 911 aa29.05■■■□□ 2.24
PLXNA3-206ENST00000491066 SLAIN2Q9P270 581 aa29.05■■■□□ 2.24
PLXNA3-206ENST00000491066 MSH6P52701 1360 aa29.04■■■□□ 2.24
PLXNA3-206ENST00000491066 HDGFP51858 240 aaKnown RBP29.01■■■□□ 2.23
PLXNA3-206ENST00000491066 ADGRL2O95490 1459 aa29.01■■■□□ 2.23
PLXNA3-206ENST00000491066 RPRD2Q5VT52 1461 aaKnown RBP29.01■■■□□ 2.23
PLXNA3-206ENST00000491066 ZFYVE9O95405 1425 aa28.99■■■□□ 2.23
PLXNA3-206ENST00000491066 PLEKHG1Q9ULL1 1385 aa28.99■■■□□ 2.23
PLXNA3-206ENST00000491066 JCADQ9P266 1359 aa28.96■■■□□ 2.23
PLXNA3-206ENST00000491066 TBX22Q9Y458 520 aa28.95■■■□□ 2.22
PLXNA3-206ENST00000491066 ANKRD50Q9ULJ7 1429 aa28.94■■■□□ 2.22
PLXNA3-206ENST00000491066 PPP1R15AO75807 674 aaPredicted RBP28.94■■■□□ 2.22
PLXNA3-206ENST00000491066 RIMS2Q9UQ26 1411 aa28.94■■■□□ 2.22
PLXNA3-206ENST00000491066 NCOA3Q9Y6Q9 1424 aa28.93■■■□□ 2.22
PLXNA3-206ENST00000491066 CHD2O14647 1828 aaKnown RBP28.92■■■□□ 2.22
PLXNA3-206ENST00000491066 PHLPP1O60346 1717 aa28.91■■■□□ 2.22
PLXNA3-206ENST00000491066 FAM50AQ14320 339 aaKnown RBP28.9■■■□□ 2.22
PLXNA3-206ENST00000491066 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.89■■■□□ 2.22
PLXNA3-206ENST00000491066 TMEM131LA2VDJ0 1609 aa28.88■■■□□ 2.21
PLXNA3-206ENST00000491066 MYO5BQ9ULV0 1848 aa28.85■■■□□ 2.21
PLXNA3-206ENST00000491066 GCC2Q8IWJ2 1684 aa28.84■■■□□ 2.21
PLXNA3-206ENST00000491066 CADPS2Q86UW7 1296 aa28.83■■■□□ 2.21
PLXNA3-206ENST00000491066 C19orf44Q9H6X5 657 aa28.83■■■□□ 2.21
PLXNA3-206ENST00000491066 SPATA31A6Q5VVP1 1343 aa28.83■■■□□ 2.21
PLXNA3-206ENST00000491066 COL16A1Q07092 1604 aaPredicted RBP28.83■■■□□ 2.21
PLXNA3-206ENST00000491066 CHGAP10645 457 aaKnown RBP28.82■■■□□ 2.2
PLXNA3-206ENST00000491066 C14orf37Q86TY3 774 aa28.82■■■□□ 2.2
PLXNA3-206ENST00000491066 ADAMTS13Q76LX8 1427 aa28.82■■■□□ 2.2
PLXNA3-206ENST00000491066 PIK3R4Q99570 1358 aa28.81■■■□□ 2.2
PLXNA3-206ENST00000491066 ATF3P18847 181 aa28.78■■■□□ 2.2
PLXNA3-206ENST00000491066 NUTM2DQ5VT03 806 aaPredicted RBP28.77■■■□□ 2.2
PLXNA3-206ENST00000491066 DIP2AQ14689 1571 aa28.76■■■□□ 2.19
PLXNA3-206ENST00000491066 ZNF772Q68DY9 489 aaPredicted RBP28.76■■■□□ 2.19
PLXNA3-206ENST00000491066 LRP6O75581 1613 aa28.76■■■□□ 2.19
PLXNA3-206ENST00000491066 UNC13BO14795 1591 aa28.75■■■□□ 2.19
PLXNA3-206ENST00000491066 MEX3CQ5U5Q3 659 aaKnown RBP28.74■■■□□ 2.19
PLXNA3-206ENST00000491066 SETD1AO15047 1707 aaKnown RBP28.74■■■□□ 2.19
PLXNA3-206ENST00000491066 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.74■■■□□ 2.19
PLXNA3-206ENST00000491066 AHDC1Q5TGY3 1603 aaPredicted RBP28.73■■■□□ 2.19
PLXNA3-206ENST00000491066 AMOTL2Q9Y2J4 779 aa28.72■■■□□ 2.19
PLXNA3-206ENST00000491066 E9PCH4 1651 aa28.71■■■□□ 2.19
PLXNA3-206ENST00000491066 ROCK1Q13464 1354 aa28.7■■■□□ 2.18
PLXNA3-206ENST00000491066 BRINP3Q76B58 766 aa28.68■■■□□ 2.18
PLXNA3-206ENST00000491066 TRPM2O94759 1503 aa28.68■■■□□ 2.18
PLXNA3-206ENST00000491066 SHPRHQ149N8 1683 aa28.67■■■□□ 2.18
PLXNA3-206ENST00000491066 UPF1Q92900 1129 aaKnown RBP eCLIP28.67■■■□□ 2.18
PLXNA3-206ENST00000491066 PTPRUQ92729 1446 aa28.67■■■□□ 2.18
PLXNA3-206ENST00000491066 IQGAP3Q86VI3 1631 aa28.65■■■□□ 2.18
PLXNA3-206ENST00000491066 NUP155O75694 1391 aa28.64■■■□□ 2.18
PLXNA3-206ENST00000491066 TRIM52Q96A61 297 aa28.64■■■□□ 2.18
PLXNA3-206ENST00000491066 DCCP43146 1447 aa28.63■■■□□ 2.17
PLXNA3-206ENST00000491066 RXRBP28702 533 aa28.62■■■□□ 2.17
PLXNA3-206ENST00000491066 NUTM2BA6NNL0 878 aaPredicted RBP28.59■■■□□ 2.17
PLXNA3-206ENST00000491066 NUTM2EB1AL46 878 aaPredicted RBP28.59■■■□□ 2.17
PLXNA3-206ENST00000491066 NUTM2AQ8IVF1 878 aaPredicted RBP28.59■■■□□ 2.17
PLXNA3-206ENST00000491066 SETD5Q9C0A6 1442 aa28.57■■■□□ 2.16
PLXNA3-206ENST00000491066 ASXL1Q8IXJ9 1541 aa28.55■■■□□ 2.16
PLXNA3-206ENST00000491066 CDK12Q9NYV4 1490 aaPredicted RBP28.55■■■□□ 2.16
PLXNA3-206ENST00000491066 SETBP1Q9Y6X0 1596 aa28.54■■■□□ 2.16
PLXNA3-206ENST00000491066 MST1RQ04912 1400 aa28.54■■■□□ 2.16
PLXNA3-206ENST00000491066 LRRC59Q96AG4 307 aaKnown RBP28.54■■■□□ 2.16
PLXNA3-206ENST00000491066 XRN1Q8IZH2 1706 aaKnown RBP28.53■■■□□ 2.16
PLXNA3-206ENST00000491066 NRXN3Q9Y4C0 1643 aa28.53■■■□□ 2.16
PLXNA3-206ENST00000491066 AFF2P51816 1311 aa28.52■■■□□ 2.16
PLXNA3-206ENST00000491066 METP08581 1390 aa28.51■■■□□ 2.16
PLXNA3-206ENST00000491066 ZNF326Q5BKZ1 582 aaKnown RBP28.5■■■□□ 2.15
PLXNA3-206ENST00000491066 ITGAEP38570 1179 aa28.48■■■□□ 2.15
PLXNA3-206ENST00000491066 NHSL1Q5SYE7 1610 aa28.47■■■□□ 2.15
PLXNA3-206ENST00000491066 ADGRL3Q9HAR2 1447 aa28.44■■■□□ 2.14
PLXNA3-206ENST00000491066 SPHKAPQ2M3C7 1700 aa28.43■■■□□ 2.14
PLXNA3-206ENST00000491066 DDX17Q92841 729 aaKnown RBP28.43■■■□□ 2.14
PLXNA3-206ENST00000491066 C8orf37Q96NL8 207 aa28.43■■■□□ 2.14
PLXNA3-206ENST00000491066 QTRT2Q9H974 415 aaKnown RBP28.43■■■□□ 2.14
PLXNA3-206ENST00000491066 PNPLA6Q8IY17 1366 aa28.42■■■□□ 2.14
PLXNA3-206ENST00000491066 RBM6P78332 1123 aaKnown RBP28.42■■■□□ 2.14
PLXNA3-206ENST00000491066 NEXMIFQ5QGS0 1516 aa28.37■■■□□ 2.13
PLXNA3-206ENST00000491066 RGS12O14924 1447 aa28.35■■■□□ 2.13
PLXNA3-206ENST00000491066 C1orf167Q5SNV9 1468 aa28.35■■■□□ 2.13
PLXNA3-206ENST00000491066 NGLY1Q96IV0 654 aa28.34■■■□□ 2.13
PLXNA3-206ENST00000491066 NALCNQ8IZF0 1738 aa28.33■■■□□ 2.13
PLXNA3-206ENST00000491066 CLTCL1P53675 1640 aa28.32■■■□□ 2.12
PLXNA3-206ENST00000491066 ADAMTS2O95450 1211 aa28.31■■■□□ 2.12
PLXNA3-206ENST00000491066 SOS2Q07890 1332 aaPredicted RBP28.31■■■□□ 2.12
PLXNA3-206ENST00000491066 PTCH1Q13635 1447 aa28.3■■■□□ 2.12
PLXNA3-206ENST00000491066 VGFO15240 615 aaPredicted RBP28.3■■■□□ 2.12
PLXNA3-206ENST00000491066 LAMC1P11047 1609 aa28.29■■■□□ 2.12
PLXNA3-206ENST00000491066 ORAI2Q96SN7 254 aa28.28■■■□□ 2.12
PLXNA3-206ENST00000491066 ROBO2Q9HCK4 1378 aa28.27■■■□□ 2.12
PLXNA3-206ENST00000491066 PPARGC1BQ86YN6 1023 aaKnown RBP28.25■■■□□ 2.11
PLXNA3-206ENST00000491066 USP21Q9UK80 565 aa28.24■■■□□ 2.11
PLXNA3-206ENST00000491066 KIF1BO60333 1816 aa28.24■■■□□ 2.11
PLXNA3-206ENST00000491066 PRAG1Q86YV5 1406 aa28.24■■■□□ 2.11
PLXNA3-206ENST00000491066 RPGRIP1LQ68CZ1 1315 aa28.23■■■□□ 2.11
PLXNA3-206ENST00000491066 FNBP4Q8N3X1 1017 aaPredicted RBP28.23■■■□□ 2.11
PLXNA3-206ENST00000491066 TRPC5Q9UL62 973 aaPredicted RBP28.23■■■□□ 2.11
PLXNA3-206ENST00000491066 ATAD2Q6PL18 1390 aa28.21■■■□□ 2.11
PLXNA3-206ENST00000491066 HFM1A2PYH4 1435 aa28.18■■■□□ 2.1
PLXNA3-206ENST00000491066 NAIPQ13075 1403 aa28.18■■■□□ 2.1
PLXNA3-206ENST00000491066 SRCAPQ6ZRS2 3230 aa28.15■■■□□ 2.1
PLXNA3-206ENST00000491066 ATRNO75882 1429 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms